RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 SPRYD3Q8NCJ5 442 aa10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 SPATA31A1Q5TZJ5 1347 aa10.04□□□□□ -0.8
RAB3IP-215ENST00000551641 EIF2S2P20042 333 aaKnown RBP10.03□□□□□ -0.8
RAB3IP-215ENST00000551641 BTBD11A6QL63 1104 aa10.03□□□□□ -0.8
RAB3IP-215ENST00000551641 RNMTO43148 476 aaKnown RBP10.03□□□□□ -0.8
RAB3IP-215ENST00000551641 PTCD1O75127 700 aaKnown RBP10.03□□□□□ -0.8
RAB3IP-215ENST00000551641 CABP4P57796 275 aa10.03□□□□□ -0.8
RAB3IP-215ENST00000551641 EP400Q96L91 3159 aa10.03□□□□□ -0.8
RAB3IP-215ENST00000551641 DDX11L8A8MPP1 907 aa10.02□□□□□ -0.8
RAB3IP-215ENST00000551641 CEP85Q6P2H3 762 aa10.02□□□□□ -0.8
RAB3IP-215ENST00000551641 SPATA31A5Q5VU36 1347 aa10.02□□□□□ -0.8
RAB3IP-215ENST00000551641 SPATA31A7Q8IWB4 1347 aa10.02□□□□□ -0.8
RAB3IP-215ENST00000551641 TTC22Q5TAA0 569 aa10.02□□□□□ -0.81
RAB3IP-215ENST00000551641 RTN4Q9NQC3 1192 aaKnown RBP10.02□□□□□ -0.81
RAB3IP-215ENST00000551641 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-215ENST00000551641 FNBP4Q8N3X1 1017 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-215ENST00000551641 GJD4Q96KN9 370 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-215ENST00000551641 BCL9LQ86UU0 1499 aa10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 LRRC37A3O60309 1634 aa10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 TRAK2O60296 914 aa10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 RAB3GAP1Q15042 981 aa10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 ILDR1Q86SU0 546 aaPredicted RBP10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 COL14A1Q05707 1796 aaKnown RBP10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 PCDH11XQ9BZA7 1347 aa10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 PCDH11YQ9BZA8 1340 aa10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 PRAMEF22A3QJZ6 481 aa10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 K7ELQ4 463 aaPredicted RBP10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 TAF7Q15545 349 aaPredicted RBP10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 VPS72Q15906 364 aa10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 FAM43AQ8N2R8 423 aa10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 TRPC5Q9UL62 973 aaPredicted RBP10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 ZNF330Q9Y3S2 320 aaPredicted RBP10.01□□□□□ -0.81
RAB3IP-215ENST00000551641 LMO7Q8WWI1 1683 aa10□□□□□ -0.81
RAB3IP-215ENST00000551641 CD2BP2O95400 341 aaKnown RBP10□□□□□ -0.81
RAB3IP-215ENST00000551641 PRIM1P49642 420 aaKnown RBP10□□□□□ -0.81
RAB3IP-215ENST00000551641 ARXQ96QS3 562 aa10□□□□□ -0.81
RAB3IP-215ENST00000551641 COL22A1Q8NFW1 1626 aaPredicted RBP10□□□□□ -0.81
RAB3IP-215ENST00000551641 PLCH1Q4KWH8 1693 aa10□□□□□ -0.81
RAB3IP-215ENST00000551641 KCNQ2O43526 872 aa10□□□□□ -0.81
RAB3IP-215ENST00000551641 ANXA1P04083 346 aa10□□□□□ -0.81
RAB3IP-215ENST00000551641 HSP90AB1P08238 724 aaKnown RBP10□□□□□ -0.81
RAB3IP-215ENST00000551641 KCNQ4P56696 695 aa10□□□□□ -0.81
RAB3IP-215ENST00000551641 SEPT12Q8IYM1 358 aa10□□□□□ -0.81
RAB3IP-215ENST00000551641 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
RAB3IP-215ENST00000551641 HTATSF1O43719 755 aaKnown RBP9.99□□□□□ -0.81
RAB3IP-215ENST00000551641 CLEC17AQ6ZS10 378 aa9.99□□□□□ -0.81
RAB3IP-215ENST00000551641 PTF1AQ7RTS3 328 aa9.99□□□□□ -0.81
RAB3IP-215ENST00000551641 MARCH10Q8NA82 808 aaPredicted RBP9.99□□□□□ -0.81
RAB3IP-215ENST00000551641 TNPO1Q92973 898 aaKnown RBP9.99□□□□□ -0.81
RAB3IP-215ENST00000551641 MEIS3Q99687 375 aa9.99□□□□□ -0.81
RAB3IP-215ENST00000551641 SLIT2O94813 1529 aa9.99□□□□□ -0.81
RAB3IP-215ENST00000551641 GOLGA6L3A6NEY3 463 aa9.99□□□□□ -0.81
RAB3IP-215ENST00000551641 TTC5Q8N0Z6 440 aa9.99□□□□□ -0.81
RAB3IP-215ENST00000551641 ISY1Q9ULR0 285 aaKnown RBP9.99□□□□□ -0.81
RAB3IP-215ENST00000551641 DCAF5Q96JK2 942 aa9.98□□□□□ -0.81
RAB3IP-215ENST00000551641 TMOD3Q9NYL9 352 aa9.98□□□□□ -0.81
RAB3IP-215ENST00000551641 SLC4A2P04920 1241 aa9.98□□□□□ -0.81
RAB3IP-215ENST00000551641 XRCC6P12956 609 aaKnown RBP eCLIP9.98□□□□□ -0.81
RAB3IP-215ENST00000551641 RABEP1Q15276 862 aa9.98□□□□□ -0.81
RAB3IP-215ENST00000551641 C16orf71Q8IYS4 520 aaPredicted RBP9.98□□□□□ -0.81
RAB3IP-215ENST00000551641 USP26Q9BXU7 913 aa9.98□□□□□ -0.81
RAB3IP-215ENST00000551641 OSBPL3Q9H4L5 887 aa9.98□□□□□ -0.81
RAB3IP-215ENST00000551641 SLC52A2Q9HAB3 445 aa9.98□□□□□ -0.81
RAB3IP-215ENST00000551641 OVOS2A0A0G2JMS6 1433 aa9.98□□□□□ -0.81
RAB3IP-215ENST00000551641 PTMSP20962 102 aa9.97□□□□□ -0.81
RAB3IP-215ENST00000551641 CCT4P50991 539 aaKnown RBP9.97□□□□□ -0.81
RAB3IP-215ENST00000551641 GBP4Q96PP9 640 aa9.97□□□□□ -0.81
RAB3IP-215ENST00000551641 ASAP1Q9ULH1 1129 aa9.97□□□□□ -0.81
RAB3IP-215ENST00000551641 SOS1Q07889 1333 aaPredicted RBP9.97□□□□□ -0.81
RAB3IP-215ENST00000551641 OTUD7AQ8TE49 926 aaPredicted RBP9.97□□□□□ -0.81
RAB3IP-215ENST00000551641 FAM208AQ9UK61 1670 aaKnown RBP9.97□□□□□ -0.81
RAB3IP-215ENST00000551641 KDM6AO15550 1401 aaPredicted RBP9.97□□□□□ -0.81
RAB3IP-215ENST00000551641 POTEAQ6S8J7 498 aa9.97□□□□□ -0.81
RAB3IP-215ENST00000551641 HMMRO75330 724 aa9.96□□□□□ -0.81
RAB3IP-215ENST00000551641 SDSP20132 328 aa9.96□□□□□ -0.81
RAB3IP-215ENST00000551641 PIGBQ92521 554 aa9.96□□□□□ -0.81
RAB3IP-215ENST00000551641 SKOR2Q2VWA4 1001 aaPredicted RBP9.96□□□□□ -0.82
RAB3IP-215ENST00000551641 G2E3Q7L622 706 aa9.96□□□□□ -0.82
RAB3IP-215ENST00000551641 ZNF496Q96IT1 587 aaPredicted RBP9.96□□□□□ -0.82
RAB3IP-215ENST00000551641 BABAM1Q9NWV8 329 aa9.96□□□□□ -0.82
RAB3IP-215ENST00000551641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.96□□□□□ -0.821e-6■■□□□ 13.1
RAB3IP-215ENST00000551641 N4BP2Q86UW6 1770 aaPredicted RBP9.95□□□□□ -0.82
RAB3IP-215ENST00000551641 MYL6BP14649 208 aa9.95□□□□□ -0.82
RAB3IP-215ENST00000551641 MRE11P49959 708 aa9.95□□□□□ -0.82
RAB3IP-215ENST00000551641 AIMP1Q12904 312 aaKnown RBP9.95□□□□□ -0.82
RAB3IP-215ENST00000551641 SALL3Q9BXA9 1300 aa9.95□□□□□ -0.82
RAB3IP-215ENST00000551641 RXRBP28702 533 aa9.95□□□□□ -0.82
RAB3IP-215ENST00000551641 ZNF772Q68DY9 489 aaPredicted RBP9.95□□□□□ -0.82
RAB3IP-215ENST00000551641 ZNF790Q6PG37 636 aa9.95□□□□□ -0.82
RAB3IP-215ENST00000551641 THRAP3Q9Y2W1 955 aaKnown RBP9.95□□□□□ -0.82
RAB3IP-215ENST00000551641 PXDNLA1KZ92 1463 aa9.94□□□□□ -0.82
RAB3IP-215ENST00000551641 HDGFL1Q5TGJ6 251 aa9.94□□□□□ -0.82
RAB3IP-215ENST00000551641 GZF1Q9H116 711 aaPredicted RBP9.94□□□□□ -0.82
RAB3IP-215ENST00000551641 RGS17Q9UGC6 210 aaPredicted RBP9.94□□□□□ -0.82
RAB3IP-215ENST00000551641 SMARCA5O60264 1052 aaPredicted RBP9.94□□□□□ -0.82
RAB3IP-215ENST00000551641 CASC1Q6TDU7 716 aa9.94□□□□□ -0.82
RAB3IP-215ENST00000551641 BARGINQ6ZT62 677 aa9.94□□□□□ -0.82
RAB3IP-215ENST00000551641 GNAI2P04899 355 aa9.93□□□□□ -0.82
RAB3IP-215ENST00000551641 HSP90AA1P07900 732 aaKnown RBP9.93□□□□□ -0.82
RAB3IP-215ENST00000551641 EIF4A1P60842 406 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms