RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 KRT24Q2M2I5 525 aa9.84□□□□□ -0.83
RNF41-208ENST00000550379 STK31Q9BXU1 1019 aa9.84□□□□□ -0.83
RNF41-208ENST00000550379 USP16Q9Y5T5 823 aa9.84□□□□□ -0.83
RNF41-208ENST00000550379 COL5A3P25940 1745 aaPredicted RBP9.84□□□□□ -0.83
RNF41-208ENST00000550379 TJP1Q07157 1748 aa9.84□□□□□ -0.83
RNF41-208ENST00000550379 A0A0G2JS52 829 aa9.83□□□□□ -0.84
RNF41-208ENST00000550379 IL6STP40189 918 aaPredicted RBP9.83□□□□□ -0.84
RNF41-208ENST00000550379 RRP1P56182 461 aaKnown RBP9.83□□□□□ -0.84
RNF41-208ENST00000550379 MYT1Q01538 1121 aa9.83□□□□□ -0.84
RNF41-208ENST00000550379 ZKSCAN2Q63HK3 967 aa9.83□□□□□ -0.84
RNF41-208ENST00000550379 ATF7IPQ6VMQ6 1270 aa9.83□□□□□ -0.84
RNF41-208ENST00000550379 API5Q9BZZ5 524 aaKnown RBP9.83□□□□□ -0.84
RNF41-208ENST00000550379 TAF1LQ8IZX4 1826 aa9.83□□□□□ -0.84
RNF41-208ENST00000550379 PXDNLA1KZ92 1463 aa9.83□□□□□ -0.84
RNF41-208ENST00000550379 MYH14Q7Z406 1995 aaKnown RBP9.83□□□□□ -0.84
RNF41-208ENST00000550379 BCAR3O75815 825 aa9.82□□□□□ -0.84
RNF41-208ENST00000550379 SLC4A2P04920 1241 aa9.82□□□□□ -0.84
RNF41-208ENST00000550379 INTS3Q68E01 1043 aaKnown RBP9.82□□□□□ -0.84
RNF41-208ENST00000550379 SMC4Q9NTJ3 1288 aa9.82□□□□□ -0.84
RNF41-208ENST00000550379 TNS1Q9HBL0 1735 aaKnown RBP9.82□□□□□ -0.84
RNF41-208ENST00000550379 ABCC4O15439 1325 aa9.82□□□□□ -0.84
RNF41-208ENST00000550379 EP400Q96L91 3159 aa9.81□□□□□ -0.84
RNF41-208ENST00000550379 N4BP2Q86UW6 1770 aaPredicted RBP9.81□□□□□ -0.84
RNF41-208ENST00000550379 ELL2O00472 640 aaPredicted RBP9.81□□□□□ -0.84
RNF41-208ENST00000550379 PTCD1O75127 700 aaKnown RBP9.81□□□□□ -0.84
RNF41-208ENST00000550379 EIF5P55010 431 aaKnown RBP9.81□□□□□ -0.84
RNF41-208ENST00000550379 FLIIQ13045 1269 aa9.81□□□□□ -0.84
RNF41-208ENST00000550379 TRIM28Q13263 835 aaKnown RBP9.81□□□□□ -0.84
RNF41-208ENST00000550379 SYTL4Q96C24 671 aaPredicted RBP9.81□□□□□ -0.84
RNF41-208ENST00000550379 ACSBG1Q96GR2 724 aa9.81□□□□□ -0.84
RNF41-208ENST00000550379 CHMP4BQ9H444 224 aaKnown RBP9.81□□□□□ -0.84
RNF41-208ENST00000550379 SUPT16HQ9Y5B9 1047 aaKnown RBP9.81□□□□□ -0.84
RNF41-208ENST00000550379 ATP10DQ9P241 1426 aa9.81□□□□□ -0.84
RNF41-208ENST00000550379 NBPF26B4DH59 902 aa9.8□□□□□ -0.84
RNF41-208ENST00000550379 ERVV-1B6SEH8 477 aa9.8□□□□□ -0.84
RNF41-208ENST00000550379 TRIM27P14373 513 aa9.8□□□□□ -0.84
RNF41-208ENST00000550379 ADRA2BP18089 450 aa9.8□□□□□ -0.84
RNF41-208ENST00000550379 NBPF14Q5TI25 921 aa9.8□□□□□ -0.84
RNF41-208ENST00000550379 NBPF10Q6P3W6 841 aaKnown RBP9.8□□□□□ -0.84
RNF41-208ENST00000550379 INTS5Q6P9B9 1019 aaKnown RBP9.8□□□□□ -0.84
RNF41-208ENST00000550379 DNAJC10Q8IXB1 793 aa9.8□□□□□ -0.84
RNF41-208ENST00000550379 NBPF15Q8N660 670 aa9.8□□□□□ -0.84
RNF41-208ENST00000550379 CHPF2Q9P2E5 772 aa9.8□□□□□ -0.84
RNF41-208ENST00000550379 RPS6KA4O75676 772 aa9.79□□□□□ -0.84
RNF41-208ENST00000550379 TRIM37O94972 964 aa9.79□□□□□ -0.84
RNF41-208ENST00000550379 DDX58O95786 925 aaKnown RBP9.79□□□□□ -0.84
RNF41-208ENST00000550379 ATP6V1AP38606 617 aa9.79□□□□□ -0.84
RNF41-208ENST00000550379 ITPK1Q13572 414 aa9.79□□□□□ -0.84
RNF41-208ENST00000550379 KSR2Q6VAB6 950 aa9.79□□□□□ -0.84
RNF41-208ENST00000550379 PTF1AQ7RTS3 328 aa9.79□□□□□ -0.84
RNF41-208ENST00000550379 PROM2Q8N271 834 aa9.79□□□□□ -0.84
RNF41-208ENST00000550379 PLBD2Q8NHP8 589 aa9.79□□□□□ -0.84
RNF41-208ENST00000550379 CCDC87Q9NVE4 849 aa9.79□□□□□ -0.84
RNF41-208ENST00000550379 NOB1Q9ULX3 412 aaKnown RBP9.79□□□□□ -0.84
RNF41-208ENST00000550379 COL15A1P39059 1388 aa9.78□□□□□ -0.84
RNF41-208ENST00000550379 PRAMEF22A3QJZ6 481 aa9.78□□□□□ -0.84
RNF41-208ENST00000550379 CRKLP46109 303 aaKnown RBP9.78□□□□□ -0.84
RNF41-208ENST00000550379 CCT4P50991 539 aaKnown RBP9.78□□□□□ -0.84
RNF41-208ENST00000550379 CLEC4GQ6UXB4 293 aa9.78□□□□□ -0.84
RNF41-208ENST00000550379 DZIP1LQ8IYY4 767 aaKnown RBP9.78□□□□□ -0.84
RNF41-208ENST00000550379 CAMKK2Q96RR4 588 aa9.78□□□□□ -0.84
RNF41-208ENST00000550379 RBM42Q9BTD8 480 aaKnown RBP9.78□□□□□ -0.84
RNF41-208ENST00000550379 A0A087WZG4 1122 aa9.77□□□□□ -0.85
RNF41-208ENST00000550379 ALDH1L1O75891 902 aa9.77□□□□□ -0.85
RNF41-208ENST00000550379 EIF2S2P20042 333 aaKnown RBP9.77□□□□□ -0.85
RNF41-208ENST00000550379 TXNRD1Q16881 649 aa9.77□□□□□ -0.85
RNF41-208ENST00000550379 FAM182BQ5T319 152 aa9.77□□□□□ -0.85
RNF41-208ENST00000550379 ANKRD13DQ6ZTN6 518 aa9.77□□□□□ -0.85
RNF41-208ENST00000550379 G2E3Q7L622 706 aa9.77□□□□□ -0.85
RNF41-208ENST00000550379 LRRC4BQ9NT99 713 aa9.77□□□□□ -0.85
RNF41-208ENST00000550379 CCNL1Q9UK58 526 aaPredicted RBP9.77□□□□□ -0.85
RNF41-208ENST00000550379 DDX19BQ9UMR2 479 aa9.77□□□□□ -0.85
RNF41-208ENST00000550379 UTYO14607 1347 aa9.77□□□□□ -0.85
RNF41-208ENST00000550379 ADCY9O60503 1353 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 QSER1Q2KHR3 1735 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 A1BGP04217 495 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 MVPQ14764 893 aaKnown RBP9.76□□□□□ -0.85
RNF41-208ENST00000550379 PROSER3Q2NL68 480 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 COPS6Q7L5N1 327 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 LINC00116Q8NCU8 138 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 FLAD1Q8NFF5 587 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 LINS1Q8NG48 757 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 DNAAF4Q8WXU2 420 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 UBR3Q6ZT12 1888 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 C4BP0C0L5 1744 aa9.76□□□□□ -0.85
RNF41-208ENST00000550379 PI4KAP2A4QPH2 592 aa9.75□□□□□ -0.85
RNF41-208ENST00000550379 ZBTB7BO15156 539 aaPredicted RBP9.75□□□□□ -0.85
RNF41-208ENST00000550379 APBA3O96018 575 aa9.75□□□□□ -0.85
RNF41-208ENST00000550379 RLBP1P12271 317 aa9.75□□□□□ -0.85
RNF41-208ENST00000550379 SSFA2P28290 1259 aa9.75□□□□□ -0.85
RNF41-208ENST00000550379 FKBP5Q13451 457 aaPredicted RBP9.75□□□□□ -0.85
RNF41-208ENST00000550379 HSP90AB3PQ58FF7 597 aa9.75□□□□□ -0.85
RNF41-208ENST00000550379 BEND3Q5T5X7 828 aa9.75□□□□□ -0.85
RNF41-208ENST00000550379 GIGYF2Q6Y7W6 1299 aaKnown RBP9.75□□□□□ -0.85
RNF41-208ENST00000550379 PI4KAP1Q8N8J0 262 aa9.75□□□□□ -0.85
RNF41-208ENST00000550379 AKT1S1Q96B36 256 aa9.75□□□□□ -0.85
RNF41-208ENST00000550379 METTL22Q9BUU2 404 aaPredicted RBP9.75□□□□□ -0.85
RNF41-208ENST00000550379 BCL2L13Q9BXK5 485 aa9.75□□□□□ -0.85
RNF41-208ENST00000550379 PHAXQ9H814 394 aaKnown RBP9.75□□□□□ -0.85
RNF41-208ENST00000550379 HDAC5Q9UQL6 1122 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms