RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
TRAFD1-205ENST00000548277 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
TRAFD1-205ENST00000548277 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
TRAFD1-205ENST00000548277 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
TRAFD1-205ENST00000548277 CANXP27824 592 aaKnown RBP16.23■□□□□ 0.19
TRAFD1-205ENST00000548277 MTHFSDQ2M296 383 aaKnown RBP16.23■□□□□ 0.19
TRAFD1-205ENST00000548277 BICDL1Q6ZP65 573 aa16.23■□□□□ 0.19
TRAFD1-205ENST00000548277 RASSF7Q02833 373 aa16.22■□□□□ 0.19
TRAFD1-205ENST00000548277 NFIXQ14938 502 aa16.22■□□□□ 0.19
TRAFD1-205ENST00000548277 AMER1Q5JTC6 1135 aaPredicted RBP16.22■□□□□ 0.19
TRAFD1-205ENST00000548277 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
TRAFD1-205ENST00000548277 WDR90Q96KV7 1748 aa16.22■□□□□ 0.19
TRAFD1-205ENST00000548277 SOS1Q07889 1333 aaPredicted RBP16.21■□□□□ 0.19
TRAFD1-205ENST00000548277 DNAJC5GQ8N7S2 189 aa16.21■□□□□ 0.19
TRAFD1-205ENST00000548277 KDM2BQ8NHM5 1336 aa16.2■□□□□ 0.18
TRAFD1-205ENST00000548277 SERPINB2P05120 415 aa16.2■□□□□ 0.18
TRAFD1-205ENST00000548277 RBM46Q8TBY0 533 aaKnown RBP16.2■□□□□ 0.18
TRAFD1-205ENST00000548277 NARFQ9UHQ1 456 aa16.2■□□□□ 0.18
TRAFD1-205ENST00000548277 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
TRAFD1-205ENST00000548277 CACNA1SQ13698 1873 aa16.19■□□□□ 0.18
TRAFD1-205ENST00000548277 COL15A1P39059 1388 aa16.19■□□□□ 0.18
TRAFD1-205ENST00000548277 DIAPH1O60610 1272 aaKnown RBP16.19■□□□□ 0.18
TRAFD1-205ENST00000548277 BCL2L12Q9HB09 334 aa16.19■□□□□ 0.18
TRAFD1-205ENST00000548277 U2SURPO15042 1029 aaKnown RBP16.18■□□□□ 0.18
TRAFD1-205ENST00000548277 CCDC24Q8N4L8 307 aa16.18■□□□□ 0.18
TRAFD1-205ENST00000548277 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
TRAFD1-205ENST00000548277 KIF7Q2M1P5 1343 aa16.18■□□□□ 0.18
TRAFD1-205ENST00000548277 C2CD5Q86YS7 1000 aa16.17■□□□□ 0.18
TRAFD1-205ENST00000548277 TTC5Q8N0Z6 440 aa16.17■□□□□ 0.18
TRAFD1-205ENST00000548277 DLEC1Q9Y238 1755 aa16.16■□□□□ 0.18
TRAFD1-205ENST00000548277 NRXN2Q9P2S2 1712 aa16.16■□□□□ 0.18
TRAFD1-205ENST00000548277 TNRC6CQ9HCJ0 1690 aaKnown RBP16.15■□□□□ 0.18
TRAFD1-205ENST00000548277 PRELPP51888 382 aa16.15■□□□□ 0.18
TRAFD1-205ENST00000548277 TTLL6Q8N841 843 aa16.15■□□□□ 0.18
TRAFD1-205ENST00000548277 ZNF622Q969S3 477 aaKnown RBP eCLIP16.15■□□□□ 0.18
TRAFD1-205ENST00000548277 TBC1D2BQ9UPU7 963 aa16.15■□□□□ 0.18
TRAFD1-205ENST00000548277 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
TRAFD1-205ENST00000548277 ANKRD31Q8N7Z5 1873 aa16.14■□□□□ 0.17
TRAFD1-205ENST00000548277 H0YIN7 160 aa16.14■□□□□ 0.17
TRAFD1-205ENST00000548277 FSTL1Q12841 308 aa16.14■□□□□ 0.17
TRAFD1-205ENST00000548277 TBC1D9BQ66K14 1250 aa16.14■□□□□ 0.17
TRAFD1-205ENST00000548277 MRC1P22897 1456 aa16.14■□□□□ 0.17
TRAFD1-205ENST00000548277 CARMIL3Q8ND23 1372 aa16.13■□□□□ 0.17
TRAFD1-205ENST00000548277 PER1O15534 1290 aaPredicted RBP16.13■□□□□ 0.17
TRAFD1-205ENST00000548277 STARD3NLO95772 234 aa16.13■□□□□ 0.17
TRAFD1-205ENST00000548277 LMNB1P20700 586 aa16.13■□□□□ 0.17
TRAFD1-205ENST00000548277 TEFQ10587 303 aa16.13■□□□□ 0.17
TRAFD1-205ENST00000548277 VSIG10Q8N0Z9 540 aa16.13■□□□□ 0.17
TRAFD1-205ENST00000548277 IL17REQ8NFR9 667 aa16.13■□□□□ 0.17
TRAFD1-205ENST00000548277 KLRG1Q96E93 195 aa16.13■□□□□ 0.17
TRAFD1-205ENST00000548277 ZNF496Q96IT1 587 aaPredicted RBP16.13■□□□□ 0.17
TRAFD1-205ENST00000548277 TIAM2Q8IVF5 1701 aa16.12■□□□□ 0.17
TRAFD1-205ENST00000548277 A0A087WZG4 1122 aa16.11■□□□□ 0.17
TRAFD1-205ENST00000548277 GNAT3A8MTJ3 354 aa16.11■□□□□ 0.17
TRAFD1-205ENST00000548277 C21orf2O43822 256 aa16.11■□□□□ 0.17
TRAFD1-205ENST00000548277 A1BGP04217 495 aa16.11■□□□□ 0.17
TRAFD1-205ENST00000548277 EIF5P55010 431 aaKnown RBP16.11■□□□□ 0.17
TRAFD1-205ENST00000548277 SMC1BQ8NDV3 1235 aa16.11■□□□□ 0.17
TRAFD1-205ENST00000548277 DICER1Q9UPY3 1922 aaKnown RBP16.11■□□□□ 0.17
TRAFD1-205ENST00000548277 SIPA1L3O60292 1781 aaPredicted RBP16.1■□□□□ 0.17
TRAFD1-205ENST00000548277 GLTPD2A6NH11 291 aa16.1■□□□□ 0.17
TRAFD1-205ENST00000548277 NPHP1O15259 732 aa16.1■□□□□ 0.17
TRAFD1-205ENST00000548277 KCNQ3O43525 872 aa16.1■□□□□ 0.17
TRAFD1-205ENST00000548277 PIP4K2AP48426 406 aaPredicted RBP16.1■□□□□ 0.17
TRAFD1-205ENST00000548277 ZNF790Q6PG37 636 aa16.1■□□□□ 0.17
TRAFD1-205ENST00000548277 NFKBIEO00221 500 aa16.09■□□□□ 0.17
TRAFD1-205ENST00000548277 VEGFAP15692 232 aaPredicted RBP16.09■□□□□ 0.17
TRAFD1-205ENST00000548277 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
TRAFD1-205ENST00000548277 SLX4Q8IY92 1834 aa16.09■□□□□ 0.17
TRAFD1-205ENST00000548277 FER1L6Q2WGJ9 1857 aa16.09■□□□□ 0.17
TRAFD1-205ENST00000548277 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
TRAFD1-205ENST00000548277 COL13A1Q5TAT6 717 aaPredicted RBP16.08■□□□□ 0.16
TRAFD1-205ENST00000548277 PRR5LQ6MZQ0 368 aa16.08■□□□□ 0.16
TRAFD1-205ENST00000548277 GAS2L2Q8NHY3 880 aa16.08■□□□□ 0.16
TRAFD1-205ENST00000548277 COL11A2P13942 1736 aaPredicted RBP16.08■□□□□ 0.16
TRAFD1-205ENST00000548277 CAPN15O75808 1086 aa16.07■□□□□ 0.16
TRAFD1-205ENST00000548277 PDE6BP35913 854 aa16.07■□□□□ 0.16
TRAFD1-205ENST00000548277 PHACTR3Q96KR7 559 aa16.07■□□□□ 0.16
TRAFD1-205ENST00000548277 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
TRAFD1-205ENST00000548277 BTBD11A6QL63 1104 aa16.06■□□□□ 0.16
TRAFD1-205ENST00000548277 ERFEQ4G0M1 354 aa16.06■□□□□ 0.16
TRAFD1-205ENST00000548277 DPY19L2Q6NUT2 758 aa16.06■□□□□ 0.16
TRAFD1-205ENST00000548277 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
TRAFD1-205ENST00000548277 SETDB2Q96T68 719 aa16.06■□□□□ 0.16
TRAFD1-205ENST00000548277 BRIP1Q9BX63 1249 aa16.06■□□□□ 0.16
TRAFD1-205ENST00000548277 USP16Q9Y5T5 823 aa16.06■□□□□ 0.16
TRAFD1-205ENST00000548277 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
TRAFD1-205ENST00000548277 POTECB2RU33 542 aa16.05■□□□□ 0.16
TRAFD1-205ENST00000548277 PRKAR2BP31323 418 aa16.05■□□□□ 0.16
TRAFD1-205ENST00000548277 JMYQ8N9B5 988 aa16.05■□□□□ 0.16
TRAFD1-205ENST00000548277 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
TRAFD1-205ENST00000548277 COL3A1P02461 1466 aaPredicted RBP16.04■□□□□ 0.16
TRAFD1-205ENST00000548277 IL6STP40189 918 aaPredicted RBP16.04■□□□□ 0.16
TRAFD1-205ENST00000548277 DZIP3Q86Y13 1208 aaKnown RBP16.04■□□□□ 0.16
TRAFD1-205ENST00000548277 ZC3H4Q9UPT8 1303 aaKnown RBP16.03■□□□□ 0.16
TRAFD1-205ENST00000548277 FAM177BA6PVY3 158 aa16.03■□□□□ 0.16
TRAFD1-205ENST00000548277 CAMTA2O94983 1202 aa16.03■□□□□ 0.16
TRAFD1-205ENST00000548277 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
TRAFD1-205ENST00000548277 DDNO94850 711 aaPredicted RBP16.02■□□□□ 0.16
TRAFD1-205ENST00000548277 ST5P78524 1137 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms