RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 PPM1GO15355 546 aaPredicted RBP16.85■□□□□ 0.29
DDX54-206ENST00000549271 CNTNAP1P78357 1384 aa16.85■□□□□ 0.29
DDX54-206ENST00000549271 PCDH10Q9P2E7 1040 aa16.84■□□□□ 0.29
DDX54-206ENST00000549271 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.28
DDX54-206ENST00000549271 CTCFP49711 727 aaPredicted RBP16.83■□□□□ 0.28
DDX54-206ENST00000549271 FER1L6Q2WGJ9 1857 aa16.83■□□□□ 0.28
DDX54-206ENST00000549271 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
DDX54-206ENST00000549271 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
DDX54-206ENST00000549271 DPY19L2Q6NUT2 758 aa16.82■□□□□ 0.28
DDX54-206ENST00000549271 INTS5Q6P9B9 1019 aaKnown RBP16.82■□□□□ 0.28
DDX54-206ENST00000549271 TTLL6Q8N841 843 aa16.82■□□□□ 0.28
DDX54-206ENST00000549271 CABP4P57796 275 aa16.81■□□□□ 0.28
DDX54-206ENST00000549271 FAM161AQ3B820 660 aa16.81■□□□□ 0.28
DDX54-206ENST00000549271 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
DDX54-206ENST00000549271 USPL1Q5W0Q7 1092 aa16.8■□□□□ 0.28
DDX54-206ENST00000549271 POLKQ9UBT6 870 aa16.8■□□□□ 0.28
DDX54-206ENST00000549271 PASKQ96RG2 1323 aa16.79■□□□□ 0.28
DDX54-206ENST00000549271 ZPR1O75312 459 aa16.79■□□□□ 0.28
DDX54-206ENST00000549271 POTEIP0CG38 1075 aa16.79■□□□□ 0.28
DDX54-206ENST00000549271 POTEJP0CG39 1038 aa16.79■□□□□ 0.28
DDX54-206ENST00000549271 NFIXQ14938 502 aa16.79■□□□□ 0.28
DDX54-206ENST00000549271 ANKRD31Q8N7Z5 1873 aa16.78■□□□□ 0.28
DDX54-206ENST00000549271 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
DDX54-206ENST00000549271 VEGFBP49765 207 aa16.78■□□□□ 0.28
DDX54-206ENST00000549271 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
DDX54-206ENST00000549271 ABHD8Q96I13 439 aa16.78■□□□□ 0.28
DDX54-206ENST00000549271 WBP1LQ9NX94 342 aa16.78■□□□□ 0.28
DDX54-206ENST00000549271 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.28
DDX54-206ENST00000549271 LBX1P52954 281 aa16.77■□□□□ 0.28
DDX54-206ENST00000549271 C2CD5Q86YS7 1000 aa16.77■□□□□ 0.28
DDX54-206ENST00000549271 SCN4AP35499 1836 aa16.77■□□□□ 0.27
DDX54-206ENST00000549271 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
DDX54-206ENST00000549271 SERPINB2P05120 415 aa16.76■□□□□ 0.27
DDX54-206ENST00000549271 ERFEQ4G0M1 354 aa16.76■□□□□ 0.27
DDX54-206ENST00000549271 PLEKHO1Q53GL0 409 aaPredicted RBP16.76■□□□□ 0.27
DDX54-206ENST00000549271 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
DDX54-206ENST00000549271 NFATC2IPQ8NCF5 419 aa16.76■□□□□ 0.27
DDX54-206ENST00000549271 BCL2L12Q9HB09 334 aa16.76■□□□□ 0.27
DDX54-206ENST00000549271 NARFQ9UHQ1 456 aa16.76■□□□□ 0.27
DDX54-206ENST00000549271 H0YIN7 160 aa16.75■□□□□ 0.27
DDX54-206ENST00000549271 MTHFSP49914 203 aa16.75■□□□□ 0.27
DDX54-206ENST00000549271 AMOTQ4VCS5 1084 aa16.75■□□□□ 0.27
DDX54-206ENST00000549271 COL11A2P13942 1736 aaPredicted RBP16.75■□□□□ 0.27
DDX54-206ENST00000549271 LTBP3Q9NS15 1303 aa16.73■□□□□ 0.27
DDX54-206ENST00000549271 TMEM88BA6NKF7 163 aa16.73■□□□□ 0.27
DDX54-206ENST00000549271 DDNO94850 711 aaPredicted RBP16.73■□□□□ 0.27
DDX54-206ENST00000549271 HSPA8P11142 646 aaKnown RBP16.73■□□□□ 0.27
DDX54-206ENST00000549271 RGS19P49795 217 aa16.73■□□□□ 0.27
DDX54-206ENST00000549271 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
DDX54-206ENST00000549271 COL15A1P39059 1388 aa16.73■□□□□ 0.27
DDX54-206ENST00000549271 ITGBL1O95965 494 aaPredicted RBP16.72■□□□□ 0.27
DDX54-206ENST00000549271 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
DDX54-206ENST00000549271 LDHDQ86WU2 507 aa16.72■□□□□ 0.27
DDX54-206ENST00000549271 ADAMTSL1Q8N6G6 1762 aa16.72■□□□□ 0.27
DDX54-206ENST00000549271 C21orf2O43822 256 aa16.71■□□□□ 0.27
DDX54-206ENST00000549271 HSPA5P11021 654 aaKnown RBP16.71■□□□□ 0.27
DDX54-206ENST00000549271 MLLT1Q03111 559 aaPredicted RBP16.71■□□□□ 0.27
DDX54-206ENST00000549271 ARFGEF2Q9Y6D5 1785 aa16.71■□□□□ 0.27
DDX54-206ENST00000549271 CACNA1SQ13698 1873 aa16.71■□□□□ 0.27
DDX54-206ENST00000549271 TNRC18O15417 2968 aaPredicted RBP16.7■□□□□ 0.26
DDX54-206ENST00000549271 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.26
DDX54-206ENST00000549271 C1orf141Q5JVX7 400 aa16.7■□□□□ 0.26
DDX54-206ENST00000549271 L3MBTL3Q96JM7 780 aaPredicted RBP16.7■□□□□ 0.26
DDX54-206ENST00000549271 SLX4Q8IY92 1834 aa16.7■□□□□ 0.26
DDX54-206ENST00000549271 IQCA1LA6NCM1 817 aa16.69■□□□□ 0.26
DDX54-206ENST00000549271 RASSF10A6NK89 507 aa16.69■□□□□ 0.26
DDX54-206ENST00000549271 TAOK3Q9H2K8 898 aa16.69■□□□□ 0.26
DDX54-206ENST00000549271 TAF1DQ9H5J8 278 aaPredicted RBP16.69■□□□□ 0.26
DDX54-206ENST00000549271 PDZRN3Q9UPQ7 1066 aa16.69■□□□□ 0.26
DDX54-206ENST00000549271 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
DDX54-206ENST00000549271 THSD7BQ9C0I4 1608 aa16.68■□□□□ 0.26
DDX54-206ENST00000549271 ZNF622Q969S3 477 aaKnown RBP eCLIP16.68■□□□□ 0.264e-8■■□□□ 12.5
DDX54-206ENST00000549271 ZNF219Q9P2Y4 722 aaPredicted RBP16.68■□□□□ 0.26
DDX54-206ENST00000549271 BRIP1Q9BX63 1249 aa16.67■□□□□ 0.26
DDX54-206ENST00000549271 MRC1P22897 1456 aa16.67■□□□□ 0.26
DDX54-206ENST00000549271 SCN7AQ01118 1682 aa16.66■□□□□ 0.26
DDX54-206ENST00000549271 PDE6BP35913 854 aa16.66■□□□□ 0.26
DDX54-206ENST00000549271 MAP2K1Q02750 393 aaPredicted RBP16.66■□□□□ 0.26
DDX54-206ENST00000549271 AEBP1Q8IUX7 1158 aa16.66■□□□□ 0.26
DDX54-206ENST00000549271 UBR2Q8IWV8 1755 aa16.65■□□□□ 0.26
DDX54-206ENST00000549271 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
DDX54-206ENST00000549271 DEFB115Q30KQ5 88 aa16.65■□□□□ 0.26
DDX54-206ENST00000549271 PANK3Q9H999 370 aa16.65■□□□□ 0.26
DDX54-206ENST00000549271 SLC52A2Q9HAB3 445 aa16.65■□□□□ 0.26
DDX54-206ENST00000549271 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
DDX54-206ENST00000549271 CCDC85CA6NKD9 419 aa16.64■□□□□ 0.25
DDX54-206ENST00000549271 BICDL1Q6ZP65 573 aa16.64■□□□□ 0.25
DDX54-206ENST00000549271 POLR3GLQ9BT43 218 aa16.64■□□□□ 0.25
DDX54-206ENST00000549271 TBC1D9BQ66K14 1250 aa16.63■□□□□ 0.25
DDX54-206ENST00000549271 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
DDX54-206ENST00000549271 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
DDX54-206ENST00000549271 EIF5P55010 431 aaKnown RBP16.62■□□□□ 0.25
DDX54-206ENST00000549271 SLC39A6Q13433 755 aa16.62■□□□□ 0.25
DDX54-206ENST00000549271 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
DDX54-206ENST00000549271 SOGA3Q5TF21 947 aa16.62■□□□□ 0.25
DDX54-206ENST00000549271 CNKSR1Q969H4 720 aa16.62■□□□□ 0.25
DDX54-206ENST00000549271 AKAP4Q5JQC9 854 aa16.61■□□□□ 0.25
DDX54-206ENST00000549271 STYK1Q6J9G0 422 aa16.61■□□□□ 0.25
DDX54-206ENST00000549271 PRPF40BQ6NWY9 871 aaKnown RBP16.61■□□□□ 0.25
DDX54-206ENST00000549271 CCDC24Q8N4L8 307 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms