RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 ARID3AQ99856 593 aa14.43□□□□□ -0.1
RAPGEF3-219ENST00000549151 CHPF2Q9P2E5 772 aa14.43□□□□□ -0.1
RAPGEF3-219ENST00000549151 PLCB2Q00722 1185 aa14.43□□□□□ -0.1
RAPGEF3-219ENST00000549151 LGR6Q9HBX8 967 aa14.43□□□□□ -0.1
RAPGEF3-219ENST00000549151 CUL4AQ13619 759 aa14.42□□□□□ -0.1
RAPGEF3-219ENST00000549151 USP48Q86UV5 1035 aa14.42□□□□□ -0.1
RAPGEF3-219ENST00000549151 KDRP35968 1356 aa14.42□□□□□ -0.1
RAPGEF3-219ENST00000549151 MAP3K5Q99683 1374 aa14.42□□□□□ -0.1
RAPGEF3-219ENST00000549151 TSPY26PQ9H489 355 aa14.42□□□□□ -0.1
RAPGEF3-219ENST00000549151 ANAPC15P60006 121 aa14.41□□□□□ -0.1
RAPGEF3-219ENST00000549151 RASEFQ8IZ41 740 aa14.41□□□□□ -0.1
RAPGEF3-219ENST00000549151 STAP2Q9UGK3 403 aa14.41□□□□□ -0.1
RAPGEF3-219ENST00000549151 CNPY2Q9Y2B0 182 aa14.41□□□□□ -0.1
RAPGEF3-219ENST00000549151 FIBPO43427 364 aa14.4□□□□□ -0.1
RAPGEF3-219ENST00000549151 OFD1O75665 1012 aa14.4□□□□□ -0.1
RAPGEF3-219ENST00000549151 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.4□□□□□ -0.1
RAPGEF3-219ENST00000549151 VSIG10Q8N0Z9 540 aa14.4□□□□□ -0.1
RAPGEF3-219ENST00000549151 SSH3Q8TE77 659 aa14.4□□□□□ -0.1
RAPGEF3-219ENST00000549151 LMOD2Q6P5Q4 547 aa14.4□□□□□ -0.1
RAPGEF3-219ENST00000549151 MPRIPQ6WCQ1 1025 aa14.4□□□□□ -0.1
RAPGEF3-219ENST00000549151 HSPA4P34932 840 aa14.4□□□□□ -0.1
RAPGEF3-219ENST00000549151 SYAP1Q96A49 352 aaPredicted RBP14.4□□□□□ -0.1
RAPGEF3-219ENST00000549151 NOL7Q9UMY1 257 aaKnown RBP14.4□□□□□ -0.1
RAPGEF3-219ENST00000549151 WDR33Q9C0J8 1336 aaKnown RBP14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 RRP9O43818 475 aaKnown RBP14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 AK2P54819 239 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 TEFQ10587 303 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 GLIPR1L2Q4G1C9 344 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 CNTROBQ8N137 903 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 INTS4Q96HW7 963 aaKnown RBP14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 PDLIM2Q96JY6 352 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 DIAPH3Q9NSV4 1193 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 FAM13BQ9NYF5 915 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 PA2G4Q9UQ80 394 aaKnown RBP14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 SNX14Q9Y5W7 946 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 PLEKHG1Q9ULL1 1385 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 HTATSF1O43719 755 aaKnown RBP14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 TPM2P07951 284 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 KCNA6P17658 529 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 CASTP20810 708 aaKnown RBP14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 DNAAF4Q8WXU2 420 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 KIF1BPQ96EK5 621 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 PI4K2BQ8TCG2 481 aa14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 LRRC59Q96AG4 307 aaKnown RBP14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 ZNF830Q96NB3 372 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF3-219ENST00000549151 SSH2Q76I76 1423 aa14.38□□□□□ -0.11
RAPGEF3-219ENST00000549151 C9orf78Q9NZ63 289 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF3-219ENST00000549151 SGSM2O43147 1006 aa14.38□□□□□ -0.11
RAPGEF3-219ENST00000549151 KCNJ4P48050 445 aa14.38□□□□□ -0.11
RAPGEF3-219ENST00000549151 CCDC83Q8IWF9 413 aa14.38□□□□□ -0.11
RAPGEF3-219ENST00000549151 SMC3Q9UQE7 1217 aa14.38□□□□□ -0.11
RAPGEF3-219ENST00000549151 ZKSCAN5Q9Y2L8 839 aa14.38□□□□□ -0.11
RAPGEF3-219ENST00000549151 CHMP3Q9Y3E7 222 aa14.38□□□□□ -0.11
RAPGEF3-219ENST00000549151 RGPD1P0DJD0 1748 aa14.38□□□□□ -0.11
RAPGEF3-219ENST00000549151 DNTTIP2Q5QJE6 756 aaKnown RBP14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 NBPF6Q5VWK0 638 aa14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 NBPF4Q96M43 638 aa14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 RGPD8O14715 1765 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 TCHHQ07283 1943 aa14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 PRPF40BQ6NWY9 871 aaKnown RBP14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 USP25Q9UHP3 1055 aa14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 RAD50Q92878 1312 aa14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 RAB11FIP3O75154 756 aa14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 AIMP1Q12904 312 aaKnown RBP14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 CCDC39Q9UFE4 941 aa14.37□□□□□ -0.11
RAPGEF3-219ENST00000549151 VPS37CA5D8V6 355 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF3-219ENST00000549151 BTBD11A6QL63 1104 aa14.36□□□□□ -0.11
RAPGEF3-219ENST00000549151 LARGE1O95461 756 aa14.36□□□□□ -0.11
RAPGEF3-219ENST00000549151 JAKMIP1Q96N16 626 aaKnown RBP14.36□□□□□ -0.11
RAPGEF3-219ENST00000549151 SYT1P21579 422 aa14.36□□□□□ -0.11
RAPGEF3-219ENST00000549151 CWF19L2Q2TBE0 894 aaKnown RBP14.36□□□□□ -0.11
RAPGEF3-219ENST00000549151 ZNF530Q6P9A1 599 aaPredicted RBP14.36□□□□□ -0.11
RAPGEF3-219ENST00000549151 RUFY3Q7L099 469 aa14.36□□□□□ -0.11
RAPGEF3-219ENST00000549151 HCLS1P14317 486 aaPredicted RBP14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 EIF4A1P60842 406 aaKnown RBP14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 CLASRPQ8N2M8 674 aaKnown RBP14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 UBR1Q8IWV7 1749 aa14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 STX6O43752 255 aa14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 PTH1RQ03431 593 aa14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 LSG1Q9H089 658 aaKnown RBP14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 IFIT2P09913 472 aaKnown RBP14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 BEND3Q5T5X7 828 aa14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 SIL1Q9H173 461 aa14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 LIMCH1Q9UPQ0 1083 aa14.35□□□□□ -0.11
RAPGEF3-219ENST00000549151 UQCRHLA0A096LP55 91 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 PRAMEF22A3QJZ6 481 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 PHF14O94880 888 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 UQCRHP07919 91 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 ZSCAN22P10073 491 aaPredicted RBP14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 POLA2Q14181 598 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 ADCK5Q3MIX3 580 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 HS1BP3Q53T59 392 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 NECAB1Q8N987 351 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 TBX22Q9Y458 520 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 FMN2Q9NZ56 1722 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 MAP3K2Q9Y2U5 619 aa14.34□□□□□ -0.11
RAPGEF3-219ENST00000549151 PROSER3Q2NL68 480 aa14.33□□□□□ -0.11
RAPGEF3-219ENST00000549151 FERMT3Q86UX7 667 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms