RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 PLEKHG3A1L390 1219 aa14.94□□□□□ -0.02
SLC38A1-206ENST00000549049 MCM2P49736 904 aa14.94□□□□□ -0.02
SLC38A1-206ENST00000549049 MPRIPQ6WCQ1 1025 aa14.94□□□□□ -0.02
SLC38A1-206ENST00000549049 BCL11BQ9C0K0 894 aaPredicted RBP14.94□□□□□ -0.02
SLC38A1-206ENST00000549049 SMC3Q9UQE7 1217 aa14.94□□□□□ -0.02
SLC38A1-206ENST00000549049 CLTCQ00610 1675 aaKnown RBP14.94□□□□□ -0.02
SLC38A1-206ENST00000549049 LARGE1O95461 756 aa14.93□□□□□ -0.02
SLC38A1-206ENST00000549049 PRPF40BQ6NWY9 871 aaKnown RBP14.93□□□□□ -0.02
SLC38A1-206ENST00000549049 FAM173BQ6P4H8 233 aa14.93□□□□□ -0.02
SLC38A1-206ENST00000549049 GIMAP6Q6P9H5 292 aa14.93□□□□□ -0.02
SLC38A1-206ENST00000549049 DIAPH3Q9NSV4 1193 aa14.93□□□□□ -0.02
SLC38A1-206ENST00000549049 IBTKQ9P2D0 1353 aaPredicted RBP14.93□□□□□ -0.02
SLC38A1-206ENST00000549049 SYAP1Q96A49 352 aaPredicted RBP14.93□□□□□ -0.02
SLC38A1-206ENST00000549049 SIL1Q9H173 461 aa14.93□□□□□ -0.02
SLC38A1-206ENST00000549049 SNX14Q9Y5W7 946 aa14.93□□□□□ -0.02
SLC38A1-206ENST00000549049 EID1Q9Y6B2 187 aa14.93□□□□□ -0.02
SLC38A1-206ENST00000549049 CUL4AQ13619 759 aa14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 JAKMIP1Q96N16 626 aaKnown RBP14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 CCDC39Q9UFE4 941 aa14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 WDR33Q9C0J8 1336 aaKnown RBP14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 HOXC9P31274 260 aa14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 SPC24Q8NBT2 197 aa14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 LRRC59Q96AG4 307 aaKnown RBP14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 PDLIM2Q96JY6 352 aa14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 C9orf78Q9NZ63 289 aaPredicted RBP14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 USP6P35125 1406 aa14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 FLT4P35916 1363 aa14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 SALL3Q9BXA9 1300 aa14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 RICTORQ6R327 1708 aa14.92□□□□□ -0.02
SLC38A1-206ENST00000549049 DLC1Q96QB1 1528 aa14.91□□□□□ -0.02
SLC38A1-206ENST00000549049 SYT1P21579 422 aa14.91□□□□□ -0.02
SLC38A1-206ENST00000549049 ADCK5Q3MIX3 580 aa14.91□□□□□ -0.02
SLC38A1-206ENST00000549049 TNRQ92752 1358 aa14.91□□□□□ -0.02
SLC38A1-206ENST00000549049 PTH1RQ03431 593 aa14.91□□□□□ -0.02
SLC38A1-206ENST00000549049 DNM1Q05193 864 aaKnown RBP14.91□□□□□ -0.02
SLC38A1-206ENST00000549049 HSPA4P34932 840 aa14.9□□□□□ -0.02
SLC38A1-206ENST00000549049 TEFQ10587 303 aa14.9□□□□□ -0.02
SLC38A1-206ENST00000549049 CWF19L2Q2TBE0 894 aaKnown RBP14.9□□□□□ -0.02
SLC38A1-206ENST00000549049 RUFY3Q7L099 469 aa14.9□□□□□ -0.02
SLC38A1-206ENST00000549049 CNTROBQ8N137 903 aa14.9□□□□□ -0.02
SLC38A1-206ENST00000549049 CCDC8Q9H0W5 538 aaPredicted RBP14.9□□□□□ -0.02
SLC38A1-206ENST00000549049 RIMS1Q86UR5 1692 aaKnown RBP14.9□□□□□ -0.02
SLC38A1-206ENST00000549049 PRAMEF22A3QJZ6 481 aa14.9□□□□□ -0.02
SLC38A1-206ENST00000549049 STK3Q13188 491 aa14.9□□□□□ -0.02
SLC38A1-206ENST00000549049 SETD1BQ9UPS6 1966 aaKnown RBP14.9□□□□□ -0.02
SLC38A1-206ENST00000549049 SGSM2O43147 1006 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 STX6O43752 255 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 COL9A3Q14050 684 aaPredicted RBP14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 CAMK4Q16566 473 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 TMEM2Q9UHN6 1383 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 PPFIA3O75145 1194 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 ADCY5O95622 1261 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 FOSBP53539 338 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 PI4K2BQ8TCG2 481 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 SSH3Q8TE77 659 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 DNAAF4Q8WXU2 420 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 KIF1BPQ96EK5 621 aa14.89□□□□□ -0.03
SLC38A1-206ENST00000549049 IGSF1Q8N6C5 1336 aa14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 IFIT2P09913 472 aaKnown RBP14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 GJB2P29033 226 aa14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 ANAPC15P60006 121 aa14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 KLHDC4Q8TBB5 520 aa14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 STAP2Q9UGK3 403 aa14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 OVOS2A0A0J9YW53 1432 aa14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 OVOS2Q6IE36 1432 aa14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 ZSCAN22P10073 491 aaPredicted RBP14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 INTS4Q96HW7 963 aaKnown RBP14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 SBNO1A3KN83 1393 aa14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
SLC38A1-206ENST00000549049 AACSQ86V21 672 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 CLASRPQ8N2M8 674 aaKnown RBP14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 TAOK2Q9UL54 1235 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 LIMCH1Q9UPQ0 1083 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 PROSER3Q2NL68 480 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 NBPF6Q5VWK0 638 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 NBPF4Q96M43 638 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 PDRG1Q9NUG6 133 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 PIP4K2AP48426 406 aaPredicted RBP14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 ZNF530Q6P9A1 599 aaPredicted RBP14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 LSG1Q9H089 658 aaKnown RBP14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 BOLA2Q9H3K6 86 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 TFIP11Q9UBB9 837 aaKnown RBP14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 PPP6R1Q9UPN7 881 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 NDUFB9Q9Y6M9 179 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 ARHGEF10O15013 1369 aa14.87□□□□□ -0.03
SLC38A1-206ENST00000549049 BTBD11A6QL63 1104 aa14.86□□□□□ -0.03
SLC38A1-206ENST00000549049 KIAA2012Q0VF49 1180 aa14.86□□□□□ -0.03
SLC38A1-206ENST00000549049 FAM227BQ96M60 508 aa14.86□□□□□ -0.03
SLC38A1-206ENST00000549049 ZNF500O60304 480 aaPredicted RBP14.86□□□□□ -0.03
SLC38A1-206ENST00000549049 PHF14O94880 888 aa14.86□□□□□ -0.03
SLC38A1-206ENST00000549049 KCNA6P17658 529 aa14.86□□□□□ -0.03
SLC38A1-206ENST00000549049 PDCL3Q9H2J4 239 aa14.86□□□□□ -0.03
SLC38A1-206ENST00000549049 PRDM10Q9NQV6 1147 aa14.86□□□□□ -0.03
SLC38A1-206ENST00000549049 MAP3K2Q9Y2U5 619 aa14.86□□□□□ -0.03
SLC38A1-206ENST00000549049 EDC3Q96F86 508 aaKnown RBP14.85□□□□□ -0.03
SLC38A1-206ENST00000549049 RAD50Q92878 1312 aa14.85□□□□□ -0.03
SLC38A1-206ENST00000549049 MAP3K5Q99683 1374 aa14.85□□□□□ -0.03
SLC38A1-206ENST00000549049 F13A1P00488 732 aa14.85□□□□□ -0.03
SLC38A1-206ENST00000549049 PKNOX2Q96KN3 472 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms