RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 IGSF3O75054 1194 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 ZSCAN22P10073 491 aaPredicted RBP18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 CCDC158Q5M9N0 1113 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 SYTL4Q96C24 671 aaPredicted RBP18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 CTNNA3Q9UI47 895 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 SYCP2Q9BX26 1530 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 PLCH2O75038 1416 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 TERF1P54274 439 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 TRAPPC8Q9Y2L5 1435 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 KIAA1328Q86T90 577 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 FEZ1Q99689 392 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 PARD3Q8TEW0 1356 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 DISP3Q9P2K9 1392 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 RNF123Q5XPI4 1314 aa18.43■□□□□ 0.54
RBFOX1-212ENST00000550418 MCM3P25205 808 aa18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 RRS1Q15050 365 aaKnown RBP18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 CEBPAP49715 358 aaPredicted RBP18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 FSIP1Q8NA03 581 aa18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 POTEB2H3BUK9 544 aa18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 SKILP12757 684 aa18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 SDSP20132 328 aa18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 SF3B2Q13435 895 aaKnown RBP18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 ABTB2Q8N961 1025 aa18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 ZNF692Q9BU19 519 aaPredicted RBP18.42■□□□□ 0.54
RBFOX1-212ENST00000550418 CFAP43Q8NDM7 1665 aa18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 NUTM2BA6NNL0 878 aaPredicted RBP18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 NUTM2EB1AL46 878 aaPredicted RBP18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 G3V3G9 751 aa18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 ESCO1Q5FWF5 840 aa18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 DCAF8Q5TAQ9 597 aa18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 NUTM2AQ8IVF1 878 aaPredicted RBP18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 GOLGA6L9A6NEM1 432 aa18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 RAD21O60216 631 aa18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 SMARCC1Q92922 1105 aaPredicted RBP18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 PLEKHO1Q53GL0 409 aaPredicted RBP18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 FYB1O15117 783 aa18.41■□□□□ 0.54
RBFOX1-212ENST00000550418 KIF20AO95235 890 aa18.4■□□□□ 0.54
RBFOX1-212ENST00000550418 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.4■□□□□ 0.54
RBFOX1-212ENST00000550418 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
RBFOX1-212ENST00000550418 TCOF1Q13428 1488 aaKnown RBP18.4■□□□□ 0.54
RBFOX1-212ENST00000550418 CCDC150Q8NCX0 1101 aa18.4■□□□□ 0.54
RBFOX1-212ENST00000550418 TTC39AQ5SRH9 613 aa18.39■□□□□ 0.54
RBFOX1-212ENST00000550418 GPATCH11Q8N954 259 aa18.39■□□□□ 0.54
RBFOX1-212ENST00000550418 OGFRQ9NZT2 677 aa18.39■□□□□ 0.54
RBFOX1-212ENST00000550418 ABCA5Q8WWZ7 1642 aa18.39■□□□□ 0.53
RBFOX1-212ENST00000550418 SPG7Q9UQ90 795 aa18.39■□□□□ 0.53
RBFOX1-212ENST00000550418 EIF5P55010 431 aaKnown RBP18.39■□□□□ 0.53
RBFOX1-212ENST00000550418 NOS1P29475 1434 aa18.39■□□□□ 0.53
RBFOX1-212ENST00000550418 ASXL2Q76L83 1435 aa18.39■□□□□ 0.53
RBFOX1-212ENST00000550418 CCDC69A6NI79 296 aa18.39■□□□□ 0.53
RBFOX1-212ENST00000550418 SLU7O95391 586 aaKnown RBP18.39■□□□□ 0.53
RBFOX1-212ENST00000550418 SLC3A2P08195 630 aaKnown RBP18.39■□□□□ 0.53
RBFOX1-212ENST00000550418 IL16Q14005 1332 aa18.39■□□□□ 0.53
RBFOX1-212ENST00000550418 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.53
RBFOX1-212ENST00000550418 F6X3S4 739 aa18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 CDK5RAP3Q96JB5 506 aa18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 RBSNQ9H1K0 784 aa18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 ZNF397Q8NF99 534 aaPredicted RBP18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 KDM2BQ8NHM5 1336 aa18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 GNG11P61952 73 aa18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 ANO6Q4KMQ2 910 aa18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 MCM10Q7L590 875 aa18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 CCAR1Q8IX12 1150 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 ARFGAP3Q9NP61 516 aa18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 MIS18AQ9NYP9 233 aa18.38■□□□□ 0.53
RBFOX1-212ENST00000550418 RLBP1P12271 317 aa18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 ANAPC15P60006 121 aa18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 ARHGAP45Q92619 1136 aa18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 C8orf76Q96K31 380 aa18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 GUCY1B3Q02153 619 aa18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 DHX37Q8IY37 1157 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 IPO4Q8TEX9 1081 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 KLHL34Q8N239 644 aa18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 V9GYY5 206 aaPredicted RBP18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 NUP160Q12769 1436 aa18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 BIN1O00499 593 aa18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 IMMTQ16891 758 aaKnown RBP18.37■□□□□ 0.53
RBFOX1-212ENST00000550418 TAX1BP1Q86VP1 789 aa18.36■□□□□ 0.53
RBFOX1-212ENST00000550418 TMX1Q9H3N1 280 aa18.36■□□□□ 0.53
RBFOX1-212ENST00000550418 NLRP2Q9NX02 1062 aa18.36■□□□□ 0.53
RBFOX1-212ENST00000550418 MTMR7Q9Y216 660 aa18.36■□□□□ 0.53
RBFOX1-212ENST00000550418 BOLA2Q9H3K6 86 aa18.36■□□□□ 0.53
RBFOX1-212ENST00000550418 PTPRCP08575 1304 aa18.36■□□□□ 0.53
RBFOX1-212ENST00000550418 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 ZFYVE27Q5T4F4 411 aa18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 KLHL10Q6JEL2 608 aa18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 TANGO6Q9C0B7 1094 aa18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 TNNQ9UQP3 1299 aa18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 FAM177BA6PVY3 158 aa18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 GTF2A1P52655 376 aaPredicted RBP18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 ZGPATQ8N5A5 531 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 WASF1Q92558 559 aa18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 RBM33Q96EV2 1170 aaKnown RBP18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 RAI14Q9P0K7 980 aa18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 NUP133Q8WUM0 1156 aa18.35■□□□□ 0.53
RBFOX1-212ENST00000550418 NUDT16Q96DE0 195 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms