RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 CCDC129Q6ZRS4 1044 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 NSD2O96028 1365 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 NINLQ9Y2I6 1382 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 BTG4Q9NY30 223 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 FLT4P35916 1363 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 ADGBQ8N7X0 1667 aa12.9□□□□□ -0.34
TGFBR1-209ENST00000552516 BICC1Q9H694 974 aaKnown RBP12.89□□□□□ -0.35
TGFBR1-209ENST00000552516 HDAC1Q13547 482 aaPredicted RBP12.89□□□□□ -0.35
TGFBR1-209ENST00000552516 AAMPQ13685 434 aa12.89□□□□□ -0.35
TGFBR1-209ENST00000552516 BMP2KLQ5H9B9 411 aa12.89□□□□□ -0.35
TGFBR1-209ENST00000552516 USP16Q9Y5T5 823 aa12.89□□□□□ -0.35
TGFBR1-209ENST00000552516 AKAP17AQ02040 695 aaKnown RBP12.89□□□□□ -0.35
TGFBR1-209ENST00000552516 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
TGFBR1-209ENST00000552516 AMOTQ4VCS5 1084 aa12.89□□□□□ -0.35
TGFBR1-209ENST00000552516 TMEM2Q9UHN6 1383 aa12.88□□□□□ -0.35
TGFBR1-209ENST00000552516 ISM2Q6H9L7 571 aa12.88□□□□□ -0.35
TGFBR1-209ENST00000552516 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
TGFBR1-209ENST00000552516 FAM173BQ6P4H8 233 aa12.88□□□□□ -0.35
TGFBR1-209ENST00000552516 KDM5DQ9BY66 1539 aa12.88□□□□□ -0.35
TGFBR1-209ENST00000552516 SYNE3Q6ZMZ3 975 aa12.88□□□□□ -0.35
TGFBR1-209ENST00000552516 ZCRB1Q8TBF4 217 aaKnown RBP12.88□□□□□ -0.35
TGFBR1-209ENST00000552516 RAI14Q9P0K7 980 aa12.88□□□□□ -0.35
TGFBR1-209ENST00000552516 LDHAL6AQ6ZMR3 332 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 C19orf44Q9H6X5 657 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 RNF123Q5XPI4 1314 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 EXOC5O00471 708 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 MARCH6O60337 910 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 TMX4Q9H1E5 349 aaPredicted RBP12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 LRP2BPQ9P2M1 347 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 CHL1O00533 1208 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 RXRAP19793 462 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 CKAP2LQ8IYA6 745 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 FAM13BQ9NYF5 915 aa12.87□□□□□ -0.35
TGFBR1-209ENST00000552516 RNMTO43148 476 aaKnown RBP12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 SMC5Q8IY18 1101 aa12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 PTPRCP08575 1304 aa12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 GRM8O00222 908 aa12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 GLRX3O76003 335 aaKnown RBP12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 IP6K1Q92551 441 aa12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 EIF2AK4Q9P2K8 1649 aaKnown RBP12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 ZMYM4Q5VZL5 1548 aa12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 GOLGA6L19H0YKK7 550 aa12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 CCAR2Q8N163 923 aaKnown RBP12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 ZBTB9Q96C00 473 aa12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 PREX2Q70Z35 1606 aa12.86□□□□□ -0.35
TGFBR1-209ENST00000552516 ECHDC1Q9NTX5 307 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 IL16Q14005 1332 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 STARD3NLO95772 234 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 SNRPA1P09661 255 aaKnown RBP12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 PKP1Q13835 747 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 ARHGEF5Q12774 1597 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 BLMP54132 1417 aaPredicted RBP12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 RBM10P98175 930 aaKnown RBP12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 DCTPP1Q9H773 170 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 R3HCC1Q9Y3T6 440 aaKnown RBP12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 TFCP2Q12800 502 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 IFIT5Q13325 482 aaKnown RBP12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 AKAP4Q5JQC9 854 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 ERC1Q8IUD2 1116 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 TMX3Q96JJ7 454 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 SBNO2Q9Y2G9 1366 aa12.85□□□□□ -0.35
TGFBR1-209ENST00000552516 CD2BP2O95400 341 aaKnown RBP12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 CDK11BP21127 795 aaKnown RBP12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 ME1P48163 572 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 CDC42BPBQ9Y5S2 1711 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 TRIM29Q14134 588 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 FAM227BQ96M60 508 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 HCLS1P14317 486 aaPredicted RBP12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 GSPT1P15170 499 aaKnown RBP12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 TDO2P48775 406 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 SKOR2Q2VWA4 1001 aaPredicted RBP12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 ZNF521Q96K83 1311 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 TTLL5Q6EMB2 1281 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 ATP8B2P98198 1209 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 UNC5CLQ8IV45 518 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 ATP6V1DQ9Y5K8 247 aa12.84□□□□□ -0.35
TGFBR1-209ENST00000552516 TTC21AQ8NDW8 1320 aa12.83□□□□□ -0.35
TGFBR1-209ENST00000552516 PIK3R4Q99570 1358 aa12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 ZNF790Q6PG37 636 aa12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 MAP3K5Q99683 1374 aa12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 AXIN2Q9Y2T1 843 aa12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 CLTCL1P53675 1640 aa12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 ZFYVE16Q7Z3T8 1539 aa12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 HSP90AA4PQ58FG1 418 aa12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 KSR2Q6VAB6 950 aa12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 SIRT2Q8IXJ6 389 aa12.83□□□□□ -0.36
TGFBR1-209ENST00000552516 PSMA5P28066 241 aa12.82□□□□□ -0.36
TGFBR1-209ENST00000552516 SLFNL1Q499Z3 407 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms