RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 HMGN5P82970 282 aaKnown RBP10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 NBPF14Q5TI25 921 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 SSH1Q8WYL5 1049 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 ADAMTS2O95450 1211 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 RFC4P35249 363 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 KRT85P78386 507 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 HSP90AA2PQ14568 343 aaPredicted RBP10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 STK38Q15208 465 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 MPHOSPH6Q99547 160 aaKnown RBP10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 MYO6Q9UM54 1294 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 TET3O43151 1660 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 FAM177BA6PVY3 158 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 PDRG1Q9NUG6 133 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 CLASP1Q7Z460 1538 aa10.91□□□□□ -0.66
PPFIA2-216ENST00000549396 DZIP1Q86YF9 867 aaKnown RBP10.9□□□□□ -0.66
PPFIA2-216ENST00000549396 GZF1Q9H116 711 aaPredicted RBP10.9□□□□□ -0.66
PPFIA2-216ENST00000549396 FAM135BQ49AJ0 1406 aa10.9□□□□□ -0.66
PPFIA2-216ENST00000549396 ATP7BP35670 1465 aa10.9□□□□□ -0.66
PPFIA2-216ENST00000549396 TRIM21P19474 475 aaKnown RBP10.9□□□□□ -0.66
PPFIA2-216ENST00000549396 MPRIPQ6WCQ1 1025 aa10.9□□□□□ -0.66
PPFIA2-216ENST00000549396 CDR1P51861 262 aa10.9□□□□□ -0.66
PPFIA2-216ENST00000549396 CREBRFQ8IUR6 639 aa10.9□□□□□ -0.66
PPFIA2-216ENST00000549396 SDF4Q9BRK5 362 aa10.9□□□□□ -0.66
PPFIA2-216ENST00000549396 A0A1W2PP64 1363 aa10.9□□□□□ -0.67
PPFIA2-216ENST00000549396 RBM5P52756 815 aaKnown RBP eCLIP10.9□□□□□ -0.67
PPFIA2-216ENST00000549396 FKBP4Q02790 459 aaKnown RBP eCLIP10.9□□□□□ -0.67
PPFIA2-216ENST00000549396 HDAC1Q13547 482 aaPredicted RBP10.9□□□□□ -0.67
PPFIA2-216ENST00000549396 GSE1Q14687 1217 aa10.9□□□□□ -0.67
PPFIA2-216ENST00000549396 ECHDC1Q9NTX5 307 aa10.9□□□□□ -0.67
PPFIA2-216ENST00000549396 PARP10Q53GL7 1025 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 IQCA1Q86XH1 822 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 ANKRD2Q9GZV1 360 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 CBFA2T2O43439 604 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 KSR2Q6VAB6 950 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 ANKRD13DQ6ZTN6 518 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 RAB34Q9BZG1 259 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 SEC63Q9UGP8 760 aaKnown RBP10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 HDAC9Q9UKV0 1011 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 NPHP4O75161 1426 aaPredicted RBP10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 KIF20AO95235 890 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 USP5P45974 858 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 TESK2Q96S53 571 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 SIL1Q9H173 461 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 ACBD3Q9H3P7 528 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 MBIPQ9NS73 344 aa10.89□□□□□ -0.67
PPFIA2-216ENST00000549396 GCP02774 474 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 HLA-DOAP06340 250 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 PLCG2P16885 1265 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 CCDC173Q0VFZ6 552 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 ANKIB1Q9P2G1 1089 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 NCKAP5LQ9HCH0 1330 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 IL15P40933 162 aaPredicted RBP10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 EIF4A2Q14240 407 aaKnown RBP10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 PTPRTO14522 1441 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 PTCD1O75127 700 aaKnown RBP10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 EYA3Q99504 573 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 TTC37Q6PGP7 1564 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 MYO1BO43795 1136 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 KIF5BP33176 963 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 MRE11P49959 708 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 RRP12Q5JTH9 1297 aaKnown RBP10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 NAPBQ9H115 298 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 CCDC39Q9UFE4 941 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 MAP3K2Q9Y2U5 619 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 ERVK-7P63135 1459 aa10.88□□□□□ -0.67
PPFIA2-216ENST00000549396 SMC2O95347 1197 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 TMTC2Q8N394 836 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 UGGT1Q9NYU2 1555 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 KIF1BO60333 1816 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 GNAT2P19087 354 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 HOXC9P31274 260 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 POLKQ9UBT6 870 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 POLR3DP05423 398 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 ANKARQ7Z5J8 1434 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 SYNMO15061 1565 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 KRT18P05783 430 aaKnown RBP10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 POLD1P28340 1107 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 PDE4BQ07343 736 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 CRACR2BQ8N4Y2 399 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 LINS1Q8NG48 757 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 CTCFLQ8NI51 663 aaPredicted RBP10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 SETDB2Q96T68 719 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 GTPBP4Q9BZE4 634 aaKnown RBP10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 ERBB4Q15303 1308 aa10.87□□□□□ -0.67
PPFIA2-216ENST00000549396 CUL5Q93034 780 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 C1orf115Q9H7X2 142 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 IDH1O75874 414 aaKnown RBP10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 DESP17661 470 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 BMP2KLQ5H9B9 411 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 ANKRD18AQ8IVF6 992 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 ZSCAN29Q8IWY8 852 aaPredicted RBP10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 UTP14AQ9BVJ6 771 aaKnown RBP10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 LRRC27Q9C0I9 530 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 CNNM2Q9H8M5 875 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 TTC41PQ6P2S7 1318 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 YEATS2Q9ULM3 1422 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 NLRP3Q96P20 1036 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 BACH2Q9BYV9 841 aa10.86□□□□□ -0.67
PPFIA2-216ENST00000549396 AATKQ6ZMQ8 1374 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms