RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 SPIRE2Q8WWL2 714 aa5.58□□□□□ -1.52
CCDC59-204ENST00000550589 CHMP4BQ9H444 224 aaKnown RBP5.58□□□□□ -1.52
CCDC59-204ENST00000550589 YTHDC2Q9H6S0 1430 aaKnown RBP5.58□□□□□ -1.52
CCDC59-204ENST00000550589 HOXA2O43364 376 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 NR1I2O75469 434 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 FAM160A2Q8N612 972 aaPredicted RBP5.57□□□□□ -1.52
CCDC59-204ENST00000550589 SIRT1Q96EB6 747 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 BEGAINQ9BUH8 593 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 BACH2Q9BYV9 841 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 GPBP1L1Q9HC44 474 aaPredicted RBP5.57□□□□□ -1.52
CCDC59-204ENST00000550589 USP32Q8NFA0 1604 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 MROH2AA6NES4 1674 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 MYOM1P52179 1685 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 MED14O60244 1454 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 RICTORQ6R327 1708 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 DIAPH1O60610 1272 aaKnown RBP5.57□□□□□ -1.52
CCDC59-204ENST00000550589 SAFB2Q14151 953 aaKnown RBP eCLIP5.57□□□□□ -1.52
CCDC59-204ENST00000550589 NEUROD2Q15784 382 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 TPRNQ4KMQ1 711 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 BRICD5Q6PL45 260 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 RNF19BQ6ZMZ0 732 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 EMID1Q96A84 441 aaPredicted RBP5.57□□□□□ -1.52
CCDC59-204ENST00000550589 ZNF428Q96B54 188 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 CDK19Q9BWU1 502 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 PCDHGC3Q9UN70 934 aa5.57□□□□□ -1.52
CCDC59-204ENST00000550589 QRICH2Q9H0J4 1663 aa5.56□□□□□ -1.52
CCDC59-204ENST00000550589 U2SURPO15042 1029 aaKnown RBP5.56□□□□□ -1.52
CCDC59-204ENST00000550589 RTL5Q5HYW3 569 aaPredicted RBP5.56□□□□□ -1.52
CCDC59-204ENST00000550589 IL16Q14005 1332 aa5.56□□□□□ -1.52
CCDC59-204ENST00000550589 A0A1W2PP64 1363 aa5.56□□□□□ -1.52
CCDC59-204ENST00000550589 IPO8O15397 1037 aaKnown RBP5.56□□□□□ -1.52
CCDC59-204ENST00000550589 ADH1BP00325 375 aa5.56□□□□□ -1.52
CCDC59-204ENST00000550589 PRKCSHP14314 528 aaPredicted RBP5.56□□□□□ -1.52
CCDC59-204ENST00000550589 FBXO31Q5XUX0 539 aaPredicted RBP5.56□□□□□ -1.52
CCDC59-204ENST00000550589 FTSJ3Q8IY81 847 aaKnown RBP5.56□□□□□ -1.52
CCDC59-204ENST00000550589 CLUAP1Q96AJ1 413 aa5.56□□□□□ -1.52
CCDC59-204ENST00000550589 PPEF1O14829 653 aaPredicted RBP5.55□□□□□ -1.52
CCDC59-204ENST00000550589 FYB1O15117 783 aa5.55□□□□□ -1.52
CCDC59-204ENST00000550589 S1PR4O95977 384 aa5.55□□□□□ -1.52
CCDC59-204ENST00000550589 NDUFV2P19404 249 aa5.55□□□□□ -1.52
CCDC59-204ENST00000550589 RARSP54136 660 aaKnown RBP5.55□□□□□ -1.52
CCDC59-204ENST00000550589 FRAT1Q92837 279 aaPredicted RBP5.55□□□□□ -1.52
CCDC59-204ENST00000550589 SPSB2Q99619 263 aa5.55□□□□□ -1.52
CCDC59-204ENST00000550589 GGNBP2Q9H3C7 697 aa5.55□□□□□ -1.52
CCDC59-204ENST00000550589 RWDD1Q9H446 243 aaPredicted RBP5.55□□□□□ -1.52
CCDC59-204ENST00000550589 UPF2Q9HAU5 1272 aaKnown RBP5.55□□□□□ -1.52
CCDC59-204ENST00000550589 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.55□□□□□ -1.52
CCDC59-204ENST00000550589 CABP1Q9NZU7 370 aa5.55□□□□□ -1.52
CCDC59-204ENST00000550589 KDM2BQ8NHM5 1336 aa5.55□□□□□ -1.52
CCDC59-204ENST00000550589 RIMS2Q9UQ26 1411 aa5.55□□□□□ -1.52
CCDC59-204ENST00000550589 MOXD2PA6NHM9 499 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 RNF223E7ERA6 249 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 PPM1GO15355 546 aaPredicted RBP5.54□□□□□ -1.52
CCDC59-204ENST00000550589 BCAR3O75815 825 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 USP46P62068 366 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 LMOD3Q0VAK6 560 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 KCNMA1Q12791 1236 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 ZKSCAN2Q63HK3 967 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 SYMPKQ92797 1274 aaKnown RBP5.54□□□□□ -1.52
CCDC59-204ENST00000550589 USP35Q9P2H5 1018 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 DLC1Q96QB1 1528 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 DIP2BQ9P265 1576 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 ZMYM3Q14202 1370 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 TMEM131LA2VDJ0 1609 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 PREX1Q8TCU6 1659 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 WASLO00401 505 aaPredicted RBP5.54□□□□□ -1.52
CCDC59-204ENST00000550589 MLECQ14165 292 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 C20orf194Q5TEA3 1177 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 TBC1D2Q9BYX2 928 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 PRDM9Q9NQV7 894 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 EID1Q9Y6B2 187 aa5.54□□□□□ -1.52
CCDC59-204ENST00000550589 PTPRMP28827 1452 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 ATP7BP35670 1465 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 TULP4Q9NRJ4 1543 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 EIF5BO60841 1220 aaKnown RBP5.53□□□□□ -1.52
CCDC59-204ENST00000550589 TMPOP42166 694 aaKnown RBP5.53□□□□□ -1.52
CCDC59-204ENST00000550589 RIPK4P57078 832 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 NPM2Q86SE8 214 aaKnown RBP5.53□□□□□ -1.52
CCDC59-204ENST00000550589 NUTM1Q86Y26 1132 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 COG3Q96JB2 828 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 KDM4CQ9H3R0 1056 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 CFAP65Q6ZU64 1925 aaKnown RBP5.53□□□□□ -1.52
CCDC59-204ENST00000550589 KIF16BQ96L93 1317 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 FAM135BQ49AJ0 1406 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 A2ML1A8K2U0 1454 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 SPATA31D1Q6ZQQ2 1576 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 ALKQ9UM73 1620 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 PLA2G2CQ5R387 149 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 DDX19BQ9UMR2 479 aa5.53□□□□□ -1.52
CCDC59-204ENST00000550589 RRP7AQ9Y3A4 280 aaKnown RBP5.53□□□□□ -1.52
CCDC59-204ENST00000550589 ARHGEF28Q8N1W1 1705 aaKnown RBP5.53□□□□□ -1.52
CCDC59-204ENST00000550589 PNPLA6Q8IY17 1366 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 SIGLEC1Q9BZZ2 1709 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 FMNL1O95466 1100 aaPredicted RBP5.52□□□□□ -1.53
CCDC59-204ENST00000550589 IGHA1P01876 353 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 ALDH1L2Q3SY69 923 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 GRIPAP1Q4V328 841 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 DZIP1LQ8IYY4 767 aaKnown RBP5.52□□□□□ -1.53
CCDC59-204ENST00000550589 FAM117AQ9C073 453 aa5.52□□□□□ -1.53
CCDC59-204ENST00000550589 SMC4Q9NTJ3 1288 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms