RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 CHPF2Q9P2E5 772 aa22.17■■□□□ 1.14
LETMD1-220ENST00000549686 USP16Q9Y5T5 823 aa22.17■■□□□ 1.14
LETMD1-220ENST00000549686 BRWD3Q6RI45 1802 aa22.17■■□□□ 1.14
LETMD1-220ENST00000549686 LOC102724428A0A0B4J2F2 783 aa22.16■■□□□ 1.14
LETMD1-220ENST00000549686 HMGB2P26583 209 aaKnown RBP22.16■■□□□ 1.14
LETMD1-220ENST00000549686 SIK1P57059 783 aa22.16■■□□□ 1.14
LETMD1-220ENST00000549686 LAMB4A4D0S4 1761 aa22.15■■□□□ 1.14
LETMD1-220ENST00000549686 TRIM27P14373 513 aa22.15■■□□□ 1.14
LETMD1-220ENST00000549686 FLIIQ13045 1269 aa22.15■■□□□ 1.14
LETMD1-220ENST00000549686 FTSJ3Q8IY81 847 aaKnown RBP22.15■■□□□ 1.14
LETMD1-220ENST00000549686 DZIP1LQ8IYY4 767 aaKnown RBP22.15■■□□□ 1.14
LETMD1-220ENST00000549686 KAT6BQ8WYB5 2073 aa22.15■■□□□ 1.14
LETMD1-220ENST00000549686 DNAJC10Q8IXB1 793 aa22.14■■□□□ 1.13
LETMD1-220ENST00000549686 ATP6V1AP38606 617 aa22.13■■□□□ 1.13
LETMD1-220ENST00000549686 FKBP8Q14318 412 aa22.13■■□□□ 1.13
LETMD1-220ENST00000549686 PDIA6Q15084 440 aa22.13■■□□□ 1.13
LETMD1-220ENST00000549686 C5P01031 1676 aa22.13■■□□□ 1.13
LETMD1-220ENST00000549686 CICQ96RK0 1608 aaPredicted RBP22.13■■□□□ 1.13
LETMD1-220ENST00000549686 CACNA1FO60840 1977 aa22.12■■□□□ 1.13
LETMD1-220ENST00000549686 ZNF831Q5JPB2 1677 aa22.12■■□□□ 1.13
LETMD1-220ENST00000549686 SLC4A9Q96Q91 983 aa22.12■■□□□ 1.13
LETMD1-220ENST00000549686 SBF2Q86WG5 1849 aa22.12■■□□□ 1.13
LETMD1-220ENST00000549686 DDX58O95786 925 aaKnown RBP22.11■■□□□ 1.13
LETMD1-220ENST00000549686 CYP19A1P11511 503 aaPredicted RBP22.11■■□□□ 1.13
LETMD1-220ENST00000549686 BTAF1O14981 1849 aa22.1■■□□□ 1.13
LETMD1-220ENST00000549686 ABCC4O15439 1325 aa22.1■■□□□ 1.13
LETMD1-220ENST00000549686 TRIM37O94972 964 aa22.1■■□□□ 1.13
LETMD1-220ENST00000549686 FKBP5Q13451 457 aaPredicted RBP22.1■■□□□ 1.13
LETMD1-220ENST00000549686 G2E3Q7L622 706 aa22.1■■□□□ 1.13
LETMD1-220ENST00000549686 PTF1AQ7RTS3 328 aa22.1■■□□□ 1.13
LETMD1-220ENST00000549686 GTF3C3Q9Y5Q9 886 aa22.1■■□□□ 1.13
LETMD1-220ENST00000549686 C20orf194Q5TEA3 1177 aa22.09■■□□□ 1.13
LETMD1-220ENST00000549686 CHMP4BQ9H444 224 aaKnown RBP22.09■■□□□ 1.13
LETMD1-220ENST00000549686 IRX6P78412 446 aaPredicted RBP22.08■■□□□ 1.13
LETMD1-220ENST00000549686 AAMPQ13685 434 aa22.08■■□□□ 1.13
LETMD1-220ENST00000549686 PROSER3Q2NL68 480 aa22.08■■□□□ 1.13
LETMD1-220ENST00000549686 A1BGP04217 495 aa22.07■■□□□ 1.12
LETMD1-220ENST00000549686 SLC27A3Q5K4L6 730 aa22.07■■□□□ 1.12
LETMD1-220ENST00000549686 LRP10Q7Z4F1 713 aa22.07■■□□□ 1.12
LETMD1-220ENST00000549686 PANK1Q8TE04 598 aa22.07■■□□□ 1.12
LETMD1-220ENST00000549686 CLUAP1Q96AJ1 413 aa22.07■■□□□ 1.12
LETMD1-220ENST00000549686 PHAXQ9H814 394 aaKnown RBP22.07■■□□□ 1.12
LETMD1-220ENST00000549686 NBPF26B4DH59 902 aa22.06■■□□□ 1.12
LETMD1-220ENST00000549686 ANXA1P04083 346 aa22.06■■□□□ 1.12
LETMD1-220ENST00000549686 MYL6BP14649 208 aa22.06■■□□□ 1.12
LETMD1-220ENST00000549686 ITPK1Q13572 414 aa22.06■■□□□ 1.12
LETMD1-220ENST00000549686 MVPQ14764 893 aaKnown RBP22.06■■□□□ 1.12
LETMD1-220ENST00000549686 NBPF14Q5TI25 921 aa22.06■■□□□ 1.12
LETMD1-220ENST00000549686 NBPF10Q6P3W6 841 aaKnown RBP22.06■■□□□ 1.12
LETMD1-220ENST00000549686 NBPF15Q8N660 670 aa22.06■■□□□ 1.12
LETMD1-220ENST00000549686 CCNL1Q9UK58 526 aaPredicted RBP22.06■■□□□ 1.12
LETMD1-220ENST00000549686 DDX19BQ9UMR2 479 aa22.06■■□□□ 1.12
LETMD1-220ENST00000549686 TJP1Q07157 1748 aa22.06■■□□□ 1.12
LETMD1-220ENST00000549686 PXDNLA1KZ92 1463 aa22.05■■□□□ 1.12
LETMD1-220ENST00000549686 RLBP1P12271 317 aa22.05■■□□□ 1.12
LETMD1-220ENST00000549686 IL6STP40189 918 aaPredicted RBP22.05■■□□□ 1.12
LETMD1-220ENST00000549686 CCT4P50991 539 aaKnown RBP22.05■■□□□ 1.12
LETMD1-220ENST00000549686 INTS3Q68E01 1043 aaKnown RBP22.05■■□□□ 1.12
LETMD1-220ENST00000549686 KSR2Q6VAB6 950 aa22.05■■□□□ 1.12
LETMD1-220ENST00000549686 CRBNQ96SW2 442 aa22.05■■□□□ 1.12
LETMD1-220ENST00000549686 CCDC87Q9NVE4 849 aa22.05■■□□□ 1.12
LETMD1-220ENST00000549686 CNTNAP4Q9C0A0 1308 aa22.05■■□□□ 1.12
LETMD1-220ENST00000549686 PLSCR1O15162 318 aa22.04■■□□□ 1.12
LETMD1-220ENST00000549686 RC3H1Q5TC82 1133 aaKnown RBP22.04■■□□□ 1.12
LETMD1-220ENST00000549686 NPM2Q86SE8 214 aaKnown RBP22.04■■□□□ 1.12
LETMD1-220ENST00000549686 TMEM57Q8N5G2 664 aa22.04■■□□□ 1.12
LETMD1-220ENST00000549686 XAGE3Q8WTP9 111 aa22.04■■□□□ 1.12
LETMD1-220ENST00000549686 TNNQ9UQP3 1299 aa22.04■■□□□ 1.12
LETMD1-220ENST00000549686 CRKLP46109 303 aaKnown RBP22.03■■□□□ 1.12
LETMD1-220ENST00000549686 COPS6Q7L5N1 327 aa22.03■■□□□ 1.12
LETMD1-220ENST00000549686 COG6Q9Y2V7 657 aa22.03■■□□□ 1.12
LETMD1-220ENST00000549686 INTS5Q6P9B9 1019 aaKnown RBP22.02■■□□□ 1.12
LETMD1-220ENST00000549686 ITPRIPQ8IWB1 547 aa22.02■■□□□ 1.12
LETMD1-220ENST00000549686 DNAAF4Q8WXU2 420 aa22.02■■□□□ 1.12
LETMD1-220ENST00000549686 LY75O60449 1722 aa22.01■■□□□ 1.11
LETMD1-220ENST00000549686 PI4KAP2A4QPH2 592 aa22.01■■□□□ 1.11
LETMD1-220ENST00000549686 AIMP1Q12904 312 aaKnown RBP22.01■■□□□ 1.11
LETMD1-220ENST00000549686 ANKRD13DQ6ZTN6 518 aa22.01■■□□□ 1.11
LETMD1-220ENST00000549686 PI4KAP1Q8N8J0 262 aa22.01■■□□□ 1.11
LETMD1-220ENST00000549686 PLBD2Q8NHP8 589 aa22.01■■□□□ 1.11
LETMD1-220ENST00000549686 EXOC6Q8TAG9 804 aa22.01■■□□□ 1.11
LETMD1-220ENST00000549686 ZBTB1Q9Y2K1 713 aa22.01■■□□□ 1.11
LETMD1-220ENST00000549686 ATP10DQ9P241 1426 aa22■■□□□ 1.11
LETMD1-220ENST00000549686 F6X3S4 739 aa22■■□□□ 1.11
LETMD1-220ENST00000549686 APBA3O96018 575 aa22■■□□□ 1.11
LETMD1-220ENST00000549686 RIC3Q7Z5B4 369 aa22■■□□□ 1.11
LETMD1-220ENST00000549686 LINC00116Q8NCU8 138 aa22■■□□□ 1.11
LETMD1-220ENST00000549686 ADCY9O60503 1353 aa21.99■■□□□ 1.11
LETMD1-220ENST00000549686 IBTKQ9P2D0 1353 aaPredicted RBP21.99■■□□□ 1.11
LETMD1-220ENST00000549686 PIP4K2AP48426 406 aaPredicted RBP21.99■■□□□ 1.11
LETMD1-220ENST00000549686 SLC4A10Q6U841 1118 aa21.99■■□□□ 1.11
LETMD1-220ENST00000549686 KIF6Q6ZMV9 814 aa21.99■■□□□ 1.11
LETMD1-220ENST00000549686 MAP3K2Q9Y2U5 619 aa21.99■■□□□ 1.11
LETMD1-220ENST00000549686 RREB1Q92766 1687 aa21.98■■□□□ 1.11
LETMD1-220ENST00000549686 A0A087WZG4 1122 aa21.98■■□□□ 1.11
LETMD1-220ENST00000549686 EIF5P55010 431 aaKnown RBP21.98■■□□□ 1.11
LETMD1-220ENST00000549686 NEXNQ0ZGT2 675 aa21.98■■□□□ 1.11
LETMD1-220ENST00000549686 PPP4R2Q9NY27 417 aa21.98■■□□□ 1.11
LETMD1-220ENST00000549686 ALDH1L1O75891 902 aa21.97■■□□□ 1.11
LETMD1-220ENST00000549686 SRCIN1Q9C0H9 1055 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms