RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 BTBD11A6QL63 1104 aa32.11■■■□□ 2.73
USP44-205ENST00000549639 ZBTB1Q9Y2K1 713 aa32.11■■■□□ 2.73
USP44-205ENST00000549639 FKBP8Q14318 412 aa32.1■■■□□ 2.73
USP44-205ENST00000549639 PNNQ9H307 717 aaKnown RBP32.1■■■□□ 2.73
USP44-205ENST00000549639 COL15A1P39059 1388 aa32.09■■■□□ 2.73
USP44-205ENST00000549639 NARFQ9UHQ1 456 aa32.09■■■□□ 2.73
USP44-205ENST00000549639 PXDNLA1KZ92 1463 aa32.06■■■□□ 2.72
USP44-205ENST00000549639 A0A087WZG4 1122 aa32.06■■■□□ 2.72
USP44-205ENST00000549639 USPL1Q5W0Q7 1092 aa32.06■■■□□ 2.72
USP44-205ENST00000549639 TM4SF1P30408 202 aa32.05■■■□□ 2.72
USP44-205ENST00000549639 CANXP27824 592 aaKnown RBP32.04■■■□□ 2.72
USP44-205ENST00000549639 EIF5P55010 431 aaKnown RBP32.04■■■□□ 2.72
USP44-205ENST00000549639 DDX10Q13206 875 aaKnown RBP32.04■■■□□ 2.72
USP44-205ENST00000549639 MCM10Q7L590 875 aa32.04■■■□□ 2.72
USP44-205ENST00000549639 DDR1Q08345 913 aa32.02■■■□□ 2.72
USP44-205ENST00000549639 POLRMTO00411 1230 aaKnown RBP32.01■■■□□ 2.71
USP44-205ENST00000549639 IL6STP40189 918 aaPredicted RBP32.01■■■□□ 2.71
USP44-205ENST00000549639 PLEKHF1Q96S99 279 aa32.01■■■□□ 2.71
USP44-205ENST00000549639 KIAA1551Q9HCM1 1747 aa32■■■□□ 2.71
USP44-205ENST00000549639 A0A0G2JLW4 131 aa31.99■■■□□ 2.71
USP44-205ENST00000549639 KCNQ3O43525 872 aa31.98■■■□□ 2.71
USP44-205ENST00000549639 TAF7Q15545 349 aaPredicted RBP31.98■■■□□ 2.71
USP44-205ENST00000549639 NPM2Q86SE8 214 aaKnown RBP31.98■■■□□ 2.71
USP44-205ENST00000549639 SNRPA1P09661 255 aaKnown RBP31.97■■■□□ 2.71
USP44-205ENST00000549639 DPEP1P16444 411 aa31.97■■■□□ 2.71
USP44-205ENST00000549639 DCTN1Q14203 1278 aa31.97■■■□□ 2.71
USP44-205ENST00000549639 MAPK8IP3Q9UPT6 1336 aa31.97■■■□□ 2.71
USP44-205ENST00000549639 N4BP2Q86UW6 1770 aaPredicted RBP31.96■■■□□ 2.71
USP44-205ENST00000549639 NFIXQ14938 502 aa31.96■■■□□ 2.71
USP44-205ENST00000549639 NFE2L2Q16236 605 aa31.96■■■□□ 2.71
USP44-205ENST00000549639 BCL2L12Q9HB09 334 aa31.96■■■□□ 2.71
USP44-205ENST00000549639 WWC3Q9ULE0 1092 aa31.96■■■□□ 2.71
USP44-205ENST00000549639 MYBBP1AQ9BQG0 1328 aaKnown RBP31.96■■■□□ 2.71
USP44-205ENST00000549639 PNISRQ8TF01 805 aaKnown RBP31.95■■■□□ 2.71
USP44-205ENST00000549639 BCS1LQ9Y276 419 aa31.94■■■□□ 2.7
USP44-205ENST00000549639 PIM2Q9P1W9 311 aa31.93■■■□□ 2.7
USP44-205ENST00000549639 A1BGP04217 495 aa31.92■■■□□ 2.7
USP44-205ENST00000549639 KCNA3P22001 575 aa31.91■■■□□ 2.7
USP44-205ENST00000549639 USP16Q9Y5T5 823 aa31.91■■■□□ 2.7
USP44-205ENST00000549639 DLG5Q8TDM6 1919 aa31.9■■■□□ 2.7
USP44-205ENST00000549639 SERPINB2P05120 415 aa31.9■■■□□ 2.7
USP44-205ENST00000549639 ZNF330Q9Y3S2 320 aaPredicted RBP31.9■■■□□ 2.7
USP44-205ENST00000549639 NRXN2Q9P2S2 1712 aa31.89■■■□□ 2.7
USP44-205ENST00000549639 BRCA1P38398 1863 aaKnown RBP31.89■■■□□ 2.7
USP44-205ENST00000549639 TBC1D2BQ9UPU7 963 aa31.88■■■□□ 2.69
USP44-205ENST00000549639 ADCY9O60503 1353 aa31.87■■■□□ 2.69
USP44-205ENST00000549639 SCN7AQ01118 1682 aa31.86■■■□□ 2.69
USP44-205ENST00000549639 DALRD3Q5D0E6 543 aaKnown RBP31.86■■■□□ 2.69
USP44-205ENST00000549639 AFDNP55196 1824 aaKnown RBP31.86■■■□□ 2.69
USP44-205ENST00000549639 ATP10DQ9P241 1426 aa31.85■■■□□ 2.69
USP44-205ENST00000549639 ZEB1P37275 1124 aaPredicted RBP31.84■■■□□ 2.69
USP44-205ENST00000549639 PRAMEF22A3QJZ6 481 aa31.83■■■□□ 2.69
USP44-205ENST00000549639 GIGYF1O75420 1035 aaPredicted RBP31.83■■■□□ 2.69
USP44-205ENST00000549639 CAMTA2O94983 1202 aa31.83■■■□□ 2.69
USP44-205ENST00000549639 TBC1D9BQ66K14 1250 aa31.83■■■□□ 2.69
USP44-205ENST00000549639 DZIP3Q86Y13 1208 aaKnown RBP31.83■■■□□ 2.69
USP44-205ENST00000549639 ARFGEF1Q9Y6D6 1849 aa31.83■■■□□ 2.69
USP44-205ENST00000549639 RGL2O15211 777 aa31.82■■■□□ 2.68
USP44-205ENST00000549639 BICDL1Q6ZP65 573 aa31.82■■■□□ 2.68
USP44-205ENST00000549639 ARHGAP27Q6ZUM4 889 aa31.82■■■□□ 2.68
USP44-205ENST00000549639 MIS18AQ9NYP9 233 aa31.82■■■□□ 2.68
USP44-205ENST00000549639 CARMIL3Q8ND23 1372 aa31.81■■■□□ 2.68
USP44-205ENST00000549639 CHRNA5P30532 468 aa31.81■■■□□ 2.68
USP44-205ENST00000549639 LMOD3Q0VAK6 560 aa31.81■■■□□ 2.68
USP44-205ENST00000549639 CLEC4GQ6UXB4 293 aa31.81■■■□□ 2.68
USP44-205ENST00000549639 PDZRN3Q9UPQ7 1066 aa31.81■■■□□ 2.68
USP44-205ENST00000549639 KDM3BQ7LBC6 1761 aa31.81■■■□□ 2.68
USP44-205ENST00000549639 SETDB2Q96T68 719 aa31.8■■■□□ 2.68
USP44-205ENST00000549639 RIPK4P57078 832 aa31.79■■■□□ 2.68
USP44-205ENST00000549639 ZNF652Q9Y2D9 606 aa31.79■■■□□ 2.68
USP44-205ENST00000549639 C1QTNF8P60827 252 aa31.78■■■□□ 2.68
USP44-205ENST00000549639 PRKRIP1Q9H875 184 aaPredicted RBP31.78■■■□□ 2.68
USP44-205ENST00000549639 GPBP1L1Q9HC44 474 aaPredicted RBP31.78■■■□□ 2.68
USP44-205ENST00000549639 EIF4A1P60842 406 aaKnown RBP31.77■■■□□ 2.68
USP44-205ENST00000549639 WDR43Q15061 677 aaKnown RBP eCLIP31.77■■■□□ 2.68
USP44-205ENST00000549639 THUMPD2Q9BTF0 503 aaKnown RBP31.77■■■□□ 2.68
USP44-205ENST00000549639 BABAM1Q9NWV8 329 aa31.77■■■□□ 2.68
USP44-205ENST00000549639 LAMB4A4D0S4 1761 aa31.76■■■□□ 2.68
USP44-205ENST00000549639 BCORQ6W2J9 1755 aa31.76■■■□□ 2.68
USP44-205ENST00000549639 NBPF26B4DH59 902 aa31.76■■■□□ 2.67
USP44-205ENST00000549639 H0YIN7 160 aa31.76■■■□□ 2.67
USP44-205ENST00000549639 TMPOP42166 694 aaKnown RBP31.76■■■□□ 2.67
USP44-205ENST00000549639 NBPF10Q6P3W6 841 aaKnown RBP31.76■■■□□ 2.67
USP44-205ENST00000549639 NBPF15Q8N660 670 aa31.76■■■□□ 2.67
USP44-205ENST00000549639 BRIP1Q9BX63 1249 aa31.76■■■□□ 2.67
USP44-205ENST00000549639 PIP4K2AP48426 406 aaPredicted RBP31.75■■■□□ 2.67
USP44-205ENST00000549639 PDE6BP35913 854 aa31.74■■■□□ 2.67
USP44-205ENST00000549639 PRR5LQ6MZQ0 368 aa31.73■■■□□ 2.67
USP44-205ENST00000549639 C2CD5Q86YS7 1000 aa31.73■■■□□ 2.67
USP44-205ENST00000549639 DLEC1Q9Y238 1755 aa31.72■■■□□ 2.67
USP44-205ENST00000549639 TTLL6Q8N841 843 aa31.72■■■□□ 2.67
USP44-205ENST00000549639 CNBD1Q8NA66 436 aa31.72■■■□□ 2.67
USP44-205ENST00000549639 RUNDC1Q96C34 613 aa31.72■■■□□ 2.67
USP44-205ENST00000549639 TSPYL4Q9UJ04 414 aa31.71■■■□□ 2.67
USP44-205ENST00000549639 NPHP1O15259 732 aa31.7■■■□□ 2.67
USP44-205ENST00000549639 ST5P78524 1137 aa31.7■■■□□ 2.67
USP44-205ENST00000549639 ERBB4Q15303 1308 aa31.68■■■□□ 2.66
USP44-205ENST00000549639 CCDC146Q8IYE0 955 aa31.66■■■□□ 2.66
USP44-205ENST00000549639 ZNF526Q8TF50 670 aaPredicted RBP31.66■■■□□ 2.66
USP44-205ENST00000549639 ADAMTS8Q9UP79 889 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms