RNA–Protein interactions for RNA: ENST00000552628.1

LINC02396-204, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 4

Gene LINC02396, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-204ENST00000552628 CC2D1BQ5T0F9 858 aaKnown RBP20.52■□□□□ 0.88
LINC02396-204ENST00000552628 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
LINC02396-204ENST00000552628 LMNB1P20700 586 aa20.51■□□□□ 0.87
LINC02396-204ENST00000552628 ARFGEF1Q9Y6D6 1849 aa20.5■□□□□ 0.87
LINC02396-204ENST00000552628 MYH14Q7Z406 1995 aaKnown RBP20.5■□□□□ 0.87
LINC02396-204ENST00000552628 TTLL6Q8N841 843 aa20.5■□□□□ 0.87
LINC02396-204ENST00000552628 ZNF831Q5JPB2 1677 aa20.5■□□□□ 0.87
LINC02396-204ENST00000552628 GLTPD2A6NH11 291 aa20.49■□□□□ 0.87
LINC02396-204ENST00000552628 H0YIN7 160 aa20.49■□□□□ 0.87
LINC02396-204ENST00000552628 SERPINB2P05120 415 aa20.49■□□□□ 0.87
LINC02396-204ENST00000552628 NFIXQ14938 502 aa20.49■□□□□ 0.87
LINC02396-204ENST00000552628 BICDL1Q6ZP65 573 aa20.49■□□□□ 0.87
LINC02396-204ENST00000552628 C2CD5Q86YS7 1000 aa20.49■□□□□ 0.87
LINC02396-204ENST00000552628 BRCA1P38398 1863 aaKnown RBP20.49■□□□□ 0.87
LINC02396-204ENST00000552628 SLC39A6Q13433 755 aa20.48■□□□□ 0.87
LINC02396-204ENST00000552628 AKAP4Q5JQC9 854 aa20.48■□□□□ 0.87
LINC02396-204ENST00000552628 DPY19L2Q6NUT2 758 aa20.48■□□□□ 0.87
LINC02396-204ENST00000552628 ZNF219Q9P2Y4 722 aaPredicted RBP20.48■□□□□ 0.87
LINC02396-204ENST00000552628 NARFQ9UHQ1 456 aa20.48■□□□□ 0.87
LINC02396-204ENST00000552628 COL3A1P02461 1466 aaPredicted RBP20.48■□□□□ 0.87
LINC02396-204ENST00000552628 IL13P35225 146 aa20.47■□□□□ 0.87
LINC02396-204ENST00000552628 SLC52A2Q9HAB3 445 aa20.47■□□□□ 0.87
LINC02396-204ENST00000552628 LGR6Q9HBX8 967 aa20.47■□□□□ 0.87
LINC02396-204ENST00000552628 CANXP27824 592 aaKnown RBP20.46■□□□□ 0.87
LINC02396-204ENST00000552628 ZNF622Q969S3 477 aaKnown RBP eCLIP20.46■□□□□ 0.87
LINC02396-204ENST00000552628 SOS1Q07889 1333 aaPredicted RBP20.46■□□□□ 0.87
LINC02396-204ENST00000552628 HSPA1AP0DMV8 641 aaKnown RBP20.45■□□□□ 0.86
LINC02396-204ENST00000552628 HSPA1BP0DMV9 641 aaKnown RBP20.45■□□□□ 0.86
LINC02396-204ENST00000552628 CYP19A1P11511 503 aaPredicted RBP20.45■□□□□ 0.86
LINC02396-204ENST00000552628 ZC3H4Q9UPT8 1303 aaKnown RBP20.45■□□□□ 0.86
LINC02396-204ENST00000552628 PRELPP51888 382 aa20.44■□□□□ 0.86
LINC02396-204ENST00000552628 ZBTB1Q9Y2K1 713 aa20.44■□□□□ 0.86
LINC02396-204ENST00000552628 NPHP1O15259 732 aa20.43■□□□□ 0.86
LINC02396-204ENST00000552628 HMOX1P09601 288 aa20.43■□□□□ 0.86
LINC02396-204ENST00000552628 ZNF330Q9Y3S2 320 aaPredicted RBP20.43■□□□□ 0.86
LINC02396-204ENST00000552628 TNRC6CQ9HCJ0 1690 aaKnown RBP20.42■□□□□ 0.86
LINC02396-204ENST00000552628 RNMTO43148 476 aaKnown RBP20.42■□□□□ 0.86
LINC02396-204ENST00000552628 COL15A1P39059 1388 aa20.42■□□□□ 0.86
LINC02396-204ENST00000552628 SBF1O95248 1867 aa20.41■□□□□ 0.86
LINC02396-204ENST00000552628 NPM2Q86SE8 214 aaKnown RBP20.41■□□□□ 0.86
LINC02396-204ENST00000552628 TTC5Q8N0Z6 440 aa20.41■□□□□ 0.86
LINC02396-204ENST00000552628 DIAPH1O60610 1272 aaKnown RBP20.4■□□□□ 0.86
LINC02396-204ENST00000552628 ERFEQ4G0M1 354 aa20.4■□□□□ 0.86
LINC02396-204ENST00000552628 TJP1Q07157 1748 aa20.39■□□□□ 0.86
LINC02396-204ENST00000552628 A0A087WZG4 1122 aa20.39■□□□□ 0.85
LINC02396-204ENST00000552628 C21orf2O43822 256 aa20.39■□□□□ 0.85
LINC02396-204ENST00000552628 STARD3NLO95772 234 aa20.39■□□□□ 0.85
LINC02396-204ENST00000552628 CCDC24Q8N4L8 307 aa20.39■□□□□ 0.85
LINC02396-204ENST00000552628 BCL2L12Q9HB09 334 aa20.39■□□□□ 0.85
LINC02396-204ENST00000552628 PDE6BP35913 854 aa20.38■□□□□ 0.85
LINC02396-204ENST00000552628 NFKBIEO00221 500 aa20.37■□□□□ 0.85
LINC02396-204ENST00000552628 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
LINC02396-204ENST00000552628 MKRN1Q9UHC7 482 aaKnown RBP20.37■□□□□ 0.85
LINC02396-204ENST00000552628 MTHFSDQ2M296 383 aaKnown RBP20.36■□□□□ 0.85
LINC02396-204ENST00000552628 VSIG10Q8N0Z9 540 aa20.36■□□□□ 0.85
LINC02396-204ENST00000552628 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
LINC02396-204ENST00000552628 TBC1D9BQ66K14 1250 aa20.35■□□□□ 0.85
LINC02396-204ENST00000552628 TBC1D2BQ9UPU7 963 aa20.35■□□□□ 0.85
LINC02396-204ENST00000552628 POTECB2RU33 542 aa20.34■□□□□ 0.85
LINC02396-204ENST00000552628 CHADLQ6NUI6 762 aa20.34■□□□□ 0.85
LINC02396-204ENST00000552628 BRIP1Q9BX63 1249 aa20.34■□□□□ 0.85
LINC02396-204ENST00000552628 PDZRN3Q9UPQ7 1066 aa20.34■□□□□ 0.85
LINC02396-204ENST00000552628 SCN11AQ9UI33 1791 aa20.34■□□□□ 0.85
LINC02396-204ENST00000552628 AFDNP55196 1824 aaKnown RBP20.33■□□□□ 0.85
LINC02396-204ENST00000552628 CARMIL3Q8ND23 1372 aa20.33■□□□□ 0.84
LINC02396-204ENST00000552628 TEFQ10587 303 aa20.32■□□□□ 0.84
LINC02396-204ENST00000552628 CNGB1Q14028 1251 aaPredicted RBP20.32■□□□□ 0.84
LINC02396-204ENST00000552628 SETDB2Q96T68 719 aa20.32■□□□□ 0.84
LINC02396-204ENST00000552628 TAOK3Q9H2K8 898 aa20.32■□□□□ 0.84
LINC02396-204ENST00000552628 ADAMTS7Q9UKP4 1686 aa20.32■□□□□ 0.84
LINC02396-204ENST00000552628 CCDC88AQ3V6T2 1871 aa20.31■□□□□ 0.84
LINC02396-204ENST00000552628 DDNO94850 711 aaPredicted RBP20.31■□□□□ 0.84
LINC02396-204ENST00000552628 EIF5P55010 431 aaKnown RBP20.31■□□□□ 0.84
LINC02396-204ENST00000552628 CNKSR1Q969H4 720 aa20.31■□□□□ 0.84
LINC02396-204ENST00000552628 TEX13AQ9BXU3 409 aaPredicted RBP20.31■□□□□ 0.84
LINC02396-204ENST00000552628 CREBZFQ9NS37 354 aa20.31■□□□□ 0.84
LINC02396-204ENST00000552628 ST5P78524 1137 aa20.3■□□□□ 0.84
LINC02396-204ENST00000552628 RALBP1Q15311 655 aa20.3■□□□□ 0.84
LINC02396-204ENST00000552628 PRR5LQ6MZQ0 368 aa20.3■□□□□ 0.84
LINC02396-204ENST00000552628 DDX10Q13206 875 aaKnown RBP20.29■□□□□ 0.84
LINC02396-204ENST00000552628 CNBD1Q8NA66 436 aa20.29■□□□□ 0.84
LINC02396-204ENST00000552628 CLEC11AQ9Y240 323 aa20.29■□□□□ 0.84
LINC02396-204ENST00000552628 ZNF496Q96IT1 587 aaPredicted RBP20.28■□□□□ 0.84
LINC02396-204ENST00000552628 NUDCQ9Y266 331 aa20.28■□□□□ 0.84
LINC02396-204ENST00000552628 MRC1P22897 1456 aa20.27■□□□□ 0.84
LINC02396-204ENST00000552628 U2SURPO15042 1029 aaKnown RBP20.27■□□□□ 0.84
LINC02396-204ENST00000552628 POTEIP0CG38 1075 aa20.27■□□□□ 0.84
LINC02396-204ENST00000552628 POTEJP0CG39 1038 aa20.27■□□□□ 0.84
LINC02396-204ENST00000552628 AIDAQ96BJ3 306 aa20.27■□□□□ 0.84
LINC02396-204ENST00000552628 TIAM2Q8IVF5 1701 aa20.27■□□□□ 0.83
LINC02396-204ENST00000552628 VIRMAQ69YN4 1812 aaKnown RBP20.26■□□□□ 0.83
LINC02396-204ENST00000552628 IQCA1LA6NCM1 817 aa20.26■□□□□ 0.83
LINC02396-204ENST00000552628 IL6STP40189 918 aaPredicted RBP20.26■□□□□ 0.83
LINC02396-204ENST00000552628 EAPPQ56P03 285 aaPredicted RBP20.26■□□□□ 0.83
LINC02396-204ENST00000552628 SOGA3Q5TF21 947 aa20.26■□□□□ 0.83
LINC02396-204ENST00000552628 ZNF790Q6PG37 636 aa20.26■□□□□ 0.83
LINC02396-204ENST00000552628 NRXN2Q9P2S2 1712 aa20.25■□□□□ 0.83
LINC02396-204ENST00000552628 GNAT3A8MTJ3 354 aa20.25■□□□□ 0.83
LINC02396-204ENST00000552628 A1BGP04217 495 aa20.25■□□□□ 0.83
LINC02396-204ENST00000552628 PRPF40BQ6NWY9 871 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms