RNA–Protein interactions for RNA: ENST00000548921.5

SCRN3-213, Transcript of secernin 3, humanhuman

TSL 1 (best)

Gene SCRN3, Length 1,674 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-213ENST00000548921 USP16Q9Y5T5 823 aa15.12■□□□□ 0.01
SCRN3-213ENST00000548921 BRWD3Q6RI45 1802 aa15.12■□□□□ 0.01
SCRN3-213ENST00000548921 SBF2Q86WG5 1849 aa15.12■□□□□ 0.01
SCRN3-213ENST00000548921 N4BP2Q86UW6 1770 aaPredicted RBP15.12■□□□□ 0.01
SCRN3-213ENST00000548921 AAMPQ13685 434 aa15.12■□□□□ 0.01
SCRN3-213ENST00000548921 ZNF772Q68DY9 489 aaPredicted RBP15.12■□□□□ 0.01
SCRN3-213ENST00000548921 SYTL4Q96C24 671 aaPredicted RBP15.12■□□□□ 0.01
SCRN3-213ENST00000548921 PTCD1O75127 700 aaKnown RBP15.11■□□□□ 0.01
SCRN3-213ENST00000548921 PDIA6Q15084 440 aa15.11■□□□□ 0.01
SCRN3-213ENST00000548921 B4GALNT3Q6L9W6 998 aa15.11■□□□□ 0.01
SCRN3-213ENST00000548921 SEPT12Q8IYM1 358 aa15.11■□□□□ 0.01
SCRN3-213ENST00000548921 ACSBG1Q96GR2 724 aa15.11■□□□□ 0.01
SCRN3-213ENST00000548921 PHAXQ9H814 394 aaKnown RBP15.11■□□□□ 0.01
SCRN3-213ENST00000548921 DDX19BQ9UMR2 479 aa15.11■□□□□ 0.01
SCRN3-213ENST00000548921 ITPRIPQ8IWB1 547 aa15.1■□□□□ 0.01
SCRN3-213ENST00000548921 VSIG10Q8N0Z9 540 aa15.1■□□□□ 0.01
SCRN3-213ENST00000548921 DDX21Q9NR30 783 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCRN3-213ENST00000548921 PROSER3Q2NL68 480 aa15.09■□□□□ 0.01
SCRN3-213ENST00000548921 INTS3Q68E01 1043 aaKnown RBP15.09■□□□□ 0.01
SCRN3-213ENST00000548921 CCDC136Q96JN2 1154 aa15.09■□□□□ 0.01
SCRN3-213ENST00000548921 HYPKQ9NX55 129 aa15.09■□□□□ 0.01
SCRN3-213ENST00000548921 NHSQ6T4R5 1651 aa15.09■□□□□ 0.01
SCRN3-213ENST00000548921 ANXA1P04083 346 aa15.09■□□□□ 0.01
SCRN3-213ENST00000548921 FKBP5Q13451 457 aaPredicted RBP15.09■□□□□ 0.01
SCRN3-213ENST00000548921 TJP1Q07157 1748 aa15.08■□□□□ 0
SCRN3-213ENST00000548921 CICQ96RK0 1608 aaPredicted RBP15.07■□□□□ 0
SCRN3-213ENST00000548921 ERBB4Q15303 1308 aa15.07■□□□□ 0
SCRN3-213ENST00000548921 F6X3S4 739 aa15.07■□□□□ 0
SCRN3-213ENST00000548921 KCNQ2O43526 872 aa15.07■□□□□ 0
SCRN3-213ENST00000548921 RBM6P78332 1123 aaKnown RBP15.07■□□□□ 0
SCRN3-213ENST00000548921 LRP10Q7Z4F1 713 aa15.07■□□□□ 0
SCRN3-213ENST00000548921 TEX13AQ9BXU3 409 aaPredicted RBP15.07■□□□□ 0
SCRN3-213ENST00000548921 BTAF1O14981 1849 aa15.07■□□□□ 0
SCRN3-213ENST00000548921 PXDNLA1KZ92 1463 aa15.07■□□□□ 0
SCRN3-213ENST00000548921 ZBTB7BO15156 539 aaPredicted RBP15.06■□□□□ 0
SCRN3-213ENST00000548921 SLC4A9Q96Q91 983 aa15.06■□□□□ 0
SCRN3-213ENST00000548921 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
SCRN3-213ENST00000548921 ZNF831Q5JPB2 1677 aa15.06■□□□□ 0
SCRN3-213ENST00000548921 ZBTB40Q9NUA8 1239 aa15.06■□□□□ 0
SCRN3-213ENST00000548921 FAM182BQ5T319 152 aa15.05■□□□□ -0
SCRN3-213ENST00000548921 CHMP4BQ9H444 224 aaKnown RBP15.05■□□□□ -0
SCRN3-213ENST00000548921 ADCY9O60503 1353 aa15.04■□□□□ -0
SCRN3-213ENST00000548921 NBPF26B4DH59 902 aa15.04■□□□□ -0
SCRN3-213ENST00000548921 MYL6BP14649 208 aa15.04■□□□□ -0
SCRN3-213ENST00000548921 CCT4P50991 539 aaKnown RBP15.04■□□□□ -0
SCRN3-213ENST00000548921 NBPF14Q5TI25 921 aa15.04■□□□□ -0
SCRN3-213ENST00000548921 NBPF10Q6P3W6 841 aaKnown RBP15.04■□□□□ -0
SCRN3-213ENST00000548921 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
SCRN3-213ENST00000548921 DNAJC10Q8IXB1 793 aa15.04■□□□□ -0
SCRN3-213ENST00000548921 NBPF15Q8N660 670 aa15.04■□□□□ -0
SCRN3-213ENST00000548921 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
SCRN3-213ENST00000548921 PI4KAP2A4QPH2 592 aa15.03■□□□□ -0
SCRN3-213ENST00000548921 KSR2Q6VAB6 950 aa15.03■□□□□ -0
SCRN3-213ENST00000548921 PI4KAP1Q8N8J0 262 aa15.03■□□□□ -0
SCRN3-213ENST00000548921 RGS17Q9UGC6 210 aaPredicted RBP15.03■□□□□ -0
SCRN3-213ENST00000548921 PALLDQ8WX93 1383 aa15.03■□□□□ -0
SCRN3-213ENST00000548921 STARD3NLO95772 234 aa15.03■□□□□ -0
SCRN3-213ENST00000548921 A1BGP04217 495 aa15.03■□□□□ -0
SCRN3-213ENST00000548921 PIP4K2AP48426 406 aaPredicted RBP15.03■□□□□ -0
SCRN3-213ENST00000548921 DNAAF4Q8WXU2 420 aa15.03■□□□□ -0
SCRN3-213ENST00000548921 PCDHB15Q9Y5E8 787 aa15.03■□□□□ -0
SCRN3-213ENST00000548921 ARFGEF2Q9Y6D5 1785 aa15.03■□□□□ -0
SCRN3-213ENST00000548921 COL5A3P25940 1745 aaPredicted RBP15.02■□□□□ -0
SCRN3-213ENST00000548921 DDX58O95786 925 aaKnown RBP15.02□□□□□ -0.01
SCRN3-213ENST00000548921 COPS6Q7L5N1 327 aa15.02□□□□□ -0.01
SCRN3-213ENST00000548921 PTF1AQ7RTS3 328 aa15.02□□□□□ -0.01
SCRN3-213ENST00000548921 KRT27Q7Z3Y8 459 aa15.02□□□□□ -0.01
SCRN3-213ENST00000548921 XAGE3Q8WTP9 111 aa15.02□□□□□ -0.01
SCRN3-213ENST00000548921 LOC102724428A0A0B4J2F2 783 aa15.01□□□□□ -0.01
SCRN3-213ENST00000548921 LY75O60449 1722 aa15.01□□□□□ -0.01
SCRN3-213ENST00000548921 CYP19A1P11511 503 aaPredicted RBP15.01□□□□□ -0.01
SCRN3-213ENST00000548921 SIK1P57059 783 aa15.01□□□□□ -0.01
SCRN3-213ENST00000548921 AIMP1Q12904 312 aaKnown RBP15.01□□□□□ -0.01
SCRN3-213ENST00000548921 NUP188Q5SRE5 1749 aa15.01□□□□□ -0.01
SCRN3-213ENST00000548921 ATP10DQ9P241 1426 aa15.01□□□□□ -0.01
SCRN3-213ENST00000548921 MAP3K2Q9Y2U5 619 aa15.01□□□□□ -0.01
SCRN3-213ENST00000548921 RREB1Q92766 1687 aa15.01□□□□□ -0.01
SCRN3-213ENST00000548921 RXRBP28702 533 aa15□□□□□ -0.01
SCRN3-213ENST00000548921 MYH14Q7Z406 1995 aaKnown RBP15□□□□□ -0.01
SCRN3-213ENST00000548921 KDM2BQ8NHM5 1336 aa15□□□□□ -0.01
SCRN3-213ENST00000548921 ATP6V1AP38606 617 aa15□□□□□ -0.01
SCRN3-213ENST00000548921 BEND3Q5T5X7 828 aa15□□□□□ -0.01
SCRN3-213ENST00000548921 FAM196AQ6ZSG2 479 aa15□□□□□ -0.01
SCRN3-213ENST00000548921 IGHDP01880 384 aa14.99□□□□□ -0.01
SCRN3-213ENST00000548921 ANKRD13DQ6ZTN6 518 aa14.99□□□□□ -0.01
SCRN3-213ENST00000548921 SRCIN1Q9C0H9 1055 aa14.99□□□□□ -0.01
SCRN3-213ENST00000548921 CENPQQ7L2Z9 268 aaPredicted RBP14.98□□□□□ -0.01
SCRN3-213ENST00000548921 RIC3Q7Z5B4 369 aa14.98□□□□□ -0.01
SCRN3-213ENST00000548921 MEIS3Q99687 375 aa14.98□□□□□ -0.01
SCRN3-213ENST00000548921 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
SCRN3-213ENST00000548921 AFDNP55196 1824 aaKnown RBP14.98□□□□□ -0.01
SCRN3-213ENST00000548921 TAF1LQ8IZX4 1826 aa14.98□□□□□ -0.01
SCRN3-213ENST00000548921 ITPK1Q13572 414 aa14.97□□□□□ -0.01
SCRN3-213ENST00000548921 POTEAQ6S8J7 498 aa14.97□□□□□ -0.01
SCRN3-213ENST00000548921 PLBD2Q8NHP8 589 aa14.97□□□□□ -0.01
SCRN3-213ENST00000548921 METTL22Q9BUU2 404 aaPredicted RBP14.97□□□□□ -0.01
SCRN3-213ENST00000548921 USP44Q9H0E7 712 aa14.97□□□□□ -0.01
SCRN3-213ENST00000548921 IBTKQ9P2D0 1353 aaPredicted RBP14.96□□□□□ -0.01
SCRN3-213ENST00000548921 ALDH1L1O75891 902 aa14.96□□□□□ -0.01
SCRN3-213ENST00000548921 HDAC1Q13547 482 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms