RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 RNF135Q8IUD6 432 aa9.69□□□□□ -0.86
EFCAB11-203ENST00000550103 DEPDC4Q8N2C3 294 aa9.69□□□□□ -0.86
EFCAB11-203ENST00000550103 PHTF2Q8N3S3 785 aa9.69□□□□□ -0.86
EFCAB11-203ENST00000550103 CLP1Q92989 425 aaKnown RBP9.69□□□□□ -0.86
EFCAB11-203ENST00000550103 TRIM52Q96A61 297 aa9.69□□□□□ -0.86
EFCAB11-203ENST00000550103 UGGT1Q9NYU2 1555 aa9.68□□□□□ -0.86
EFCAB11-203ENST00000550103 A2ML1A8K2U0 1454 aa9.68□□□□□ -0.86
EFCAB11-203ENST00000550103 TNRQ92752 1358 aa9.68□□□□□ -0.86
EFCAB11-203ENST00000550103 EMP3P54852 163 aa9.68□□□□□ -0.86
EFCAB11-203ENST00000550103 KCNH2Q12809 1159 aa9.68□□□□□ -0.86
EFCAB11-203ENST00000550103 NCOA4Q13772 614 aa9.68□□□□□ -0.86
EFCAB11-203ENST00000550103 PLPP7Q8NBV4 271 aa9.68□□□□□ -0.86
EFCAB11-203ENST00000550103 TSR3Q9UJK0 312 aaKnown RBP9.68□□□□□ -0.86
EFCAB11-203ENST00000550103 NEURL4Q96JN8 1562 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 ADGRB3O60242 1522 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 NLRP1Q9C000 1473 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 SOWAHBA6NEL2 793 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 GOLGA8CPA6NN73 597 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 HSPA2P54652 639 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 SWI5Q1ZZU3 235 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 EML3Q32P44 896 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 TRIM50Q86XT4 487 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 ANKMY2Q8IV38 441 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 STAC3Q96MF2 364 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 PCDHB9Q9Y5E1 797 aa9.67□□□□□ -0.86
EFCAB11-203ENST00000550103 DXOO77932 396 aaKnown RBP9.66□□□□□ -0.86
EFCAB11-203ENST00000550103 APLP1P51693 650 aa9.66□□□□□ -0.86
EFCAB11-203ENST00000550103 ADGRD1Q6QNK2 874 aa9.66□□□□□ -0.86
EFCAB11-203ENST00000550103 NUDT12Q9BQG2 462 aa9.66□□□□□ -0.86
EFCAB11-203ENST00000550103 HPS5Q9UPZ3 1129 aa9.66□□□□□ -0.86
EFCAB11-203ENST00000550103 RPRD2Q5VT52 1461 aaKnown RBP9.66□□□□□ -0.86
EFCAB11-203ENST00000550103 CLTCL1P53675 1640 aa9.65□□□□□ -0.86
EFCAB11-203ENST00000550103 ATP1A2P50993 1020 aa9.65□□□□□ -0.86
EFCAB11-203ENST00000550103 ARHGAP31Q2M1Z3 1444 aa9.65□□□□□ -0.87
EFCAB11-203ENST00000550103 RBM47A0AV96 593 aaKnown RBP9.64□□□□□ -0.87
EFCAB11-203ENST00000550103 MMP16P51512 607 aa9.64□□□□□ -0.87
EFCAB11-203ENST00000550103 MPHOSPH9Q99550 1183 aa9.64□□□□□ -0.87
EFCAB11-203ENST00000550103 PLA2R1Q13018 1463 aa9.64□□□□□ -0.87
EFCAB11-203ENST00000550103 TMEM131LA2VDJ0 1609 aa9.64□□□□□ -0.87
EFCAB11-203ENST00000550103 HRO43593 1189 aa9.63□□□□□ -0.87
EFCAB11-203ENST00000550103 LARGE2Q8N3Y3 721 aa9.63□□□□□ -0.87
EFCAB11-203ENST00000550103 OTUD5Q96G74 571 aa9.63□□□□□ -0.87
EFCAB11-203ENST00000550103 SPSB2Q99619 263 aa9.63□□□□□ -0.87
EFCAB11-203ENST00000550103 OCSTAMPQ9BR26 566 aa9.63□□□□□ -0.87
EFCAB11-203ENST00000550103 ARHGAP9Q9BRR9 750 aa9.63□□□□□ -0.87
EFCAB11-203ENST00000550103 NOD1Q9Y239 953 aa9.63□□□□□ -0.87
EFCAB11-203ENST00000550103 TONSLQ96HA7 1378 aa9.63□□□□□ -0.87
EFCAB11-203ENST00000550103 IFT172Q9UG01 1749 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 FAM205CA6NFA0 338 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 ST18O60284 1047 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 ATP2B4P23634 1241 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 TRAF7Q6Q0C0 670 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 ZBTB33Q86T24 672 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 OGFOD1Q8N543 542 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 C1orf216Q8TAB5 229 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 ADAM32Q8TC27 787 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 STRCP1A6NGW2 1772 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 NUP155O75694 1391 aa9.62□□□□□ -0.87
EFCAB11-203ENST00000550103 TRPM2O94759 1503 aa9.61□□□□□ -0.87
EFCAB11-203ENST00000550103 PPLO60437 1756 aa9.61□□□□□ -0.87
EFCAB11-203ENST00000550103 SOWAHDA6NJG2 315 aa9.61□□□□□ -0.87
EFCAB11-203ENST00000550103 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
EFCAB11-203ENST00000550103 DPYDQ12882 1025 aa9.61□□□□□ -0.87
EFCAB11-203ENST00000550103 FAM160A2Q8N612 972 aaPredicted RBP9.61□□□□□ -0.87
EFCAB11-203ENST00000550103 DNAAF2Q9NVR5 837 aaKnown RBP9.61□□□□□ -0.87
EFCAB11-203ENST00000550103 NOS1P29475 1434 aa9.6□□□□□ -0.87
EFCAB11-203ENST00000550103 SLAIN2Q9P270 581 aa9.6□□□□□ -0.87
EFCAB11-203ENST00000550103 DZIP3Q86Y13 1208 aaKnown RBP9.59□□□□□ -0.87
EFCAB11-203ENST00000550103 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
EFCAB11-203ENST00000550103 XIRP1Q702N8 1843 aaKnown RBP9.59□□□□□ -0.88
EFCAB11-203ENST00000550103 SLIT1O75093 1534 aa9.58□□□□□ -0.88
EFCAB11-203ENST00000550103 BCAMP50895 628 aa9.58□□□□□ -0.88
EFCAB11-203ENST00000550103 CLDN10P78369 228 aa9.58□□□□□ -0.88
EFCAB11-203ENST00000550103 RNF20Q5VTR2 975 aa9.58□□□□□ -0.88
EFCAB11-203ENST00000550103 DNAJC14Q6Y2X3 702 aaPredicted RBP9.58□□□□□ -0.88
EFCAB11-203ENST00000550103 SH3BP5LQ7L8J4 393 aa9.58□□□□□ -0.88
EFCAB11-203ENST00000550103 SIX5Q8N196 739 aa9.58□□□□□ -0.88
EFCAB11-203ENST00000550103 ANKRD30BQ9BXX2 1392 aa9.58□□□□□ -0.88
EFCAB11-203ENST00000550103 WNT2BQ93097 391 aa9.57□□□□□ -0.88
EFCAB11-203ENST00000550103 MARVELD3Q96A59 401 aa9.57□□□□□ -0.88
EFCAB11-203ENST00000550103 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
EFCAB11-203ENST00000550103 DOLKQ9UPQ8 538 aa9.57□□□□□ -0.88
EFCAB11-203ENST00000550103 SCAF11Q99590 1463 aaKnown RBP9.56□□□□□ -0.88
EFCAB11-203ENST00000550103 SEC13P55735 322 aa9.56□□□□□ -0.88
EFCAB11-203ENST00000550103 NEUROD1Q13562 356 aa9.56□□□□□ -0.88
EFCAB11-203ENST00000550103 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
EFCAB11-203ENST00000550103 ZNF594Q96JF6 807 aaPredicted RBP9.56□□□□□ -0.88
EFCAB11-203ENST00000550103 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
EFCAB11-203ENST00000550103 PTPRTO14522 1441 aa9.56□□□□□ -0.88
EFCAB11-203ENST00000550103 ARHGAP23Q9P227 1491 aa9.55□□□□□ -0.88
EFCAB11-203ENST00000550103 CHD2O14647 1828 aaKnown RBP9.55□□□□□ -0.88
EFCAB11-203ENST00000550103 SERPINB4P48594 390 aa9.55□□□□□ -0.88
EFCAB11-203ENST00000550103 HS3ST6Q96QI5 342 aa9.55□□□□□ -0.88
EFCAB11-203ENST00000550103 EGFL7Q9UHF1 273 aa9.55□□□□□ -0.88
EFCAB11-203ENST00000550103 SETD1AO15047 1707 aaKnown RBP9.54□□□□□ -0.88
EFCAB11-203ENST00000550103 NRXN3Q9Y4C0 1643 aa9.54□□□□□ -0.88
EFCAB11-203ENST00000550103 ZBTB7BO15156 539 aaPredicted RBP9.54□□□□□ -0.88
EFCAB11-203ENST00000550103 DKK1O94907 266 aa9.54□□□□□ -0.88
EFCAB11-203ENST00000550103 MARSP56192 900 aaKnown RBP9.54□□□□□ -0.88
EFCAB11-203ENST00000550103 SIN3AQ96ST3 1273 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms