RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ROBO1Q9Y6N7 1651 aa12.44□□□□□ -0.42
RAB5B-206ENST00000549505 USP42Q9H9J4 1324 aaKnown RBP12.44□□□□□ -0.42
RAB5B-206ENST00000549505 EPB41L2O43491 1005 aaKnown RBP12.44□□□□□ -0.42
RAB5B-206ENST00000549505 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
RAB5B-206ENST00000549505 SNX21Q969T3 373 aa12.44□□□□□ -0.42
RAB5B-206ENST00000549505 LNPKQ9C0E8 428 aa12.44□□□□□ -0.42
RAB5B-206ENST00000549505 KCNQ3O43525 872 aa12.43□□□□□ -0.42
RAB5B-206ENST00000549505 ARFGEF2Q9Y6D5 1785 aa12.43□□□□□ -0.42
RAB5B-206ENST00000549505 RAB11FIP3O75154 756 aa12.43□□□□□ -0.42
RAB5B-206ENST00000549505 ZNF790Q6PG37 636 aa12.43□□□□□ -0.42
RAB5B-206ENST00000549505 ERVV-2B6SEH9 535 aa12.42□□□□□ -0.42
RAB5B-206ENST00000549505 CYP27B1O15528 508 aa12.42□□□□□ -0.42
RAB5B-206ENST00000549505 GSPT1P15170 499 aaKnown RBP12.42□□□□□ -0.42
RAB5B-206ENST00000549505 ZC3H6P61129 1189 aaKnown RBP12.42□□□□□ -0.42
RAB5B-206ENST00000549505 FKBP5Q13451 457 aaPredicted RBP12.42□□□□□ -0.42
RAB5B-206ENST00000549505 DNAAF4Q8WXU2 420 aa12.42□□□□□ -0.42
RAB5B-206ENST00000549505 HDAC5Q9UQL6 1122 aa12.42□□□□□ -0.42
RAB5B-206ENST00000549505 F6X3S4 739 aa12.42□□□□□ -0.42
RAB5B-206ENST00000549505 KSR2Q6VAB6 950 aa12.42□□□□□ -0.42
RAB5B-206ENST00000549505 DDX17Q92841 729 aaKnown RBP12.42□□□□□ -0.42
RAB5B-206ENST00000549505 CHPF2Q9P2E5 772 aa12.42□□□□□ -0.42
RAB5B-206ENST00000549505 PCDH11XQ9BZA7 1347 aa12.42□□□□□ -0.42
RAB5B-206ENST00000549505 PCDH11YQ9BZA8 1340 aa12.42□□□□□ -0.42
RAB5B-206ENST00000549505 SRCIN1Q9C0H9 1055 aa12.42□□□□□ -0.42
RAB5B-206ENST00000549505 PHAXQ9H814 394 aaKnown RBP12.41□□□□□ -0.42
RAB5B-206ENST00000549505 CDC45O75419 566 aa12.4□□□□□ -0.42
RAB5B-206ENST00000549505 C22orf23Q9BZE7 217 aa12.4□□□□□ -0.42
RAB5B-206ENST00000549505 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.42
RAB5B-206ENST00000549505 ZNF831Q5JPB2 1677 aa12.4□□□□□ -0.42
RAB5B-206ENST00000549505 RREB1Q92766 1687 aa12.4□□□□□ -0.42
RAB5B-206ENST00000549505 ANTXR1Q9H6X2 564 aa12.4□□□□□ -0.43
RAB5B-206ENST00000549505 BECN1Q14457 450 aa12.39□□□□□ -0.43
RAB5B-206ENST00000549505 NLRP2Q9NX02 1062 aa12.39□□□□□ -0.43
RAB5B-206ENST00000549505 TBC1D9Q6ZT07 1266 aa12.39□□□□□ -0.43
RAB5B-206ENST00000549505 TJP1Q07157 1748 aa12.39□□□□□ -0.43
RAB5B-206ENST00000549505 DEKP35659 375 aaKnown RBP12.38□□□□□ -0.43
RAB5B-206ENST00000549505 NPM2Q86SE8 214 aaKnown RBP12.38□□□□□ -0.43
RAB5B-206ENST00000549505 LINS1Q8NG48 757 aa12.38□□□□□ -0.43
RAB5B-206ENST00000549505 KIF2CQ99661 725 aa12.38□□□□□ -0.43
RAB5B-206ENST00000549505 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
RAB5B-206ENST00000549505 UBTFL1P0CB47 393 aaPredicted RBP12.37□□□□□ -0.43
RAB5B-206ENST00000549505 DDIT3P35638 169 aa12.37□□□□□ -0.43
RAB5B-206ENST00000549505 PNMA6EA0A0J9YXQ4 647 aa12.37□□□□□ -0.43
RAB5B-206ENST00000549505 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
RAB5B-206ENST00000549505 PI4KAP2A4QPH2 592 aa12.37□□□□□ -0.43
RAB5B-206ENST00000549505 PDE1AP54750 535 aa12.37□□□□□ -0.43
RAB5B-206ENST00000549505 PI4KAP1Q8N8J0 262 aa12.37□□□□□ -0.43
RAB5B-206ENST00000549505 CABLES1Q8TDN4 633 aa12.37□□□□□ -0.43
RAB5B-206ENST00000549505 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
RAB5B-206ENST00000549505 HSP90AB4PQ58FF6 505 aa12.36□□□□□ -0.43
RAB5B-206ENST00000549505 LRRFIP2Q9Y608 721 aaKnown RBP12.36□□□□□ -0.43
RAB5B-206ENST00000549505 DDX58O95786 925 aaKnown RBP12.36□□□□□ -0.43
RAB5B-206ENST00000549505 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
RAB5B-206ENST00000549505 FMNL2Q96PY5 1086 aa12.36□□□□□ -0.43
RAB5B-206ENST00000549505 SLC4A10Q6U841 1118 aa12.35□□□□□ -0.43
RAB5B-206ENST00000549505 IL2RBP14784 551 aa12.35□□□□□ -0.43
RAB5B-206ENST00000549505 NBR1Q14596 966 aa12.35□□□□□ -0.43
RAB5B-206ENST00000549505 TBC1D2Q9BYX2 928 aa12.35□□□□□ -0.43
RAB5B-206ENST00000549505 ITGB4P16144 1822 aa12.35□□□□□ -0.43
RAB5B-206ENST00000549505 PROSER3Q2NL68 480 aa12.35□□□□□ -0.43
RAB5B-206ENST00000549505 CHRNA2Q15822 529 aa12.34□□□□□ -0.43
RAB5B-206ENST00000549505 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
RAB5B-206ENST00000549505 VSIG10Q8N0Z9 540 aa12.34□□□□□ -0.43
RAB5B-206ENST00000549505 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
RAB5B-206ENST00000549505 METTL22Q9BUU2 404 aaPredicted RBP12.34□□□□□ -0.43
RAB5B-206ENST00000549505 PRDM11Q9NQV5 511 aa12.34□□□□□ -0.43
RAB5B-206ENST00000549505 AFDNP55196 1824 aaKnown RBP12.34□□□□□ -0.43
RAB5B-206ENST00000549505 SDSP20132 328 aa12.34□□□□□ -0.43
RAB5B-206ENST00000549505 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.33□□□□□ -0.43
RAB5B-206ENST00000549505 ZNF496Q96IT1 587 aaPredicted RBP12.33□□□□□ -0.44
RAB5B-206ENST00000549505 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
RAB5B-206ENST00000549505 PHLPP1O60346 1717 aa12.33□□□□□ -0.44
RAB5B-206ENST00000549505 C16orf71Q8IYS4 520 aaPredicted RBP12.33□□□□□ -0.44
RAB5B-206ENST00000549505 ZBTB7CA1YPR0 619 aa12.33□□□□□ -0.44
RAB5B-206ENST00000549505 NBPF7P0C2Y1 421 aaPredicted RBP12.33□□□□□ -0.44
RAB5B-206ENST00000549505 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
RAB5B-206ENST00000549505 TICAM2Q86XR7 235 aa12.33□□□□□ -0.44
RAB5B-206ENST00000549505 KIF1BPQ96EK5 621 aa12.33□□□□□ -0.44
RAB5B-206ENST00000549505 USP26Q9BXU7 913 aa12.33□□□□□ -0.44
RAB5B-206ENST00000549505 TTC41PQ6P2S7 1318 aa12.32□□□□□ -0.44
RAB5B-206ENST00000549505 IGKV5-2P06315 115 aa12.32□□□□□ -0.44
RAB5B-206ENST00000549505 PPP1R42Q7Z4L9 355 aa12.32□□□□□ -0.44
RAB5B-206ENST00000549505 KAZALD1Q96I82 304 aa12.32□□□□□ -0.44
RAB5B-206ENST00000549505 CSB-PGBD3P0DP91 1061 aa12.32□□□□□ -0.44
RAB5B-206ENST00000549505 EIF2S2P20042 333 aaKnown RBP12.32□□□□□ -0.44
RAB5B-206ENST00000549505 CASP7P55210 303 aa12.32□□□□□ -0.44
RAB5B-206ENST00000549505 PRAMEF22A3QJZ6 481 aa12.31□□□□□ -0.44
RAB5B-206ENST00000549505 MX1P20591 662 aa12.31□□□□□ -0.44
RAB5B-206ENST00000549505 ERC1Q8IUD2 1116 aa12.31□□□□□ -0.44
RAB5B-206ENST00000549505 OTUD7AQ8TE49 926 aaPredicted RBP12.31□□□□□ -0.44
RAB5B-206ENST00000549505 NEURL1BA8MQ27 555 aa12.31□□□□□ -0.44
RAB5B-206ENST00000549505 GRM8O00222 908 aa12.31□□□□□ -0.44
RAB5B-206ENST00000549505 CABP4P57796 275 aa12.31□□□□□ -0.44
RAB5B-206ENST00000549505 PLBD2Q8NHP8 589 aa12.31□□□□□ -0.44
RAB5B-206ENST00000549505 SNRKQ9NRH2 765 aa12.31□□□□□ -0.44
RAB5B-206ENST00000549505 MFAP1P55081 439 aaKnown RBP12.3□□□□□ -0.44
RAB5B-206ENST00000549505 PI4K2BQ8TCG2 481 aa12.3□□□□□ -0.44
RAB5B-206ENST00000549505 RHPN1Q8TCX5 695 aa12.3□□□□□ -0.44
RAB5B-206ENST00000549505 ANKRD36CQ5JPF3 1778 aa12.3□□□□□ -0.44
RAB5B-206ENST00000549505 NECTIN2Q92692 538 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms