RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 USPL1Q5W0Q7 1092 aa17.69■□□□□ 0.42
CACNB3-221ENST00000552022 DPY19L2Q6NUT2 758 aa17.69■□□□□ 0.42
CACNB3-221ENST00000552022 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
CACNB3-221ENST00000552022 POTEIP0CG38 1075 aa17.68■□□□□ 0.42
CACNB3-221ENST00000552022 POTEJP0CG39 1038 aa17.68■□□□□ 0.42
CACNB3-221ENST00000552022 CHADLQ6NUI6 762 aa17.68■□□□□ 0.42
CACNB3-221ENST00000552022 VIRMAQ69YN4 1812 aaKnown RBP17.68■□□□□ 0.42
CACNB3-221ENST00000552022 ZPR1O75312 459 aa17.67■□□□□ 0.42
CACNB3-221ENST00000552022 NFIXQ14938 502 aa17.67■□□□□ 0.42
CACNB3-221ENST00000552022 NFATC2IPQ8NCF5 419 aa17.67■□□□□ 0.42
CACNB3-221ENST00000552022 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
CACNB3-221ENST00000552022 CNTNAP1P78357 1384 aa17.66■□□□□ 0.42
CACNB3-221ENST00000552022 CTCFP49711 727 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-221ENST00000552022 PLEKHO1Q53GL0 409 aaPredicted RBP17.66■□□□□ 0.42
CACNB3-221ENST00000552022 ZNF530Q6P9A1 599 aaPredicted RBP17.65■□□□□ 0.42
CACNB3-221ENST00000552022 C2CD5Q86YS7 1000 aa17.65■□□□□ 0.42
CACNB3-221ENST00000552022 SERPINB2P05120 415 aa17.64■□□□□ 0.41
CACNB3-221ENST00000552022 MTHFSP49914 203 aa17.64■□□□□ 0.41
CACNB3-221ENST00000552022 FAM161AQ3B820 660 aa17.64■□□□□ 0.41
CACNB3-221ENST00000552022 SOS1Q07889 1333 aaPredicted RBP17.64■□□□□ 0.41
CACNB3-221ENST00000552022 VEGFBP49765 207 aa17.63■□□□□ 0.41
CACNB3-221ENST00000552022 LBX1P52954 281 aa17.63■□□□□ 0.41
CACNB3-221ENST00000552022 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
CACNB3-221ENST00000552022 BCL2L12Q9HB09 334 aa17.63■□□□□ 0.41
CACNB3-221ENST00000552022 NARFQ9UHQ1 456 aa17.63■□□□□ 0.41
CACNB3-221ENST00000552022 PASKQ96RG2 1323 aa17.63■□□□□ 0.41
CACNB3-221ENST00000552022 ANKRD31Q8N7Z5 1873 aa17.63■□□□□ 0.41
CACNB3-221ENST00000552022 SCN11AQ9UI33 1791 aa17.62■□□□□ 0.41
CACNB3-221ENST00000552022 H0YIN7 160 aa17.62■□□□□ 0.41
CACNB3-221ENST00000552022 DNAJC10Q8IXB1 793 aa17.62■□□□□ 0.41
CACNB3-221ENST00000552022 AIDAQ96BJ3 306 aa17.62■□□□□ 0.41
CACNB3-221ENST00000552022 WBP1LQ9NX94 342 aa17.62■□□□□ 0.41
CACNB3-221ENST00000552022 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
CACNB3-221ENST00000552022 DDNO94850 711 aaPredicted RBP17.61■□□□□ 0.41
CACNB3-221ENST00000552022 AMOTQ4VCS5 1084 aa17.61■□□□□ 0.41
CACNB3-221ENST00000552022 CDCA8Q53HL2 280 aa17.61■□□□□ 0.41
CACNB3-221ENST00000552022 ABHD8Q96I13 439 aa17.61■□□□□ 0.41
CACNB3-221ENST00000552022 PCDH10Q9P2E7 1040 aa17.6■□□□□ 0.41
CACNB3-221ENST00000552022 C21orf2O43822 256 aa17.59■□□□□ 0.41
CACNB3-221ENST00000552022 CYP19A1P11511 503 aaPredicted RBP17.59■□□□□ 0.41
CACNB3-221ENST00000552022 TNNT2P45379 298 aaPredicted RBP17.59■□□□□ 0.41
CACNB3-221ENST00000552022 ZNF219Q9P2Y4 722 aaPredicted RBP17.59■□□□□ 0.41
CACNB3-221ENST00000552022 SCN4AP35499 1836 aa17.58■□□□□ 0.41
CACNB3-221ENST00000552022 COL15A1P39059 1388 aa17.58■□□□□ 0.4
CACNB3-221ENST00000552022 ITGBL1O95965 494 aaPredicted RBP17.58■□□□□ 0.4
CACNB3-221ENST00000552022 SLX4Q8IY92 1834 aa17.57■□□□□ 0.4
CACNB3-221ENST00000552022 TMEM88BA6NKF7 163 aa17.57■□□□□ 0.4
CACNB3-221ENST00000552022 HSPA8P11142 646 aaKnown RBP17.57■□□□□ 0.4
CACNB3-221ENST00000552022 C1orf141Q5JVX7 400 aa17.57■□□□□ 0.4
CACNB3-221ENST00000552022 AEBP1Q8IUX7 1158 aa17.57■□□□□ 0.4
CACNB3-221ENST00000552022 ZNF622Q969S3 477 aaKnown RBP eCLIP17.57■□□□□ 0.4
CACNB3-221ENST00000552022 COL11A2P13942 1736 aaPredicted RBP17.57■□□□□ 0.4
CACNB3-221ENST00000552022 CACNA1SQ13698 1873 aa17.56■□□□□ 0.4
CACNB3-221ENST00000552022 LDHDQ86WU2 507 aa17.56■□□□□ 0.4
CACNB3-221ENST00000552022 ZBTB1Q9Y2K1 713 aa17.56■□□□□ 0.4
CACNB3-221ENST00000552022 LTBP3Q9NS15 1303 aa17.55■□□□□ 0.4
CACNB3-221ENST00000552022 BICDL1Q6ZP65 573 aa17.55■□□□□ 0.4
CACNB3-221ENST00000552022 TAOK3Q9H2K8 898 aa17.54■□□□□ 0.4
CACNB3-221ENST00000552022 TAF1DQ9H5J8 278 aaPredicted RBP17.54■□□□□ 0.4
CACNB3-221ENST00000552022 IQCA1LA6NCM1 817 aa17.53■□□□□ 0.4
CACNB3-221ENST00000552022 RGS19P49795 217 aa17.53■□□□□ 0.4
CACNB3-221ENST00000552022 MLLT1Q03111 559 aaPredicted RBP17.53■□□□□ 0.4
CACNB3-221ENST00000552022 SLC39A6Q13433 755 aa17.53■□□□□ 0.4
CACNB3-221ENST00000552022 CCDC24Q8N4L8 307 aa17.53■□□□□ 0.4
CACNB3-221ENST00000552022 L3MBTL3Q96JM7 780 aaPredicted RBP17.53■□□□□ 0.4
CACNB3-221ENST00000552022 BRIP1Q9BX63 1249 aa17.53■□□□□ 0.4
CACNB3-221ENST00000552022 RASSF10A6NK89 507 aa17.52■□□□□ 0.4
CACNB3-221ENST00000552022 PDE6BP35913 854 aa17.52■□□□□ 0.4
CACNB3-221ENST00000552022 SLC52A2Q9HAB3 445 aa17.52■□□□□ 0.4
CACNB3-221ENST00000552022 LGR6Q9HBX8 967 aa17.52■□□□□ 0.4
CACNB3-221ENST00000552022 PDZRN3Q9UPQ7 1066 aa17.52■□□□□ 0.4
CACNB3-221ENST00000552022 ADAMTSL1Q8N6G6 1762 aa17.52■□□□□ 0.4
CACNB3-221ENST00000552022 DEFB115Q30KQ5 88 aa17.51■□□□□ 0.39
CACNB3-221ENST00000552022 TBC1D9BQ66K14 1250 aa17.51■□□□□ 0.39
CACNB3-221ENST00000552022 ARFGEF2Q9Y6D5 1785 aa17.51■□□□□ 0.39
CACNB3-221ENST00000552022 CCDC85CA6NKD9 419 aa17.5■□□□□ 0.39
CACNB3-221ENST00000552022 CANXP27824 592 aaKnown RBP17.5■□□□□ 0.39
CACNB3-221ENST00000552022 PRR5LQ6MZQ0 368 aa17.5■□□□□ 0.39
CACNB3-221ENST00000552022 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
CACNB3-221ENST00000552022 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
CACNB3-221ENST00000552022 MAP2K1Q02750 393 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-221ENST00000552022 EAPPQ56P03 285 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-221ENST00000552022 SULT6B1Q6IMI4 303 aa17.49■□□□□ 0.39
CACNB3-221ENST00000552022 AKAP4Q5JQC9 854 aa17.48■□□□□ 0.39
CACNB3-221ENST00000552022 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
CACNB3-221ENST00000552022 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
CACNB3-221ENST00000552022 VSIG10Q8N0Z9 540 aa17.47■□□□□ 0.39
CACNB3-221ENST00000552022 CNKSR1Q969H4 720 aa17.47■□□□□ 0.39
CACNB3-221ENST00000552022 MRC1P22897 1456 aa17.47■□□□□ 0.39
CACNB3-221ENST00000552022 UBR2Q8IWV8 1755 aa17.47■□□□□ 0.39
CACNB3-221ENST00000552022 TNRC18O15417 2968 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-221ENST00000552022 RNMTO43148 476 aaKnown RBP17.46■□□□□ 0.39
CACNB3-221ENST00000552022 MAP1SQ66K74 1059 aaPredicted RBP17.46■□□□□ 0.39
CACNB3-221ENST00000552022 CNTROBQ8N137 903 aa17.46■□□□□ 0.39
CACNB3-221ENST00000552022 HACL1Q9UJ83 578 aa17.46■□□□□ 0.39
CACNB3-221ENST00000552022 ZNF541Q9H0D2 1346 aa17.46■□□□□ 0.38
CACNB3-221ENST00000552022 SCN7AQ01118 1682 aa17.45■□□□□ 0.38
CACNB3-221ENST00000552022 SRGNP10124 158 aa17.45■□□□□ 0.38
CACNB3-221ENST00000552022 SOGA3Q5TF21 947 aa17.45■□□□□ 0.38
CACNB3-221ENST00000552022 STYK1Q6J9G0 422 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms