RNA–Protein interactions for RNA: ENST00000549324.1

RPH3A-214, Transcript of rabphilin 3A, humanhuman

TSL 4

Gene RPH3A, Length 2,349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-214ENST00000549324 ST7Q9NRC1 585 aa13.78□□□□□ -0.2
RPH3A-214ENST00000549324 RPAP1Q9BWH6 1393 aaPredicted RBP13.78□□□□□ -0.2
RPH3A-214ENST00000549324 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
RPH3A-214ENST00000549324 SECISBP2LQ93073 1101 aaKnown RBP13.78□□□□□ -0.2
RPH3A-214ENST00000549324 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
RPH3A-214ENST00000549324 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.77□□□□□ -0.2
RPH3A-214ENST00000549324 SLFNL1Q499Z3 407 aa13.77□□□□□ -0.21
RPH3A-214ENST00000549324 FBXO38Q6PIJ6 1188 aa13.77□□□□□ -0.21
RPH3A-214ENST00000549324 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.21
RPH3A-214ENST00000549324 PUS7Q96PZ0 661 aaKnown RBP13.77□□□□□ -0.21
RPH3A-214ENST00000549324 DCTPP1Q9H773 170 aa13.77□□□□□ -0.21
RPH3A-214ENST00000549324 NPHP4O75161 1426 aaPredicted RBP13.77□□□□□ -0.21
RPH3A-214ENST00000549324 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
RPH3A-214ENST00000549324 GIMAP6Q6P9H5 292 aa13.76□□□□□ -0.21
RPH3A-214ENST00000549324 AMOTL2Q9Y2J4 779 aa13.76□□□□□ -0.21
RPH3A-214ENST00000549324 SRCIN1Q9C0H9 1055 aa13.76□□□□□ -0.21
RPH3A-214ENST00000549324 SLC12A5Q9H2X9 1139 aa13.76□□□□□ -0.21
RPH3A-214ENST00000549324 CNPY2Q9Y2B0 182 aa13.76□□□□□ -0.21
RPH3A-214ENST00000549324 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.76□□□□□ -0.21
RPH3A-214ENST00000549324 RTL1A6NKG5 1358 aa13.76□□□□□ -0.21
RPH3A-214ENST00000549324 CHD2O14647 1828 aaKnown RBP13.75□□□□□ -0.21
RPH3A-214ENST00000549324 SRPK2P78362 688 aaKnown RBP13.75□□□□□ -0.21
RPH3A-214ENST00000549324 LRMPQ12912 555 aa13.75□□□□□ -0.21
RPH3A-214ENST00000549324 CCDC186Q7Z3E2 898 aa13.75□□□□□ -0.21
RPH3A-214ENST00000549324 ABCC4O15439 1325 aa13.75□□□□□ -0.21
RPH3A-214ENST00000549324 NCKAP5LQ9HCH0 1330 aa13.75□□□□□ -0.21
RPH3A-214ENST00000549324 TNNT3P45378 269 aaPredicted RBP13.75□□□□□ -0.21
RPH3A-214ENST00000549324 CEP135Q66GS9 1140 aa13.75□□□□□ -0.21
RPH3A-214ENST00000549324 GEMIN8Q9NWZ8 242 aaKnown RBP13.75□□□□□ -0.21
RPH3A-214ENST00000549324 ZNF215Q9UL58 517 aaPredicted RBP13.75□□□□□ -0.21
RPH3A-214ENST00000549324 ATAD2Q6PL18 1390 aa13.74□□□□□ -0.21
RPH3A-214ENST00000549324 TPD52L1Q16890 204 aaPredicted RBP13.74□□□□□ -0.21
RPH3A-214ENST00000549324 OTUD7AQ8TE49 926 aaPredicted RBP13.74□□□□□ -0.21
RPH3A-214ENST00000549324 CDK19Q9BWU1 502 aa13.74□□□□□ -0.21
RPH3A-214ENST00000549324 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.74□□□□□ -0.21
RPH3A-214ENST00000549324 LMTK3Q96Q04 1460 aa13.74□□□□□ -0.21
RPH3A-214ENST00000549324 ZSCAN25Q6NSZ9 544 aa13.74□□□□□ -0.21
RPH3A-214ENST00000549324 ZNF446Q9NWS9 450 aa13.74□□□□□ -0.21
RPH3A-214ENST00000549324 RGS12O14924 1447 aa13.73□□□□□ -0.21
RPH3A-214ENST00000549324 CCDC192P0DO97 292 aa13.73□□□□□ -0.21
RPH3A-214ENST00000549324 NOL8Q76FK4 1167 aaKnown RBP13.73□□□□□ -0.21
RPH3A-214ENST00000549324 MRPL50Q8N5N7 158 aaKnown RBP13.73□□□□□ -0.21
RPH3A-214ENST00000549324 KCNA6P17658 529 aa13.73□□□□□ -0.21
RPH3A-214ENST00000549324 ELF2Q15723 593 aa13.73□□□□□ -0.21
RPH3A-214ENST00000549324 TPRNQ4KMQ1 711 aa13.73□□□□□ -0.21
RPH3A-214ENST00000549324 ERO1AQ96HE7 468 aa13.73□□□□□ -0.21
RPH3A-214ENST00000549324 RSPH14Q9UHP6 348 aa13.73□□□□□ -0.21
RPH3A-214ENST00000549324 HSPA2P54652 639 aa13.72□□□□□ -0.21
RPH3A-214ENST00000549324 BMS1Q14692 1282 aaKnown RBP13.72□□□□□ -0.21
RPH3A-214ENST00000549324 FAM200AQ8TCP9 573 aa13.72□□□□□ -0.21
RPH3A-214ENST00000549324 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
RPH3A-214ENST00000549324 ZNF592Q92610 1267 aa13.72□□□□□ -0.21
RPH3A-214ENST00000549324 ZBTB9Q96C00 473 aa13.72□□□□□ -0.21
RPH3A-214ENST00000549324 RASSF4Q9H2L5 321 aa13.72□□□□□ -0.21
RPH3A-214ENST00000549324 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.72□□□□□ -0.21
RPH3A-214ENST00000549324 V9GYY5 206 aaPredicted RBP13.72□□□□□ -0.21
RPH3A-214ENST00000549324 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.72□□□□□ -0.21
RPH3A-214ENST00000549324 WASLO00401 505 aaPredicted RBP13.72□□□□□ -0.21
RPH3A-214ENST00000549324 MUM1L1Q5H9M0 696 aa13.72□□□□□ -0.21
RPH3A-214ENST00000549324 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.21
RPH3A-214ENST00000549324 NSD2O96028 1365 aa13.71□□□□□ -0.21
RPH3A-214ENST00000549324 CD163L1Q9NR16 1453 aa13.71□□□□□ -0.21
RPH3A-214ENST00000549324 NOP2P46087 812 aaKnown RBP13.7□□□□□ -0.22
RPH3A-214ENST00000549324 ANAPC15P60006 121 aa13.7□□□□□ -0.22
RPH3A-214ENST00000549324 DRC7Q8IY82 874 aa13.7□□□□□ -0.22
RPH3A-214ENST00000549324 ERBB3P21860 1342 aa13.7□□□□□ -0.22
RPH3A-214ENST00000549324 CCDC171Q6TFL3 1326 aa13.7□□□□□ -0.22
RPH3A-214ENST00000549324 ZSCAN22P10073 491 aaPredicted RBP13.7□□□□□ -0.22
RPH3A-214ENST00000549324 MCCP23508 829 aa13.7□□□□□ -0.22
RPH3A-214ENST00000549324 MMP14P50281 582 aa13.7□□□□□ -0.22
RPH3A-214ENST00000549324 RNF20Q5VTR2 975 aa13.7□□□□□ -0.22
RPH3A-214ENST00000549324 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.7□□□□□ -0.22
RPH3A-214ENST00000549324 COL3A1P02461 1466 aaPredicted RBP13.69□□□□□ -0.22
RPH3A-214ENST00000549324 ATP7BP35670 1465 aa13.69□□□□□ -0.22
RPH3A-214ENST00000549324 A0A1W2PP64 1363 aa13.69□□□□□ -0.22
RPH3A-214ENST00000549324 FIBPO43427 364 aa13.69□□□□□ -0.22
RPH3A-214ENST00000549324 PALD1Q9ULE6 856 aa13.69□□□□□ -0.22
RPH3A-214ENST00000549324 FHOD1Q9Y613 1164 aa13.69□□□□□ -0.22
RPH3A-214ENST00000549324 SOX12O15370 315 aa13.69□□□□□ -0.22
RPH3A-214ENST00000549324 VAMP4O75379 141 aa13.69□□□□□ -0.22
RPH3A-214ENST00000549324 PLA2G4DQ86XP0 818 aa13.69□□□□□ -0.22
RPH3A-214ENST00000549324 TXLNBQ8N3L3 684 aa13.69□□□□□ -0.22
RPH3A-214ENST00000549324 GTF3C6Q969F1 213 aa13.69□□□□□ -0.22
RPH3A-214ENST00000549324 KIF24Q5T7B8 1368 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 PTPRCP08575 1304 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 H2AFXP16104 143 aaPredicted RBP13.68□□□□□ -0.22
RPH3A-214ENST00000549324 NYAP1Q6ZVC0 841 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 LUZP1Q86V48 1076 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 NWD1Q149M9 1564 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
RPH3A-214ENST00000549324 DHX16O60231 1041 aaKnown RBP13.68□□□□□ -0.22
RPH3A-214ENST00000549324 SLU7O95391 586 aaKnown RBP13.68□□□□□ -0.22
RPH3A-214ENST00000549324 ZNF75DP51815 510 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 TEX35Q5T0J7 233 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 CTR9Q6PD62 1173 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 NFATC2IPQ8NCF5 419 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 CACTINQ8WUQ7 758 aaKnown RBP13.68□□□□□ -0.22
RPH3A-214ENST00000549324 ATP6V1DQ9Y5K8 247 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 NALCNQ8IZF0 1738 aa13.68□□□□□ -0.22
RPH3A-214ENST00000549324 ATP10DQ9P241 1426 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms