RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 ARHGAP23Q9P227 1491 aa2.18□□□□□ -2.06
LGR5-205ENST00000549015 FANCIQ9NVI1 1328 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 EDC4Q6P2E9 1401 aaKnown RBP2.17□□□□□ -2.06
LGR5-205ENST00000549015 RIMS2Q9UQ26 1411 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 ALKQ9UM73 1620 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 NRXN3Q9Y4C0 1643 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 USP17L3A6NCW0 530 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 USP17L4A6NCW7 530 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 UNCXA6NJT0 531 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 PIK3CDO00329 1044 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 RAPGEF3O95398 923 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 CFHP08603 1231 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 SLC10A3P09131 477 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 SKIP12755 728 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 RASA1P20936 1047 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 ARID4AP29374 1257 aaPredicted RBP2.17□□□□□ -2.06
LGR5-205ENST00000549015 RRP1P56182 461 aaKnown RBP2.17□□□□□ -2.06
LGR5-205ENST00000549015 FAM69CQ0P6D2 419 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 CCDC184Q52MB2 194 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 SWT1Q5T5J6 900 aaKnown RBP2.17□□□□□ -2.06
LGR5-205ENST00000549015 TMEM164Q5U3C3 297 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 GGT6Q6P531 493 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 LARP1Q6PKG0 1096 aaKnown RBP2.17□□□□□ -2.06
LGR5-205ENST00000549015 USP17L2Q6R6M4 530 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 USP17L1Q7RTZ2 530 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 DEPDC4Q8N2C3 294 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 STK32AQ8WU08 396 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 CFAP53Q96M91 514 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 POLR3GLQ9BT43 218 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 BCL2L13Q9BXK5 485 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 PNNQ9H307 717 aaKnown RBP2.17□□□□□ -2.06
LGR5-205ENST00000549015 ZSWIM6Q9HCJ5 1215 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 TERF2IPQ9NYB0 399 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 BIN2Q9UBW5 565 aaPredicted RBP2.17□□□□□ -2.06
LGR5-205ENST00000549015 RCAN3Q9UKA8 241 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 ZMIZ1Q9ULJ6 1067 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 A0A1W2PP64 1363 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 AATKQ6ZMQ8 1374 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 TNRQ92752 1358 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 TMEM2Q9UHN6 1383 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 PLEKHG1Q9ULL1 1385 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 COL3A1P02461 1466 aaPredicted RBP2.17□□□□□ -2.06
LGR5-205ENST00000549015 SHPRHQ149N8 1683 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 KIF13AQ9H1H9 1805 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 PPIP5K1Q6PFW1 1433 aa2.17□□□□□ -2.06
LGR5-205ENST00000549015 RIMS1Q86UR5 1692 aaKnown RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 TOPAZ1Q8N9V7 1692 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 NRKQ7Z2Y5 1582 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 CD163L1Q9NR16 1453 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 KIF24Q5T7B8 1368 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 PNPLA6Q8IY17 1366 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 PLEKHG2Q9H7P9 1386 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 RBM47A0AV96 593 aaKnown RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 ZBBXA8MT70 800 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 USP17L5A8MUK1 530 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 HMGB1P09429 215 aaKnown RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 FBXO45P0C2W1 286 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 HOXB3P14651 431 aaPredicted RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 ATP6V1AP38606 617 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 MARSP56192 900 aaKnown RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 NR1H3Q13133 447 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 IDI1Q13907 227 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 ELOAQ14241 798 aaKnown RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 SLFNL1Q499Z3 407 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 CC2D1BQ5T0F9 858 aaKnown RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 CYB5RLQ6IPT4 315 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 GPR153Q6NV75 609 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 TRMT2AQ8IZ69 625 aaKnown RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 NFATC2IPQ8NCF5 419 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 FAM200AQ8TCP9 573 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 ESF1Q9H501 851 aaKnown RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 MKRN1Q9UHC7 482 aaKnown RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 SEPT9Q9UHD8 586 aaPredicted RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 UBR1Q8IWV7 1749 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 CPSF1Q10570 1443 aaKnown RBP2.16□□□□□ -2.06
LGR5-205ENST00000549015 ANKARQ7Z5J8 1434 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 IL16Q14005 1332 aa2.16□□□□□ -2.06
LGR5-205ENST00000549015 ZNF142P52746 1687 aaPredicted RBP2.15□□□□□ -2.06
LGR5-205ENST00000549015 USP54Q70EL1 1684 aa2.15□□□□□ -2.06
LGR5-205ENST00000549015 LMTK3Q96Q04 1460 aa2.15□□□□□ -2.06
LGR5-205ENST00000549015 PLEKHH1Q9ULM0 1364 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 MON2Q7Z3U7 1717 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 XRN1Q8IZH2 1706 aaKnown RBP2.15□□□□□ -2.07
LGR5-205ENST00000549015 FAM196BA6NMK8 535 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L15C9J2P7 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L10C9JJH3 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L13C9JLJ4 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L12C9JPN9 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L11C9JVI0 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L21D6R901 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L18D6R9N7 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L22D6RA61 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L17D6RBQ6 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L19D6RCP7 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 USP17L20D6RJB6 530 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 ATP5J2-PTCD1G3V325 749 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 TCERG1O14776 1098 aaKnown RBP2.15□□□□□ -2.07
LGR5-205ENST00000549015 ERCC3P19447 782 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 ATP2B4P23634 1241 aa2.15□□□□□ -2.07
LGR5-205ENST00000549015 SSFA2P28290 1259 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms