RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 ADAMTS7Q9UKP4 1686 aa16.58■□□□□ 0.24
PTCH1-222ENST00000551425 TIAM2Q8IVF5 1701 aa16.58■□□□□ 0.24
PTCH1-222ENST00000551425 CTCFP49711 727 aaPredicted RBP16.57■□□□□ 0.24
PTCH1-222ENST00000551425 NFIXQ14938 502 aa16.56■□□□□ 0.24
PTCH1-222ENST00000551425 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
PTCH1-222ENST00000551425 ZNF530Q6P9A1 599 aaPredicted RBP16.56■□□□□ 0.24
PTCH1-222ENST00000551425 SOS1Q07889 1333 aaPredicted RBP16.55■□□□□ 0.24
PTCH1-222ENST00000551425 MTHFSP49914 203 aa16.55■□□□□ 0.24
PTCH1-222ENST00000551425 NFATC2IPQ8NCF5 419 aa16.55■□□□□ 0.24
PTCH1-222ENST00000551425 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
PTCH1-222ENST00000551425 PCDH10Q9P2E7 1040 aa16.55■□□□□ 0.24
PTCH1-222ENST00000551425 DLEC1Q9Y238 1755 aa16.55■□□□□ 0.24
PTCH1-222ENST00000551425 TJP1Q07157 1748 aa16.55■□□□□ 0.24
PTCH1-222ENST00000551425 NRXN2Q9P2S2 1712 aa16.55■□□□□ 0.24
PTCH1-222ENST00000551425 SERPINB2P05120 415 aa16.54■□□□□ 0.24
PTCH1-222ENST00000551425 C2CD5Q86YS7 1000 aa16.54■□□□□ 0.24
PTCH1-222ENST00000551425 NARFQ9UHQ1 456 aa16.54■□□□□ 0.24
PTCH1-222ENST00000551425 PASKQ96RG2 1323 aa16.53■□□□□ 0.24
PTCH1-222ENST00000551425 H0YIN7 160 aa16.53■□□□□ 0.24
PTCH1-222ENST00000551425 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
PTCH1-222ENST00000551425 POTEIP0CG38 1075 aa16.52■□□□□ 0.24
PTCH1-222ENST00000551425 POTEJP0CG39 1038 aa16.52■□□□□ 0.24
PTCH1-222ENST00000551425 FAM161AQ3B820 660 aa16.52■□□□□ 0.24
PTCH1-222ENST00000551425 WBP1LQ9NX94 342 aa16.52■□□□□ 0.24
PTCH1-222ENST00000551425 VEGFBP49765 207 aa16.51■□□□□ 0.23
PTCH1-222ENST00000551425 C1orf141Q5JVX7 400 aa16.51■□□□□ 0.23
PTCH1-222ENST00000551425 DNAJC10Q8IXB1 793 aa16.51■□□□□ 0.23
PTCH1-222ENST00000551425 BCL2L12Q9HB09 334 aa16.51■□□□□ 0.23
PTCH1-222ENST00000551425 AFDNP55196 1824 aaKnown RBP16.51■□□□□ 0.23
PTCH1-222ENST00000551425 LTBP3Q9NS15 1303 aa16.5■□□□□ 0.23
PTCH1-222ENST00000551425 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-222ENST00000551425 LBX1P52954 281 aa16.5■□□□□ 0.23
PTCH1-222ENST00000551425 ABHD8Q96I13 439 aa16.5■□□□□ 0.23
PTCH1-222ENST00000551425 COL15A1P39059 1388 aa16.5■□□□□ 0.23
PTCH1-222ENST00000551425 CARMIL3Q8ND23 1372 aa16.5■□□□□ 0.23
PTCH1-222ENST00000551425 CCDC88AQ3V6T2 1871 aa16.49■□□□□ 0.23
PTCH1-222ENST00000551425 LDHDQ86WU2 507 aa16.49■□□□□ 0.23
PTCH1-222ENST00000551425 PDZRN3Q9UPQ7 1066 aa16.49■□□□□ 0.23
PTCH1-222ENST00000551425 IQCA1LA6NCM1 817 aa16.48■□□□□ 0.23
PTCH1-222ENST00000551425 TMEM88BA6NKF7 163 aa16.48■□□□□ 0.23
PTCH1-222ENST00000551425 C21orf2O43822 256 aa16.48■□□□□ 0.23
PTCH1-222ENST00000551425 DDNO94850 711 aaPredicted RBP16.48■□□□□ 0.23
PTCH1-222ENST00000551425 ITGBL1O95965 494 aaPredicted RBP16.46■□□□□ 0.23
PTCH1-222ENST00000551425 HSPA8P11142 646 aaKnown RBP16.46■□□□□ 0.23
PTCH1-222ENST00000551425 ZNF622Q969S3 477 aaKnown RBP eCLIP16.46■□□□□ 0.23
PTCH1-222ENST00000551425 L3MBTL3Q96JM7 780 aaPredicted RBP16.46■□□□□ 0.23
PTCH1-222ENST00000551425 BRIP1Q9BX63 1249 aa16.46■□□□□ 0.23
PTCH1-222ENST00000551425 TAOK3Q9H2K8 898 aa16.46■□□□□ 0.23
PTCH1-222ENST00000551425 ZBTB1Q9Y2K1 713 aa16.46■□□□□ 0.23
PTCH1-222ENST00000551425 DICER1Q9UPY3 1922 aaKnown RBP16.46■□□□□ 0.23
PTCH1-222ENST00000551425 PDE6BP35913 854 aa16.45■□□□□ 0.22
PTCH1-222ENST00000551425 TNNT2P45379 298 aaPredicted RBP16.45■□□□□ 0.22
PTCH1-222ENST00000551425 RGS19P49795 217 aa16.45■□□□□ 0.22
PTCH1-222ENST00000551425 AEBP1Q8IUX7 1158 aa16.45■□□□□ 0.22
PTCH1-222ENST00000551425 TAF1DQ9H5J8 278 aaPredicted RBP16.45■□□□□ 0.22
PTCH1-222ENST00000551425 FER1L6Q2WGJ9 1857 aa16.44■□□□□ 0.22
PTCH1-222ENST00000551425 RASSF10A6NK89 507 aa16.44■□□□□ 0.22
PTCH1-222ENST00000551425 MLLT1Q03111 559 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-222ENST00000551425 SLC52A2Q9HAB3 445 aa16.44■□□□□ 0.22
PTCH1-222ENST00000551425 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-222ENST00000551425 VIRMAQ69YN4 1812 aaKnown RBP16.43■□□□□ 0.22
PTCH1-222ENST00000551425 MAP2K1Q02750 393 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-222ENST00000551425 SOGA3Q5TF21 947 aa16.42■□□□□ 0.22
PTCH1-222ENST00000551425 BICDL1Q6ZP65 573 aa16.42■□□□□ 0.22
PTCH1-222ENST00000551425 VSIG10Q8N0Z9 540 aa16.42■□□□□ 0.22
PTCH1-222ENST00000551425 DEFB115Q30KQ5 88 aa16.41■□□□□ 0.22
PTCH1-222ENST00000551425 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
PTCH1-222ENST00000551425 CNKSR1Q969H4 720 aa16.41■□□□□ 0.22
PTCH1-222ENST00000551425 MRC1P22897 1456 aa16.41■□□□□ 0.22
PTCH1-222ENST00000551425 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
PTCH1-222ENST00000551425 SCN4AP35499 1836 aa16.4■□□□□ 0.22
PTCH1-222ENST00000551425 ANKRD31Q8N7Z5 1873 aa16.4■□□□□ 0.22
PTCH1-222ENST00000551425 A0A087WZG4 1122 aa16.4■□□□□ 0.22
PTCH1-222ENST00000551425 EIF5P55010 431 aaKnown RBP16.4■□□□□ 0.22
PTCH1-222ENST00000551425 SLC39A6Q13433 755 aa16.4■□□□□ 0.22
PTCH1-222ENST00000551425 TBC1D9BQ66K14 1250 aa16.4■□□□□ 0.22
PTCH1-222ENST00000551425 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
PTCH1-222ENST00000551425 STYK1Q6J9G0 422 aa16.4■□□□□ 0.22
PTCH1-222ENST00000551425 PRR5LQ6MZQ0 368 aa16.4■□□□□ 0.22
PTCH1-222ENST00000551425 WDR33Q9C0J8 1336 aaKnown RBP16.4■□□□□ 0.22
PTCH1-222ENST00000551425 CANXP27824 592 aaKnown RBP16.39■□□□□ 0.21
PTCH1-222ENST00000551425 PRPF40BQ6NWY9 871 aaKnown RBP16.39■□□□□ 0.21
PTCH1-222ENST00000551425 LGR6Q9HBX8 967 aa16.39■□□□□ 0.21
PTCH1-222ENST00000551425 COL11A2P13942 1736 aaPredicted RBP16.39■□□□□ 0.21
PTCH1-222ENST00000551425 SRGNP10124 158 aa16.38■□□□□ 0.21
PTCH1-222ENST00000551425 EAPPQ56P03 285 aaPredicted RBP16.38■□□□□ 0.21
PTCH1-222ENST00000551425 HACL1Q9UJ83 578 aa16.38■□□□□ 0.21
PTCH1-222ENST00000551425 ADAMTSL1Q8N6G6 1762 aa16.37■□□□□ 0.21
PTCH1-222ENST00000551425 CCDC85CA6NKD9 419 aa16.37■□□□□ 0.21
PTCH1-222ENST00000551425 RNMTO43148 476 aaKnown RBP16.37■□□□□ 0.21
PTCH1-222ENST00000551425 PNMA8AQ86V59 439 aaPredicted RBP16.37■□□□□ 0.21
PTCH1-222ENST00000551425 STARD3NLO95772 234 aa16.36■□□□□ 0.21
PTCH1-222ENST00000551425 EPHX2P34913 555 aa16.36■□□□□ 0.21
PTCH1-222ENST00000551425 CNTROBQ8N137 903 aa16.36■□□□□ 0.21
PTCH1-222ENST00000551425 CCDC24Q8N4L8 307 aa16.36■□□□□ 0.21
PTCH1-222ENST00000551425 C7orf43Q8WVR3 580 aa16.36■□□□□ 0.21
PTCH1-222ENST00000551425 MASTLQ96GX5 879 aa16.36■□□□□ 0.21
PTCH1-222ENST00000551425 CLEC11AQ9Y240 323 aa16.36■□□□□ 0.21
PTCH1-222ENST00000551425 CNBD1Q8NA66 436 aa16.35■□□□□ 0.21
PTCH1-222ENST00000551425 ZNF541Q9H0D2 1346 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms