RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 RGS12O14924 1447 aa15.32■□□□□ 0.04
PTPRR-209ENST00000549308 PTCD1O75127 700 aaKnown RBP15.32■□□□□ 0.04
PTPRR-209ENST00000549308 ACSBG1Q96GR2 724 aa15.32■□□□□ 0.04
PTPRR-209ENST00000549308 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
PTPRR-209ENST00000549308 QTRT2Q9H974 415 aaKnown RBP15.32■□□□□ 0.04
PTPRR-209ENST00000549308 ANXA1P04083 346 aa15.31■□□□□ 0.04
PTPRR-209ENST00000549308 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
PTPRR-209ENST00000549308 CHMP4BQ9H444 224 aaKnown RBP15.3■□□□□ 0.04
PTPRR-209ENST00000549308 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
PTPRR-209ENST00000549308 ASAP1Q9ULH1 1129 aa15.3■□□□□ 0.04
PTPRR-209ENST00000549308 INTS3Q68E01 1043 aaKnown RBP15.29■□□□□ 0.04
PTPRR-209ENST00000549308 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
PTPRR-209ENST00000549308 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
PTPRR-209ENST00000549308 HYPKQ9NX55 129 aa15.29■□□□□ 0.04
PTPRR-209ENST00000549308 KAT6BQ8WYB5 2073 aa15.29■□□□□ 0.04
PTPRR-209ENST00000549308 F6X3S4 739 aa15.28■□□□□ 0.04
PTPRR-209ENST00000549308 PROSER3Q2NL68 480 aa15.28■□□□□ 0.04
PTPRR-209ENST00000549308 FBXO41Q8TF61 875 aa15.28■□□□□ 0.04
PTPRR-209ENST00000549308 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
PTPRR-209ENST00000549308 MYL6BP14649 208 aa15.27■□□□□ 0.03
PTPRR-209ENST00000549308 CCT4P50991 539 aaKnown RBP15.27■□□□□ 0.03
PTPRR-209ENST00000549308 PELP1Q8IZL8 1130 aaKnown RBP15.27■□□□□ 0.03
PTPRR-209ENST00000549308 ONECUT3O60422 494 aaPredicted RBP15.26■□□□□ 0.03
PTPRR-209ENST00000549308 PDIA6Q15084 440 aa15.26■□□□□ 0.03
PTPRR-209ENST00000549308 ZNF772Q68DY9 489 aaPredicted RBP15.26■□□□□ 0.03
PTPRR-209ENST00000549308 SEPT12Q8IYM1 358 aa15.26■□□□□ 0.03
PTPRR-209ENST00000549308 VSIG10Q8N0Z9 540 aa15.26■□□□□ 0.03
PTPRR-209ENST00000549308 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
PTPRR-209ENST00000549308 PXDNLA1KZ92 1463 aa15.25■□□□□ 0.03
PTPRR-209ENST00000549308 ZBTB7BO15156 539 aaPredicted RBP15.25■□□□□ 0.03
PTPRR-209ENST00000549308 TEX13AQ9BXU3 409 aaPredicted RBP15.25■□□□□ 0.03
PTPRR-209ENST00000549308 ZBTB40Q9NUA8 1239 aa15.25■□□□□ 0.03
PTPRR-209ENST00000549308 DDX58O95786 925 aaKnown RBP15.25■□□□□ 0.03
PTPRR-209ENST00000549308 AIMP1Q12904 312 aaKnown RBP15.25■□□□□ 0.03
PTPRR-209ENST00000549308 PCDHB15Q9Y5E8 787 aa15.25■□□□□ 0.03
PTPRR-209ENST00000549308 PI4KAP2A4QPH2 592 aa15.24■□□□□ 0.03
PTPRR-209ENST00000549308 PIP4K2AP48426 406 aaPredicted RBP15.24■□□□□ 0.03
PTPRR-209ENST00000549308 CENPQQ7L2Z9 268 aaPredicted RBP15.24■□□□□ 0.03
PTPRR-209ENST00000549308 DNAJC10Q8IXB1 793 aa15.24■□□□□ 0.03
PTPRR-209ENST00000549308 PI4KAP1Q8N8J0 262 aa15.24■□□□□ 0.03
PTPRR-209ENST00000549308 XAGE3Q8WTP9 111 aa15.24■□□□□ 0.03
PTPRR-209ENST00000549308 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
PTPRR-209ENST00000549308 N4BP2Q86UW6 1770 aaPredicted RBP15.23■□□□□ 0.03
PTPRR-209ENST00000549308 KCNQ2O43526 872 aa15.23■□□□□ 0.03
PTPRR-209ENST00000549308 A1BGP04217 495 aa15.23■□□□□ 0.03
PTPRR-209ENST00000549308 SMARCC1Q92922 1105 aaPredicted RBP15.23■□□□□ 0.03
PTPRR-209ENST00000549308 KSR2Q6VAB6 950 aa15.22■□□□□ 0.03
PTPRR-209ENST00000549308 COPS6Q7L5N1 327 aa15.22■□□□□ 0.03
PTPRR-209ENST00000549308 RWDD1Q9H446 243 aaPredicted RBP15.22■□□□□ 0.03
PTPRR-209ENST00000549308 ADCY9O60503 1353 aa15.22■□□□□ 0.03
PTPRR-209ENST00000549308 STARD3NLO95772 234 aa15.21■□□□□ 0.03
PTPRR-209ENST00000549308 FAM182BQ5T319 152 aa15.21■□□□□ 0.03
PTPRR-209ENST00000549308 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
PTPRR-209ENST00000549308 SRCIN1Q9C0H9 1055 aa15.21■□□□□ 0.03
PTPRR-209ENST00000549308 C1orf115Q9H7X2 142 aa15.21■□□□□ 0.03
PTPRR-209ENST00000549308 MAP3K2Q9Y2U5 619 aa15.21■□□□□ 0.03
PTPRR-209ENST00000549308 KDM2BQ8NHM5 1336 aa15.21■□□□□ 0.03
PTPRR-209ENST00000549308 NHSQ6T4R5 1651 aa15.21■□□□□ 0.03
PTPRR-209ENST00000549308 IGHDP01880 384 aa15.21■□□□□ 0.02
PTPRR-209ENST00000549308 RBM6P78332 1123 aaKnown RBP15.21■□□□□ 0.02
PTPRR-209ENST00000549308 TJP1Q07157 1748 aa15.21■□□□□ 0.02
PTPRR-209ENST00000549308 PALLDQ8WX93 1383 aa15.21■□□□□ 0.02
PTPRR-209ENST00000549308 ATP10DQ9P241 1426 aa15.2■□□□□ 0.02
PTPRR-209ENST00000549308 NBPF26B4DH59 902 aa15.2■□□□□ 0.02
PTPRR-209ENST00000549308 NBPF14Q5TI25 921 aa15.2■□□□□ 0.02
PTPRR-209ENST00000549308 NBPF10Q6P3W6 841 aaKnown RBP15.2■□□□□ 0.02
PTPRR-209ENST00000549308 LRP10Q7Z4F1 713 aa15.2■□□□□ 0.02
PTPRR-209ENST00000549308 NBPF15Q8N660 670 aa15.2■□□□□ 0.02
PTPRR-209ENST00000549308 SLC4A9Q96Q91 983 aa15.2■□□□□ 0.02
PTPRR-209ENST00000549308 MEIS3Q99687 375 aa15.2■□□□□ 0.02
PTPRR-209ENST00000549308 BEND3Q5T5X7 828 aa15.19■□□□□ 0.02
PTPRR-209ENST00000549308 LOC102724428A0A0B4J2F2 783 aa15.18■□□□□ 0.02
PTPRR-209ENST00000549308 GNAI3P08754 354 aa15.18■□□□□ 0.02
PTPRR-209ENST00000549308 CYP19A1P11511 503 aaPredicted RBP15.18■□□□□ 0.02
PTPRR-209ENST00000549308 ATP6V1AP38606 617 aa15.18■□□□□ 0.02
PTPRR-209ENST00000549308 SIK1P57059 783 aa15.18■□□□□ 0.02
PTPRR-209ENST00000549308 ANKRD13DQ6ZTN6 518 aa15.18■□□□□ 0.02
PTPRR-209ENST00000549308 BRWD3Q6RI45 1802 aa15.18■□□□□ 0.02
PTPRR-209ENST00000549308 KRT27Q7Z3Y8 459 aa15.17■□□□□ 0.02
PTPRR-209ENST00000549308 BTAF1O14981 1849 aa15.17■□□□□ 0.02
PTPRR-209ENST00000549308 ALDH1L1O75891 902 aa15.17■□□□□ 0.02
PTPRR-209ENST00000549308 NEXNQ0ZGT2 675 aa15.17■□□□□ 0.02
PTPRR-209ENST00000549308 HDAC1Q13547 482 aaPredicted RBP15.17■□□□□ 0.02
PTPRR-209ENST00000549308 ZNF330Q9Y3S2 320 aaPredicted RBP15.17■□□□□ 0.02
PTPRR-209ENST00000549308 SBF2Q86WG5 1849 aa15.16■□□□□ 0.02
PTPRR-209ENST00000549308 GNAI2P04899 355 aa15.16■□□□□ 0.02
PTPRR-209ENST00000549308 LINS1Q8NG48 757 aa15.16■□□□□ 0.02
PTPRR-209ENST00000549308 PLBD2Q8NHP8 589 aa15.16■□□□□ 0.02
PTPRR-209ENST00000549308 MYD88Q99836 296 aa15.16■□□□□ 0.02
PTPRR-209ENST00000549308 CICQ96RK0 1608 aaPredicted RBP15.16■□□□□ 0.02
PTPRR-209ENST00000549308 ARFGEF2Q9Y6D5 1785 aa15.16■□□□□ 0.02
PTPRR-209ENST00000549308 UBTFL1P0CB47 393 aaPredicted RBP15.15■□□□□ 0.02
PTPRR-209ENST00000549308 RXRBP28702 533 aa15.15■□□□□ 0.02
PTPRR-209ENST00000549308 TTLL7Q6ZT98 887 aa15.15■□□□□ 0.02
PTPRR-209ENST00000549308 PTF1AQ7RTS3 328 aa15.15■□□□□ 0.02
PTPRR-209ENST00000549308 METTL22Q9BUU2 404 aaPredicted RBP15.15■□□□□ 0.02
PTPRR-209ENST00000549308 FAM196AQ6ZSG2 479 aa15.14■□□□□ 0.01
PTPRR-209ENST00000549308 USP44Q9H0E7 712 aa15.14■□□□□ 0.01
PTPRR-209ENST00000549308 ZBTB1Q9Y2K1 713 aa15.14■□□□□ 0.01
PTPRR-209ENST00000549308 ITPK1Q13572 414 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms