RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 MYL6BP14649 208 aa10.32□□□□□ -0.76
RAB5B-210ENST00000553116 DNAAF4Q8WXU2 420 aa10.32□□□□□ -0.76
RAB5B-210ENST00000553116 ZNF496Q96IT1 587 aaPredicted RBP10.32□□□□□ -0.76
RAB5B-210ENST00000553116 UBAP1LF5GYI3 381 aa10.32□□□□□ -0.76
RAB5B-210ENST00000553116 UBTFL1P0CB47 393 aaPredicted RBP10.32□□□□□ -0.76
RAB5B-210ENST00000553116 TPRNQ4KMQ1 711 aa10.32□□□□□ -0.76
RAB5B-210ENST00000553116 COL14A1Q05707 1796 aaKnown RBP10.31□□□□□ -0.76
RAB5B-210ENST00000553116 PROSER3Q2NL68 480 aa10.31□□□□□ -0.76
RAB5B-210ENST00000553116 HYPKQ9NX55 129 aa10.31□□□□□ -0.76
RAB5B-210ENST00000553116 PXDNLA1KZ92 1463 aa10.31□□□□□ -0.76
RAB5B-210ENST00000553116 DDX58O95786 925 aaKnown RBP10.31□□□□□ -0.76
RAB5B-210ENST00000553116 ATP10DQ9P241 1426 aa10.31□□□□□ -0.76
RAB5B-210ENST00000553116 A0A0G2JS52 829 aa10.3□□□□□ -0.76
RAB5B-210ENST00000553116 SNRPA1P09661 255 aaKnown RBP10.3□□□□□ -0.76
RAB5B-210ENST00000553116 UPF2Q9HAU5 1272 aaKnown RBP10.3□□□□□ -0.76
RAB5B-210ENST00000553116 MAP3K2Q9Y2U5 619 aa10.3□□□□□ -0.76
RAB5B-210ENST00000553116 CCDC9Q9Y3X0 531 aaKnown RBP10.3□□□□□ -0.76
RAB5B-210ENST00000553116 LRRFIP2Q9Y608 721 aaKnown RBP10.3□□□□□ -0.76
RAB5B-210ENST00000553116 C5P01031 1676 aa10.3□□□□□ -0.76
RAB5B-210ENST00000553116 DDX21Q9NR30 783 aaKnown RBP eCLIP10.3□□□□□ -0.76
RAB5B-210ENST00000553116 RIC3Q7Z5B4 369 aa10.29□□□□□ -0.76
RAB5B-210ENST00000553116 MRC1P22897 1456 aa10.29□□□□□ -0.76
RAB5B-210ENST00000553116 HEG1Q9ULI3 1381 aa10.29□□□□□ -0.76
RAB5B-210ENST00000553116 ERVV-2B6SEH9 535 aa10.29□□□□□ -0.76
RAB5B-210ENST00000553116 EIF5BO60841 1220 aaKnown RBP10.29□□□□□ -0.76
RAB5B-210ENST00000553116 PIP4K2AP48426 406 aaPredicted RBP10.29□□□□□ -0.76
RAB5B-210ENST00000553116 DCTPP1Q9H773 170 aa10.29□□□□□ -0.76
RAB5B-210ENST00000553116 TMOD3Q9NYL9 352 aa10.29□□□□□ -0.76
RAB5B-210ENST00000553116 C9orf78Q9NZ63 289 aaPredicted RBP10.29□□□□□ -0.76
RAB5B-210ENST00000553116 PTCD1O75127 700 aaKnown RBP10.28□□□□□ -0.76
RAB5B-210ENST00000553116 IPO9Q96P70 1041 aaKnown RBP10.28□□□□□ -0.76
RAB5B-210ENST00000553116 COL22A1Q8NFW1 1626 aaPredicted RBP10.28□□□□□ -0.76
RAB5B-210ENST00000553116 N4BP2Q86UW6 1770 aaPredicted RBP10.28□□□□□ -0.76
RAB5B-210ENST00000553116 KSR2Q6VAB6 950 aa10.28□□□□□ -0.76
RAB5B-210ENST00000553116 COL16A1Q07092 1604 aaPredicted RBP10.28□□□□□ -0.76
RAB5B-210ENST00000553116 IL27Q8NEV9 243 aa10.28□□□□□ -0.76
RAB5B-210ENST00000553116 SYTL4Q96C24 671 aaPredicted RBP10.28□□□□□ -0.76
RAB5B-210ENST00000553116 USP44Q9H0E7 712 aa10.28□□□□□ -0.76
RAB5B-210ENST00000553116 USP16Q9Y5T5 823 aa10.28□□□□□ -0.76
RAB5B-210ENST00000553116 ADCY9O60503 1353 aa10.28□□□□□ -0.76
RAB5B-210ENST00000553116 NEXNQ0ZGT2 675 aa10.27□□□□□ -0.76
RAB5B-210ENST00000553116 EXOC6BQ9Y2D4 811 aa10.27□□□□□ -0.76
RAB5B-210ENST00000553116 BEND3Q5T5X7 828 aa10.27□□□□□ -0.77
RAB5B-210ENST00000553116 XAGE3Q8WTP9 111 aa10.27□□□□□ -0.77
RAB5B-210ENST00000553116 SHANK3Q9BYB0 1731 aa10.27□□□□□ -0.77
RAB5B-210ENST00000553116 EXOC5O00471 708 aa10.27□□□□□ -0.77
RAB5B-210ENST00000553116 COPS6Q7L5N1 327 aa10.27□□□□□ -0.77
RAB5B-210ENST00000553116 SMARCA5O60264 1052 aaPredicted RBP10.26□□□□□ -0.77
RAB5B-210ENST00000553116 PLCH1Q4KWH8 1693 aa10.26□□□□□ -0.77
RAB5B-210ENST00000553116 NBPF7P0C2Y1 421 aaPredicted RBP10.26□□□□□ -0.77
RAB5B-210ENST00000553116 NKX1-1Q15270 411 aaPredicted RBP10.26□□□□□ -0.77
RAB5B-210ENST00000553116 CWF19L2Q2TBE0 894 aaKnown RBP10.26□□□□□ -0.77
RAB5B-210ENST00000553116 DDRGK1Q96HY6 314 aa10.26□□□□□ -0.77
RAB5B-210ENST00000553116 ZNF330Q9Y3S2 320 aaPredicted RBP10.26□□□□□ -0.77
RAB5B-210ENST00000553116 PNMA6EA0A0J9YXQ4 647 aa10.25□□□□□ -0.77
RAB5B-210ENST00000553116 MFAP1P55081 439 aaKnown RBP10.25□□□□□ -0.77
RAB5B-210ENST00000553116 TAOK2Q9UL54 1235 aa10.25□□□□□ -0.77
RAB5B-210ENST00000553116 NOP58Q9Y2X3 529 aaKnown RBP10.25□□□□□ -0.77
RAB5B-210ENST00000553116 SRGAP3O43295 1099 aa10.25□□□□□ -0.77
RAB5B-210ENST00000553116 ALDH1L1O75891 902 aa10.25□□□□□ -0.77
RAB5B-210ENST00000553116 SEC24BO95487 1268 aa10.25□□□□□ -0.77
RAB5B-210ENST00000553116 ATP8B2P98198 1209 aa10.25□□□□□ -0.77
RAB5B-210ENST00000553116 PDIA6Q15084 440 aa10.25□□□□□ -0.77
RAB5B-210ENST00000553116 HDAC5Q9UQL6 1122 aa10.25□□□□□ -0.77
RAB5B-210ENST00000553116 LAMB4A4D0S4 1761 aa10.24□□□□□ -0.77
RAB5B-210ENST00000553116 OS9Q13438 667 aaPredicted RBP10.24□□□□□ -0.77
RAB5B-210ENST00000553116 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
RAB5B-210ENST00000553116 PPP1R42Q7Z4L9 355 aa10.24□□□□□ -0.77
RAB5B-210ENST00000553116 C16orf71Q8IYS4 520 aaPredicted RBP10.24□□□□□ -0.77
RAB5B-210ENST00000553116 LINS1Q8NG48 757 aa10.24□□□□□ -0.77
RAB5B-210ENST00000553116 MYD88Q99836 296 aa10.24□□□□□ -0.77
RAB5B-210ENST00000553116 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
RAB5B-210ENST00000553116 BMP2KLQ5H9B9 411 aa10.23□□□□□ -0.77
RAB5B-210ENST00000553116 ARXQ96QS3 562 aa10.23□□□□□ -0.77
RAB5B-210ENST00000553116 LRRCC1Q9C099 1032 aa10.23□□□□□ -0.77
RAB5B-210ENST00000553116 DDB1Q16531 1140 aa10.23□□□□□ -0.77
RAB5B-210ENST00000553116 C8orf37Q96NL8 207 aa10.23□□□□□ -0.77
RAB5B-210ENST00000553116 TOGARAM1Q9Y4F4 1720 aa10.23□□□□□ -0.77
RAB5B-210ENST00000553116 SURF6O75683 361 aaKnown RBP10.23□□□□□ -0.77
RAB5B-210ENST00000553116 GRM8O00222 908 aa10.22□□□□□ -0.77
RAB5B-210ENST00000553116 OTUD7AQ8TE49 926 aaPredicted RBP10.22□□□□□ -0.77
RAB5B-210ENST00000553116 PLEKHM2Q8IWE5 1019 aa10.22□□□□□ -0.77
RAB5B-210ENST00000553116 PIGBQ92521 554 aa10.22□□□□□ -0.77
RAB5B-210ENST00000553116 NGLY1Q96IV0 654 aa10.22□□□□□ -0.77
RAB5B-210ENST00000553116 ASAP1Q9ULH1 1129 aa10.22□□□□□ -0.77
RAB5B-210ENST00000553116 A1BGP04217 495 aa10.22□□□□□ -0.77
RAB5B-210ENST00000553116 METTL22Q9BUU2 404 aaPredicted RBP10.22□□□□□ -0.77
RAB5B-210ENST00000553116 CDCA7Q9BWT1 371 aaPredicted RBP10.22□□□□□ -0.77
RAB5B-210ENST00000553116 DISP2A7MBM2 1401 aa10.21□□□□□ -0.77
RAB5B-210ENST00000553116 SPATA31A1Q5TZJ5 1347 aa10.21□□□□□ -0.77
RAB5B-210ENST00000553116 UBR2Q8IWV8 1755 aa10.21□□□□□ -0.77
RAB5B-210ENST00000553116 ITGB4P16144 1822 aa10.21□□□□□ -0.77
RAB5B-210ENST00000553116 AFDNP55196 1824 aaKnown RBP10.21□□□□□ -0.78
RAB5B-210ENST00000553116 KCPQ6ZWJ8 1503 aa10.21□□□□□ -0.78
RAB5B-210ENST00000553116 ATP5J2-PTCD1G3V325 749 aa10.21□□□□□ -0.78
RAB5B-210ENST00000553116 TNS2Q63HR2 1409 aa10.21□□□□□ -0.78
RAB5B-210ENST00000553116 WNK3Q9BYP7 1800 aa10.21□□□□□ -0.78
RAB5B-210ENST00000553116 ERBB4Q15303 1308 aa10.21□□□□□ -0.78
RAB5B-210ENST00000553116 NEURL1BA8MQ27 555 aa10.2□□□□□ -0.78
RAB5B-210ENST00000553116 TTC22Q5TAA0 569 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms