RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 BRCA1P38398 1863 aaKnown RBP23.28■■□□□ 1.32
HCFC2-205ENST00000550444 MTHFSDQ2M296 383 aaKnown RBP23.28■■□□□ 1.32
HCFC2-205ENST00000550444 ZBTB1Q9Y2K1 713 aa23.28■■□□□ 1.32
HCFC2-205ENST00000550444 CANXP27824 592 aaKnown RBP23.27■■□□□ 1.32
HCFC2-205ENST00000550444 RASSF7Q02833 373 aa23.27■■□□□ 1.32
HCFC2-205ENST00000550444 FSTL1Q12841 308 aa23.27■■□□□ 1.32
HCFC2-205ENST00000550444 SERPINB2P05120 415 aa23.26■■□□□ 1.31
HCFC2-205ENST00000550444 CCER1Q8TC90 406 aaPredicted RBP23.26■■□□□ 1.31
HCFC2-205ENST00000550444 COL15A1P39059 1388 aa23.26■■□□□ 1.31
HCFC2-205ENST00000550444 ARFGEF1Q9Y6D6 1849 aa23.25■■□□□ 1.31
HCFC2-205ENST00000550444 SCN11AQ9UI33 1791 aa23.24■■□□□ 1.31
HCFC2-205ENST00000550444 DIAPH1O60610 1272 aaKnown RBP23.24■■□□□ 1.31
HCFC2-205ENST00000550444 BICDL1Q6ZP65 573 aa23.24■■□□□ 1.31
HCFC2-205ENST00000550444 BCL2L12Q9HB09 334 aa23.24■■□□□ 1.31
HCFC2-205ENST00000550444 CNGB1Q14028 1251 aaPredicted RBP23.23■■□□□ 1.31
HCFC2-205ENST00000550444 CC2D1BQ5T0F9 858 aaKnown RBP23.23■■□□□ 1.31
HCFC2-205ENST00000550444 C2CD5Q86YS7 1000 aa23.23■■□□□ 1.31
HCFC2-205ENST00000550444 KLRG1Q96E93 195 aa23.23■■□□□ 1.31
HCFC2-205ENST00000550444 VSIG10Q8N0Z9 540 aa23.22■■□□□ 1.31
HCFC2-205ENST00000550444 TTLL6Q8N841 843 aa23.22■■□□□ 1.31
HCFC2-205ENST00000550444 LMNB1P20700 586 aa23.21■■□□□ 1.31
HCFC2-205ENST00000550444 TTC5Q8N0Z6 440 aa23.21■■□□□ 1.31
HCFC2-205ENST00000550444 ADAMTS7Q9UKP4 1686 aa23.21■■□□□ 1.31
HCFC2-205ENST00000550444 H0YIN7 160 aa23.2■■□□□ 1.3
HCFC2-205ENST00000550444 STARD3NLO95772 234 aa23.2■■□□□ 1.3
HCFC2-205ENST00000550444 SMC1BQ8NDV3 1235 aa23.2■■□□□ 1.3
HCFC2-205ENST00000550444 MRC1P22897 1456 aa23.19■■□□□ 1.3
HCFC2-205ENST00000550444 KIF7Q2M1P5 1343 aa23.19■■□□□ 1.3
HCFC2-205ENST00000550444 ZNF330Q9Y3S2 320 aaPredicted RBP23.19■■□□□ 1.3
HCFC2-205ENST00000550444 PRELPP51888 382 aa23.18■■□□□ 1.3
HCFC2-205ENST00000550444 A0A087WZG4 1122 aa23.17■■□□□ 1.3
HCFC2-205ENST00000550444 U2SURPO15042 1029 aaKnown RBP23.17■■□□□ 1.3
HCFC2-205ENST00000550444 ZNF622Q969S3 477 aaKnown RBP eCLIP23.17■■□□□ 1.3
HCFC2-205ENST00000550444 ZNF219Q9P2Y4 722 aaPredicted RBP23.17■■□□□ 1.3
HCFC2-205ENST00000550444 WDR90Q96KV7 1748 aa23.16■■□□□ 1.3
HCFC2-205ENST00000550444 GLTPD2A6NH11 291 aa23.16■■□□□ 1.3
HCFC2-205ENST00000550444 VEGFAP15692 232 aaPredicted RBP23.16■■□□□ 1.3
HCFC2-205ENST00000550444 EIF5P55010 431 aaKnown RBP23.16■■□□□ 1.3
HCFC2-205ENST00000550444 TEFQ10587 303 aa23.16■■□□□ 1.3
HCFC2-205ENST00000550444 CARMIL3Q8ND23 1372 aa23.15■■□□□ 1.3
HCFC2-205ENST00000550444 ZC3H4Q9UPT8 1303 aaKnown RBP23.15■■□□□ 1.3
HCFC2-205ENST00000550444 TBC1D9BQ66K14 1250 aa23.15■■□□□ 1.3
HCFC2-205ENST00000550444 CCDC24Q8N4L8 307 aa23.15■■□□□ 1.3
HCFC2-205ENST00000550444 JMYQ8N9B5 988 aa23.15■■□□□ 1.3
HCFC2-205ENST00000550444 ZNF496Q96IT1 587 aaPredicted RBP23.15■■□□□ 1.3
HCFC2-205ENST00000550444 NFKBIEO00221 500 aa23.14■■□□□ 1.29
HCFC2-205ENST00000550444 PER1O15534 1290 aaPredicted RBP23.14■■□□□ 1.29
HCFC2-205ENST00000550444 IL17REQ8NFR9 667 aa23.14■■□□□ 1.29
HCFC2-205ENST00000550444 TBC1D2BQ9UPU7 963 aa23.14■■□□□ 1.29
HCFC2-205ENST00000550444 SBF1O95248 1867 aa23.13■■□□□ 1.29
HCFC2-205ENST00000550444 ZNF790Q6PG37 636 aa23.13■■□□□ 1.29
HCFC2-205ENST00000550444 AFDNP55196 1824 aaKnown RBP23.12■■□□□ 1.29
HCFC2-205ENST00000550444 GNAT3A8MTJ3 354 aa23.12■■□□□ 1.29
HCFC2-205ENST00000550444 C21orf2O43822 256 aa23.12■■□□□ 1.29
HCFC2-205ENST00000550444 COL13A1Q5TAT6 717 aaPredicted RBP23.12■■□□□ 1.29
HCFC2-205ENST00000550444 TEX13AQ9BXU3 409 aaPredicted RBP23.12■■□□□ 1.29
HCFC2-205ENST00000550444 NPM2Q86SE8 214 aaKnown RBP23.11■■□□□ 1.29
HCFC2-205ENST00000550444 GAS2L2Q8NHY3 880 aa23.11■■□□□ 1.29
HCFC2-205ENST00000550444 TNRC6CQ9HCJ0 1690 aaKnown RBP23.1■■□□□ 1.29
HCFC2-205ENST00000550444 NPHP1O15259 732 aa23.1■■□□□ 1.29
HCFC2-205ENST00000550444 A1BGP04217 495 aa23.1■■□□□ 1.29
HCFC2-205ENST00000550444 PDE6BP35913 854 aa23.1■■□□□ 1.29
HCFC2-205ENST00000550444 DPY19L2Q6NUT2 758 aa23.1■■□□□ 1.29
HCFC2-205ENST00000550444 BRIP1Q9BX63 1249 aa23.1■■□□□ 1.29
HCFC2-205ENST00000550444 HEG1Q9ULI3 1381 aa23.1■■□□□ 1.29
HCFC2-205ENST00000550444 NRXN2Q9P2S2 1712 aa23.1■■□□□ 1.29
HCFC2-205ENST00000550444 PRR5LQ6MZQ0 368 aa23.09■■□□□ 1.29
HCFC2-205ENST00000550444 IL6STP40189 918 aaPredicted RBP23.08■■□□□ 1.29
HCFC2-205ENST00000550444 FMNL2Q96PY5 1086 aa23.08■■□□□ 1.29
HCFC2-205ENST00000550444 ERFEQ4G0M1 354 aa23.07■■□□□ 1.28
HCFC2-205ENST00000550444 SETDB2Q96T68 719 aa23.07■■□□□ 1.28
HCFC2-205ENST00000550444 PDZRN3Q9UPQ7 1066 aa23.07■■□□□ 1.28
HCFC2-205ENST00000550444 BTBD11A6QL63 1104 aa23.05■■□□□ 1.28
HCFC2-205ENST00000550444 POTECB2RU33 542 aa23.05■■□□□ 1.28
HCFC2-205ENST00000550444 KCNQ3O43525 872 aa23.05■■□□□ 1.28
HCFC2-205ENST00000550444 CAPN15O75808 1086 aa23.05■■□□□ 1.28
HCFC2-205ENST00000550444 CNBD1Q8NA66 436 aa23.05■■□□□ 1.28
HCFC2-205ENST00000550444 VIRMAQ69YN4 1812 aaKnown RBP23.04■■□□□ 1.28
HCFC2-205ENST00000550444 CAMTA2O94983 1202 aa23.04■■□□□ 1.28
HCFC2-205ENST00000550444 PIP4K2AP48426 406 aaPredicted RBP23.03■■□□□ 1.28
HCFC2-205ENST00000550444 ST5P78524 1137 aa23.03■■□□□ 1.28
HCFC2-205ENST00000550444 DZIP3Q86Y13 1208 aaKnown RBP23.03■■□□□ 1.28
HCFC2-205ENST00000550444 PHACTR3Q96KR7 559 aa23.03■■□□□ 1.28
HCFC2-205ENST00000550444 UBR2Q8IWV8 1755 aa23.03■■□□□ 1.28
HCFC2-205ENST00000550444 DLEC1Q9Y238 1755 aa23.03■■□□□ 1.28
HCFC2-205ENST00000550444 TNS4Q8IZW8 715 aa23.02■■□□□ 1.28
HCFC2-205ENST00000550444 CNKSR1Q969H4 720 aa23.02■■□□□ 1.28
HCFC2-205ENST00000550444 TAOK3Q9H2K8 898 aa23.02■■□□□ 1.28
HCFC2-205ENST00000550444 PRKAR2BP31323 418 aa23.01■■□□□ 1.27
HCFC2-205ENST00000550444 USP16Q9Y5T5 823 aa23.01■■□□□ 1.27
HCFC2-205ENST00000550444 COL3A1P02461 1466 aaPredicted RBP23■■□□□ 1.27
HCFC2-205ENST00000550444 HSPA1AP0DMV8 641 aaKnown RBP23■■□□□ 1.27
HCFC2-205ENST00000550444 HSPA1BP0DMV9 641 aaKnown RBP23■■□□□ 1.27
HCFC2-205ENST00000550444 STYK1Q6J9G0 422 aa23■■□□□ 1.27
HCFC2-205ENST00000550444 DDNO94850 711 aaPredicted RBP22.99■■□□□ 1.27
HCFC2-205ENST00000550444 SRGNP10124 158 aa22.99■■□□□ 1.27
HCFC2-205ENST00000550444 PRPF40BQ6NWY9 871 aaKnown RBP22.99■■□□□ 1.27
HCFC2-205ENST00000550444 MASTLQ96GX5 879 aa22.99■■□□□ 1.27
HCFC2-205ENST00000550444 CFAP53Q96M91 514 aa22.99■■□□□ 1.27
HCFC2-205ENST00000550444 TIAM2Q8IVF5 1701 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms