RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 AMOTQ4VCS5 1084 aa21.15■□□□□ 0.98
CHMP1A-206ENST00000549139 INTS5Q6P9B9 1019 aaKnown RBP21.14■□□□□ 0.97
CHMP1A-206ENST00000549139 DIAPH1O60610 1272 aaKnown RBP21.13■□□□□ 0.97
CHMP1A-206ENST00000549139 PPP2R1AP30153 589 aa21.13■□□□□ 0.97
CHMP1A-206ENST00000549139 NFATC2IPQ8NCF5 419 aa21.13■□□□□ 0.97
CHMP1A-206ENST00000549139 SMC1BQ8NDV3 1235 aa21.13■□□□□ 0.97
CHMP1A-206ENST00000549139 ZC3H4Q9UPT8 1303 aaKnown RBP21.12■□□□□ 0.97
CHMP1A-206ENST00000549139 PRELPP51888 382 aa21.11■□□□□ 0.97
CHMP1A-206ENST00000549139 ZNF316A6NFI3 1004 aaPredicted RBP21.1■□□□□ 0.97
CHMP1A-206ENST00000549139 AEBP1Q8IUX7 1158 aa21.1■□□□□ 0.97
CHMP1A-206ENST00000549139 AFDNP55196 1824 aaKnown RBP21.1■□□□□ 0.97
CHMP1A-206ENST00000549139 COL3A1P02461 1466 aaPredicted RBP21.09■□□□□ 0.97
CHMP1A-206ENST00000549139 RASSF7Q02833 373 aa21.09■□□□□ 0.97
CHMP1A-206ENST00000549139 SULT6B1Q6IMI4 303 aa21.09■□□□□ 0.97
CHMP1A-206ENST00000549139 TNS4Q8IZW8 715 aa21.09■□□□□ 0.97
CHMP1A-206ENST00000549139 CFAP53Q96M91 514 aa21.09■□□□□ 0.97
CHMP1A-206ENST00000549139 NRXN2Q9P2S2 1712 aa21.09■□□□□ 0.97
CHMP1A-206ENST00000549139 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.97
CHMP1A-206ENST00000549139 CAPN15O75808 1086 aa21.08■□□□□ 0.97
CHMP1A-206ENST00000549139 USPL1Q5W0Q7 1092 aa21.08■□□□□ 0.97
CHMP1A-206ENST00000549139 SOS1Q07889 1333 aaPredicted RBP21.07■□□□□ 0.96
CHMP1A-206ENST00000549139 RALBP1Q15311 655 aa21.07■□□□□ 0.96
CHMP1A-206ENST00000549139 C1orf141Q5JVX7 400 aa21.07■□□□□ 0.96
CHMP1A-206ENST00000549139 DLEC1Q9Y238 1755 aa21.06■□□□□ 0.96
CHMP1A-206ENST00000549139 GLTPD2A6NH11 291 aa21.06■□□□□ 0.96
CHMP1A-206ENST00000549139 DNAJC10Q8IXB1 793 aa21.06■□□□□ 0.96
CHMP1A-206ENST00000549139 CCDC88AQ3V6T2 1871 aa21.05■□□□□ 0.96
CHMP1A-206ENST00000549139 ZPR1O75312 459 aa21.05■□□□□ 0.96
CHMP1A-206ENST00000549139 VEGFAP15692 232 aaPredicted RBP21.05■□□□□ 0.96
CHMP1A-206ENST00000549139 LMNB1P20700 586 aa21.05■□□□□ 0.96
CHMP1A-206ENST00000549139 NFIXQ14938 502 aa21.05■□□□□ 0.96
CHMP1A-206ENST00000549139 HSPA1AP0DMV8 641 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-206ENST00000549139 HSPA1BP0DMV9 641 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-206ENST00000549139 CYP19A1P11511 503 aaPredicted RBP21.03■□□□□ 0.96
CHMP1A-206ENST00000549139 BCL2L12Q9HB09 334 aa21.03■□□□□ 0.96
CHMP1A-206ENST00000549139 NARFQ9UHQ1 456 aa21.03■□□□□ 0.96
CHMP1A-206ENST00000549139 POTECB2RU33 542 aa21.02■□□□□ 0.96
CHMP1A-206ENST00000549139 HMOX1P09601 288 aa21.02■□□□□ 0.96
CHMP1A-206ENST00000549139 NUDCQ9Y266 331 aa21.02■□□□□ 0.96
CHMP1A-206ENST00000549139 NFKBIEO00221 500 aa21.01■□□□□ 0.95
CHMP1A-206ENST00000549139 U2SURPO15042 1029 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-206ENST00000549139 TTLL6Q8N841 843 aa21.01■□□□□ 0.95
CHMP1A-206ENST00000549139 SLC52A2Q9HAB3 445 aa21.01■□□□□ 0.95
CHMP1A-206ENST00000549139 TIAM2Q8IVF5 1701 aa21.01■□□□□ 0.95
CHMP1A-206ENST00000549139 AKAP4Q5JQC9 854 aa21■□□□□ 0.95
CHMP1A-206ENST00000549139 MRC1P22897 1456 aa21■□□□□ 0.95
CHMP1A-206ENST00000549139 COL15A1P39059 1388 aa20.99■□□□□ 0.95
CHMP1A-206ENST00000549139 CARMIL3Q8ND23 1372 aa20.99■□□□□ 0.95
CHMP1A-206ENST00000549139 SERPINB2P05120 415 aa20.99■□□□□ 0.95
CHMP1A-206ENST00000549139 LGR6Q9HBX8 967 aa20.99■□□□□ 0.95
CHMP1A-206ENST00000549139 ZBTB1Q9Y2K1 713 aa20.99■□□□□ 0.95
CHMP1A-206ENST00000549139 VIRMAQ69YN4 1812 aaKnown RBP20.99■□□□□ 0.95
CHMP1A-206ENST00000549139 SLC39A6Q13433 755 aa20.97■□□□□ 0.95
CHMP1A-206ENST00000549139 C2CD5Q86YS7 1000 aa20.97■□□□□ 0.95
CHMP1A-206ENST00000549139 MYBBP1AQ9BQG0 1328 aaKnown RBP20.96■□□□□ 0.95
CHMP1A-206ENST00000549139 DICER1Q9UPY3 1922 aaKnown RBP20.96■□□□□ 0.95
CHMP1A-206ENST00000549139 RNMTO43148 476 aaKnown RBP20.95■□□□□ 0.94
CHMP1A-206ENST00000549139 PRKRIP1Q9H875 184 aaPredicted RBP20.95■□□□□ 0.94
CHMP1A-206ENST00000549139 ANKRD31Q8N7Z5 1873 aa20.94■□□□□ 0.94
CHMP1A-206ENST00000549139 H0YIN7 160 aa20.94■□□□□ 0.94
CHMP1A-206ENST00000549139 VSIG10Q8N0Z9 540 aa20.94■□□□□ 0.94
CHMP1A-206ENST00000549139 FER1L6Q2WGJ9 1857 aa20.94■□□□□ 0.94
CHMP1A-206ENST00000549139 U2AF1L5P0DN76 240 aaPredicted RBP20.93■□□□□ 0.94
CHMP1A-206ENST00000549139 U2AF1Q01081 240 aaKnown RBP eCLIP20.93■□□□□ 0.94
CHMP1A-206ENST00000549139 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
CHMP1A-206ENST00000549139 EIF5P55010 431 aaKnown RBP20.92■□□□□ 0.94
CHMP1A-206ENST00000549139 MTHFSDQ2M296 383 aaKnown RBP20.92■□□□□ 0.94
CHMP1A-206ENST00000549139 UBR2Q8IWV8 1755 aa20.92■□□□□ 0.94
CHMP1A-206ENST00000549139 DPY19L2Q6NUT2 758 aa20.91■□□□□ 0.94
CHMP1A-206ENST00000549139 PRKAR2BP31323 418 aa20.9■□□□□ 0.94
CHMP1A-206ENST00000549139 CREBZFQ9NS37 354 aa20.9■□□□□ 0.94
CHMP1A-206ENST00000549139 COL11A2P13942 1736 aaPredicted RBP20.9■□□□□ 0.94
CHMP1A-206ENST00000549139 CANXP27824 592 aaKnown RBP20.89■□□□□ 0.93
CHMP1A-206ENST00000549139 BRIP1Q9BX63 1249 aa20.89■□□□□ 0.93
CHMP1A-206ENST00000549139 C21orf2O43822 256 aa20.88■□□□□ 0.93
CHMP1A-206ENST00000549139 ERFEQ4G0M1 354 aa20.88■□□□□ 0.93
CHMP1A-206ENST00000549139 TBC1D9BQ66K14 1250 aa20.88■□□□□ 0.93
CHMP1A-206ENST00000549139 BICDL1Q6ZP65 573 aa20.88■□□□□ 0.93
CHMP1A-206ENST00000549139 GAS2L2Q8NHY3 880 aa20.88■□□□□ 0.93
CHMP1A-206ENST00000549139 PDZRN3Q9UPQ7 1066 aa20.88■□□□□ 0.93
CHMP1A-206ENST00000549139 LTBP3Q9NS15 1303 aa20.87■□□□□ 0.93
CHMP1A-206ENST00000549139 POTEIP0CG38 1075 aa20.87■□□□□ 0.93
CHMP1A-206ENST00000549139 POTEJP0CG39 1038 aa20.87■□□□□ 0.93
CHMP1A-206ENST00000549139 PRR5LQ6MZQ0 368 aa20.87■□□□□ 0.93
CHMP1A-206ENST00000549139 CHADLQ6NUI6 762 aa20.87■□□□□ 0.93
CHMP1A-206ENST00000549139 PHACTR3Q96KR7 559 aa20.87■□□□□ 0.93
CHMP1A-206ENST00000549139 ZNF622Q969S3 477 aaKnown RBP eCLIP20.86■□□□□ 0.93
CHMP1A-206ENST00000549139 MKRN1Q9UHC7 482 aaKnown RBP20.86■□□□□ 0.93
CHMP1A-206ENST00000549139 SCN7AQ01118 1682 aa20.86■□□□□ 0.93
CHMP1A-206ENST00000549139 A0A087WZG4 1122 aa20.85■□□□□ 0.93
CHMP1A-206ENST00000549139 PDE6BP35913 854 aa20.85■□□□□ 0.93
CHMP1A-206ENST00000549139 PNNQ9H307 717 aaKnown RBP20.85■□□□□ 0.93
CHMP1A-206ENST00000549139 SLX4Q8IY92 1834 aa20.85■□□□□ 0.93
CHMP1A-206ENST00000549139 DDNO94850 711 aaPredicted RBP20.84■□□□□ 0.93
CHMP1A-206ENST00000549139 STARD3NLO95772 234 aa20.84■□□□□ 0.93
CHMP1A-206ENST00000549139 CCDC24Q8N4L8 307 aa20.84■□□□□ 0.93
CHMP1A-206ENST00000549139 ZNF219Q9P2Y4 722 aaPredicted RBP20.84■□□□□ 0.93
CHMP1A-206ENST00000549139 PASKQ96RG2 1323 aa20.83■□□□□ 0.93
CHMP1A-206ENST00000549139 DLG5Q8TDM6 1919 aa20.83■□□□□ 0.93
CHMP1A-206ENST00000549139 GNAT3A8MTJ3 354 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms