RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 GPR101Q96P66 508 aaPredicted RBP7.35□□□□□ -1.23
CKAP4-203ENST00000553039 MCOLN1Q9GZU1 580 aa7.35□□□□□ -1.23
CKAP4-203ENST00000553039 ABT1Q9ULW3 272 aaKnown RBP7.35□□□□□ -1.23
CKAP4-203ENST00000553039 PDE4DIPQ5VU43 2346 aa7.34□□□□□ -1.23
CKAP4-203ENST00000553039 ITGBL1O95965 494 aaPredicted RBP7.34□□□□□ -1.23
CKAP4-203ENST00000553039 MAP2K2P36507 400 aa7.34□□□□□ -1.23
CKAP4-203ENST00000553039 TMOD3Q9NYL9 352 aa7.34□□□□□ -1.23
CKAP4-203ENST00000553039 H0YIN7 160 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 HOXC9P31274 260 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 RASSF7Q02833 373 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 ITPK1Q13572 414 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 DGKZQ13574 1117 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 NEUROD2Q15784 382 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 NBPF6Q5VWK0 638 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 PNMA8AQ86V59 439 aaPredicted RBP7.33□□□□□ -1.24
CKAP4-203ENST00000553039 CNTROBQ8N137 903 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 TMC1Q8TDI8 760 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 NBPF4Q96M43 638 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 TERF2IPQ9NYB0 399 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 PDZRN3Q9UPQ7 1066 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 SPG7Q9UQ90 795 aa7.33□□□□□ -1.24
CKAP4-203ENST00000553039 DDNO94850 711 aaPredicted RBP7.32□□□□□ -1.24
CKAP4-203ENST00000553039 RASEFQ8IZ41 740 aa7.32□□□□□ -1.24
CKAP4-203ENST00000553039 NBPF15Q8N660 670 aa7.32□□□□□ -1.24
CKAP4-203ENST00000553039 COG3Q96JB2 828 aa7.32□□□□□ -1.24
CKAP4-203ENST00000553039 ASAP1Q9ULH1 1129 aa7.32□□□□□ -1.24
CKAP4-203ENST00000553039 MAP3K19Q56UN5 1328 aa7.31□□□□□ -1.24
CKAP4-203ENST00000553039 CYP27B1O15528 508 aa7.31□□□□□ -1.24
CKAP4-203ENST00000553039 LY75O60449 1722 aa7.31□□□□□ -1.24
CKAP4-203ENST00000553039 ZPR1O75312 459 aa7.31□□□□□ -1.24
CKAP4-203ENST00000553039 TM4SF1P30408 202 aa7.31□□□□□ -1.24
CKAP4-203ENST00000553039 EAPPQ56P03 285 aaPredicted RBP7.31□□□□□ -1.24
CKAP4-203ENST00000553039 SPDYE1Q8NFV5 336 aaPredicted RBP7.31□□□□□ -1.24
CKAP4-203ENST00000553039 CAPNS2Q96L46 248 aa7.31□□□□□ -1.24
CKAP4-203ENST00000553039 RBM42Q9BTD8 480 aaKnown RBP7.31□□□□□ -1.24
CKAP4-203ENST00000553039 TAF1DQ9H5J8 278 aaPredicted RBP7.31□□□□□ -1.24
CKAP4-203ENST00000553039 WNK3Q9BYP7 1800 aa7.31□□□□□ -1.24
CKAP4-203ENST00000553039 CD163L1Q9NR16 1453 aa7.3□□□□□ -1.24
CKAP4-203ENST00000553039 KDM6AO15550 1401 aaPredicted RBP7.3□□□□□ -1.24
CKAP4-203ENST00000553039 TESPA1A2RU30 521 aaPredicted RBP7.3□□□□□ -1.24
CKAP4-203ENST00000553039 POTEIP0CG38 1075 aa7.3□□□□□ -1.24
CKAP4-203ENST00000553039 POTEJP0CG39 1038 aa7.3□□□□□ -1.24
CKAP4-203ENST00000553039 ATG3Q9NT62 314 aa7.3□□□□□ -1.24
CKAP4-203ENST00000553039 HACL1Q9UJ83 578 aa7.3□□□□□ -1.24
CKAP4-203ENST00000553039 NFAT5O94916 1531 aa7.3□□□□□ -1.24
CKAP4-203ENST00000553039 TUBGCP6Q96RT7 1819 aa7.29□□□□□ -1.24
CKAP4-203ENST00000553039 TNRC6CQ9HCJ0 1690 aaKnown RBP7.29□□□□□ -1.24
CKAP4-203ENST00000553039 RGPD5Q99666 1765 aa7.29□□□□□ -1.24
CKAP4-203ENST00000553039 GRM1Q13255 1194 aa7.29□□□□□ -1.24
CKAP4-203ENST00000553039 SOGA3Q5TF21 947 aa7.29□□□□□ -1.24
CKAP4-203ENST00000553039 C2CD5Q86YS7 1000 aa7.29□□□□□ -1.24
CKAP4-203ENST00000553039 USHBP1Q8N6Y0 703 aa7.29□□□□□ -1.24
CKAP4-203ENST00000553039 L3MBTL3Q96JM7 780 aaPredicted RBP7.29□□□□□ -1.24
CKAP4-203ENST00000553039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.29□□□□□ -1.24
CKAP4-203ENST00000553039 PIK3C2AO00443 1686 aa7.28□□□□□ -1.24
CKAP4-203ENST00000553039 NFKBIEO00221 500 aa7.28□□□□□ -1.24
CKAP4-203ENST00000553039 POLRMTO00411 1230 aaKnown RBP7.28□□□□□ -1.24
CKAP4-203ENST00000553039 ZMYND10O75800 440 aa7.28□□□□□ -1.24
CKAP4-203ENST00000553039 IFNL2Q8IZJ0 200 aa7.28□□□□□ -1.24
CKAP4-203ENST00000553039 ZNF622Q969S3 477 aaKnown RBP eCLIP7.28□□□□□ -1.24
CKAP4-203ENST00000553039 TAOK3Q9H2K8 898 aa7.28□□□□□ -1.24
CKAP4-203ENST00000553039 SLC24A3Q9HC58 644 aa7.28□□□□□ -1.24
CKAP4-203ENST00000553039 DDX21Q9NR30 783 aaKnown RBP eCLIP7.28□□□□□ -1.24
CKAP4-203ENST00000553039 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.24
CKAP4-203ENST00000553039 C4BP0C0L5 1744 aa7.27□□□□□ -1.25
CKAP4-203ENST00000553039 ERVV-2B6SEH9 535 aa7.27□□□□□ -1.25
CKAP4-203ENST00000553039 DLL1O00548 723 aa7.27□□□□□ -1.25
CKAP4-203ENST00000553039 C21orf2O43822 256 aa7.27□□□□□ -1.25
CKAP4-203ENST00000553039 PYGBP11216 843 aa7.27□□□□□ -1.25
CKAP4-203ENST00000553039 EPHX2P34913 555 aa7.27□□□□□ -1.25
CKAP4-203ENST00000553039 PDE6BP35913 854 aa7.27□□□□□ -1.25
CKAP4-203ENST00000553039 DDR1Q08345 913 aa7.27□□□□□ -1.25
CKAP4-203ENST00000553039 HABP4Q5JVS0 413 aaKnown RBP7.27□□□□□ -1.25
CKAP4-203ENST00000553039 MAP1SQ66K74 1059 aaPredicted RBP7.27□□□□□ -1.25
CKAP4-203ENST00000553039 SLC12A5Q9H2X9 1139 aa7.27□□□□□ -1.25
CKAP4-203ENST00000553039 TSKSQ9UJT2 592 aa7.27□□□□□ -1.25
CKAP4-203ENST00000553039 SMG6Q86US8 1419 aaKnown RBP7.27□□□□□ -1.25
CKAP4-203ENST00000553039 SBNO2Q9Y2G9 1366 aa7.26□□□□□ -1.25
CKAP4-203ENST00000553039 SERPINB2P05120 415 aa7.26□□□□□ -1.25
CKAP4-203ENST00000553039 HSP90AB1P08238 724 aaKnown RBP7.26□□□□□ -1.25
CKAP4-203ENST00000553039 SOX10P56693 466 aa7.26□□□□□ -1.25
CKAP4-203ENST00000553039 E2F4Q16254 413 aa7.26□□□□□ -1.25
CKAP4-203ENST00000553039 CYP4F22Q6NT55 531 aa7.26□□□□□ -1.25
CKAP4-203ENST00000553039 CNKSR1Q969H4 720 aa7.26□□□□□ -1.25
CKAP4-203ENST00000553039 PUS7Q96PZ0 661 aaKnown RBP7.26□□□□□ -1.25
CKAP4-203ENST00000553039 SRP68Q9UHB9 627 aaKnown RBP7.26□□□□□ -1.25
CKAP4-203ENST00000553039 KIAA1210Q9ULL0 1709 aa7.26□□□□□ -1.25
CKAP4-203ENST00000553039 USP42Q9H9J4 1324 aaKnown RBP7.26□□□□□ -1.25
CKAP4-203ENST00000553039 LTBP3Q9NS15 1303 aa7.26□□□□□ -1.25
CKAP4-203ENST00000553039 N4BP2Q86UW6 1770 aaPredicted RBP7.25□□□□□ -1.25
CKAP4-203ENST00000553039 C5P01031 1676 aa7.25□□□□□ -1.25
CKAP4-203ENST00000553039 ZNF467Q7Z7K2 595 aaPredicted RBP7.25□□□□□ -1.25
CKAP4-203ENST00000553039 HHIPL1Q96JK4 782 aa7.25□□□□□ -1.25
CKAP4-203ENST00000553039 MEGF6O75095 1541 aa7.24□□□□□ -1.25
CKAP4-203ENST00000553039 FBLN1P23142 703 aa7.24□□□□□ -1.25
CKAP4-203ENST00000553039 CRKLP46109 303 aaKnown RBP7.24□□□□□ -1.25
CKAP4-203ENST00000553039 CABP4P57796 275 aa7.24□□□□□ -1.25
CKAP4-203ENST00000553039 HSP90AB2PQ58FF8 381 aa7.24□□□□□ -1.25
CKAP4-203ENST00000553039 AKAP4Q5JQC9 854 aa7.24□□□□□ -1.25
CKAP4-203ENST00000553039 USPL1Q5W0Q7 1092 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms