RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 KIF18AQ8NI77 898 aa14.62□□□□□ -0.07
ERBB3-219ENST00000551242 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.62□□□□□ -0.07
ERBB3-219ENST00000551242 V9GYY5 206 aaPredicted RBP14.62□□□□□ -0.07
ERBB3-219ENST00000551242 CKAP2LQ8IYA6 745 aa14.62□□□□□ -0.07
ERBB3-219ENST00000551242 RASEFQ8IZ41 740 aa14.62□□□□□ -0.07
ERBB3-219ENST00000551242 NAP1L2Q9ULW6 460 aaPredicted RBP14.62□□□□□ -0.07
ERBB3-219ENST00000551242 KIAA0232Q92628 1395 aa14.61□□□□□ -0.07
ERBB3-219ENST00000551242 PTPRCP08575 1304 aa14.61□□□□□ -0.07
ERBB3-219ENST00000551242 NME9Q86XW9 330 aa14.61□□□□□ -0.07
ERBB3-219ENST00000551242 AEBP1Q8IUX7 1158 aa14.61□□□□□ -0.07
ERBB3-219ENST00000551242 FAM200AQ8TCP9 573 aa14.61□□□□□ -0.07
ERBB3-219ENST00000551242 CCDC83Q8IWF9 413 aa14.61□□□□□ -0.07
ERBB3-219ENST00000551242 IL1RAPL2Q9NP60 686 aa14.61□□□□□ -0.07
ERBB3-219ENST00000551242 ATP6V1DQ9Y5K8 247 aa14.61□□□□□ -0.07
ERBB3-219ENST00000551242 SNX14Q9Y5W7 946 aa14.61□□□□□ -0.07
ERBB3-219ENST00000551242 MRVI1Q9Y6F6 885 aa14.61□□□□□ -0.07
ERBB3-219ENST00000551242 LMTK2Q8IWU2 1503 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 VPS37CA5D8V6 355 aaPredicted RBP14.6□□□□□ -0.07
ERBB3-219ENST00000551242 TERF2Q15554 542 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 ZSCAN25Q6NSZ9 544 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 TTC14Q96N46 770 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 MORC2Q9Y6X9 1032 aaPredicted RBP14.6□□□□□ -0.07
ERBB3-219ENST00000551242 ERICH4A6NGS2 130 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 GNAI2P04899 355 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 GJB2P29033 226 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 IRX5P78411 483 aaPredicted RBP14.6□□□□□ -0.07
ERBB3-219ENST00000551242 TYRO3Q06418 890 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 TPD52L1Q16890 204 aaPredicted RBP14.6□□□□□ -0.07
ERBB3-219ENST00000551242 FAM173BQ6P4H8 233 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 TRIM5Q9C035 493 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 LIMCH1Q9UPQ0 1083 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 MTMR6Q9Y217 621 aa14.6□□□□□ -0.07
ERBB3-219ENST00000551242 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.6□□□□□ -0.07
ERBB3-219ENST00000551242 SSH2Q76I76 1423 aa14.59□□□□□ -0.07
ERBB3-219ENST00000551242 LIG1P18858 919 aa14.59□□□□□ -0.07
ERBB3-219ENST00000551242 NUTM1Q86Y26 1132 aa14.59□□□□□ -0.07
ERBB3-219ENST00000551242 IL17RAQ96F46 866 aa14.59□□□□□ -0.07
ERBB3-219ENST00000551242 CHL1O00533 1208 aa14.59□□□□□ -0.07
ERBB3-219ENST00000551242 SYCP1Q15431 976 aa14.59□□□□□ -0.07
ERBB3-219ENST00000551242 ST7Q9NRC1 585 aa14.59□□□□□ -0.07
ERBB3-219ENST00000551242 PTPRMP28827 1452 aa14.58□□□□□ -0.07
ERBB3-219ENST00000551242 KMT5BQ4FZB7 885 aa14.58□□□□□ -0.07
ERBB3-219ENST00000551242 ANO6Q4KMQ2 910 aa14.58□□□□□ -0.07
ERBB3-219ENST00000551242 FERMT3Q86UX7 667 aa14.58□□□□□ -0.07
ERBB3-219ENST00000551242 CBX8Q9HC52 389 aa14.58□□□□□ -0.07
ERBB3-219ENST00000551242 CPSF1Q10570 1443 aaKnown RBP14.58□□□□□ -0.08
ERBB3-219ENST00000551242 KIF20BQ96Q89 1820 aa14.58□□□□□ -0.08
ERBB3-219ENST00000551242 MAP3K11Q16584 847 aa14.58□□□□□ -0.08
ERBB3-219ENST00000551242 DDX54Q8TDD1 881 aaKnown RBP14.58□□□□□ -0.08
ERBB3-219ENST00000551242 CACTINQ8WUQ7 758 aaKnown RBP14.58□□□□□ -0.08
ERBB3-219ENST00000551242 NEXMIFQ5QGS0 1516 aa14.58□□□□□ -0.08
ERBB3-219ENST00000551242 CDK11BP21127 795 aaKnown RBP14.57□□□□□ -0.08
ERBB3-219ENST00000551242 IDI1Q13907 227 aa14.57□□□□□ -0.08
ERBB3-219ENST00000551242 TTC6Q86TZ1 520 aa14.57□□□□□ -0.08
ERBB3-219ENST00000551242 NUP62CLQ9H1M0 184 aa14.57□□□□□ -0.08
ERBB3-219ENST00000551242 CASTP20810 708 aaKnown RBP14.57□□□□□ -0.08
ERBB3-219ENST00000551242 KRT222Q8N1A0 295 aa14.57□□□□□ -0.08
ERBB3-219ENST00000551242 ZNF215Q9UL58 517 aaPredicted RBP14.57□□□□□ -0.08
ERBB3-219ENST00000551242 SPG7Q9UQ90 795 aa14.57□□□□□ -0.08
ERBB3-219ENST00000551242 ZNF75DP51815 510 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 CCDC144BQ3MJ40 725 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 CCDC144CPQ8IYA2 1237 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 PAXBP1Q9Y5B6 917 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 RAD50Q92878 1312 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 USP27XA6NNY8 438 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 HAP1P54257 671 aaPredicted RBP14.56□□□□□ -0.08
ERBB3-219ENST00000551242 CEP135Q66GS9 1140 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 SULT6B1Q6IMI4 303 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 RTF1Q92541 710 aaKnown RBP14.56□□□□□ -0.08
ERBB3-219ENST00000551242 STAP2Q9UGK3 403 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 NPHP1O15259 732 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 CCT4P50991 539 aaKnown RBP14.56□□□□□ -0.08
ERBB3-219ENST00000551242 ARID5BQ14865 1188 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 FBXO31Q5XUX0 539 aaPredicted RBP14.56□□□□□ -0.08
ERBB3-219ENST00000551242 DACT1Q9NYF0 836 aa14.56□□□□□ -0.08
ERBB3-219ENST00000551242 MLH3Q9UHC1 1453 aa14.55□□□□□ -0.08
ERBB3-219ENST00000551242 NECAB1Q8N987 351 aa14.55□□□□□ -0.08
ERBB3-219ENST00000551242 FRMPD1Q5SYB0 1578 aa14.55□□□□□ -0.08
ERBB3-219ENST00000551242 HECW2Q9P2P5 1572 aa14.55□□□□□ -0.08
ERBB3-219ENST00000551242 TUBGCP6Q96RT7 1819 aa14.55□□□□□ -0.08
ERBB3-219ENST00000551242 SGSM2O43147 1006 aa14.55□□□□□ -0.08
ERBB3-219ENST00000551242 PLCD3Q8N3E9 789 aa14.55□□□□□ -0.08
ERBB3-219ENST00000551242 TNMDQ9H2S6 317 aa14.55□□□□□ -0.08
ERBB3-219ENST00000551242 HYPKQ9NX55 129 aa14.55□□□□□ -0.08
ERBB3-219ENST00000551242 CLIP2Q9UDT6 1046 aa14.55□□□□□ -0.08
ERBB3-219ENST00000551242 TSPOAP1O95153 1857 aa14.54□□□□□ -0.08
ERBB3-219ENST00000551242 FBXO38Q6PIJ6 1188 aa14.54□□□□□ -0.08
ERBB3-219ENST00000551242 CWC27Q6UX04 472 aaKnown RBP14.54□□□□□ -0.08
ERBB3-219ENST00000551242 WAPLQ7Z5K2 1190 aa14.54□□□□□ -0.08
ERBB3-219ENST00000551242 PLA2G4DQ86XP0 818 aa14.54□□□□□ -0.08
ERBB3-219ENST00000551242 LSG1Q9H089 658 aaKnown RBP14.54□□□□□ -0.08
ERBB3-219ENST00000551242 CCDC66A2RUB6 948 aa14.54□□□□□ -0.08
ERBB3-219ENST00000551242 ATP8B2P98198 1209 aa14.54□□□□□ -0.08
ERBB3-219ENST00000551242 ELF2Q15723 593 aa14.54□□□□□ -0.08
ERBB3-219ENST00000551242 ZNF397Q8NF99 534 aaPredicted RBP14.54□□□□□ -0.08
ERBB3-219ENST00000551242 NECTIN2Q92692 538 aa14.54□□□□□ -0.08
ERBB3-219ENST00000551242 TRERF1Q96PN7 1200 aa14.54□□□□□ -0.08
ERBB3-219ENST00000551242 LRRFIP2Q9Y608 721 aaKnown RBP14.54□□□□□ -0.08
ERBB3-219ENST00000551242 RBM6P78332 1123 aaKnown RBP14.53□□□□□ -0.08
ERBB3-219ENST00000551242 ST3GAL1Q11201 340 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms