RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 RNF181Q9P0P0 153 aa27.25■■□□□ 1.95
GATC-202ENST00000548171 FSTL1Q12841 308 aa27.24■■□□□ 1.95
GATC-202ENST00000548171 KCPQ6ZWJ8 1503 aa27.24■■□□□ 1.95
GATC-202ENST00000548171 CYP19A1P11511 503 aaPredicted RBP27.23■■□□□ 1.95
GATC-202ENST00000548171 LGR6Q9HBX8 967 aa27.23■■□□□ 1.95
GATC-202ENST00000548171 AMER1Q5JTC6 1135 aaPredicted RBP27.22■■□□□ 1.95
GATC-202ENST00000548171 NARFQ9UHQ1 456 aa27.22■■□□□ 1.95
GATC-202ENST00000548171 UBR2Q8IWV8 1755 aa27.22■■□□□ 1.95
GATC-202ENST00000548171 ZC3H4Q9UPT8 1303 aaKnown RBP27.21■■□□□ 1.95
GATC-202ENST00000548171 RNMTO43148 476 aaKnown RBP27.21■■□□□ 1.95
GATC-202ENST00000548171 COL15A1P39059 1388 aa27.21■■□□□ 1.95
GATC-202ENST00000548171 VSIG10Q8N0Z9 540 aa27.2■■□□□ 1.94
GATC-202ENST00000548171 SLC39A6Q13433 755 aa27.19■■□□□ 1.94
GATC-202ENST00000548171 NFIXQ14938 502 aa27.19■■□□□ 1.94
GATC-202ENST00000548171 CCDC88AQ3V6T2 1871 aa27.18■■□□□ 1.94
GATC-202ENST00000548171 HMOX1P09601 288 aa27.17■■□□□ 1.94
GATC-202ENST00000548171 ZBTB1Q9Y2K1 713 aa27.17■■□□□ 1.94
GATC-202ENST00000548171 RRAGCQ9HB90 399 aa27.16■■□□□ 1.94
GATC-202ENST00000548171 MTHFSDQ2M296 383 aaKnown RBP27.14■■□□□ 1.94
GATC-202ENST00000548171 KLRG1Q96E93 195 aa27.14■■□□□ 1.94
GATC-202ENST00000548171 DIAPH1O60610 1272 aaKnown RBP27.13■■□□□ 1.93
GATC-202ENST00000548171 SERPINB2P05120 415 aa27.13■■□□□ 1.93
GATC-202ENST00000548171 LMNB1P20700 586 aa27.13■■□□□ 1.93
GATC-202ENST00000548171 BCL2L12Q9HB09 334 aa27.13■■□□□ 1.93
GATC-202ENST00000548171 TIAM2Q8IVF5 1701 aa27.13■■□□□ 1.93
GATC-202ENST00000548171 TTLL6Q8N841 843 aa27.12■■□□□ 1.93
GATC-202ENST00000548171 SMC1BQ8NDV3 1235 aa27.12■■□□□ 1.93
GATC-202ENST00000548171 STARD3NLO95772 234 aa27.11■■□□□ 1.93
GATC-202ENST00000548171 JMYQ8N9B5 988 aa27.11■■□□□ 1.93
GATC-202ENST00000548171 RASSF7Q02833 373 aa27.1■■□□□ 1.93
GATC-202ENST00000548171 TTC5Q8N0Z6 440 aa27.1■■□□□ 1.93
GATC-202ENST00000548171 KIF7Q2M1P5 1343 aa27.1■■□□□ 1.93
GATC-202ENST00000548171 A0A087WZG4 1122 aa27.09■■□□□ 1.93
GATC-202ENST00000548171 H0YIN7 160 aa27.09■■□□□ 1.93
GATC-202ENST00000548171 C2CD5Q86YS7 1000 aa27.09■■□□□ 1.93
GATC-202ENST00000548171 SIPA1L3O60292 1781 aaPredicted RBP27.09■■□□□ 1.93
GATC-202ENST00000548171 GLTPD2A6NH11 291 aa27.08■■□□□ 1.93
GATC-202ENST00000548171 CANXP27824 592 aaKnown RBP27.08■■□□□ 1.93
GATC-202ENST00000548171 EIF5P55010 431 aaKnown RBP27.08■■□□□ 1.93
GATC-202ENST00000548171 ANKRD31Q8N7Z5 1873 aa27.08■■□□□ 1.93
GATC-202ENST00000548171 SCN7AQ01118 1682 aa27.08■■□□□ 1.92
GATC-202ENST00000548171 VEGFAP15692 232 aaPredicted RBP27.07■■□□□ 1.92
GATC-202ENST00000548171 HTRA3P83110 453 aa27.07■■□□□ 1.92
GATC-202ENST00000548171 CCER1Q8TC90 406 aaPredicted RBP27.07■■□□□ 1.92
GATC-202ENST00000548171 PDZRN3Q9UPQ7 1066 aa27.07■■□□□ 1.92
GATC-202ENST00000548171 DICER1Q9UPY3 1922 aaKnown RBP27.07■■□□□ 1.92
GATC-202ENST00000548171 PER1O15534 1290 aaPredicted RBP27.06■■□□□ 1.92
GATC-202ENST00000548171 TEX13AQ9BXU3 409 aaPredicted RBP27.06■■□□□ 1.92
GATC-202ENST00000548171 CARMIL3Q8ND23 1372 aa27.05■■□□□ 1.92
GATC-202ENST00000548171 FER1L6Q2WGJ9 1857 aa27.04■■□□□ 1.92
GATC-202ENST00000548171 PRELPP51888 382 aa27.03■■□□□ 1.92
GATC-202ENST00000548171 TEFQ10587 303 aa27.03■■□□□ 1.92
GATC-202ENST00000548171 CC2D1BQ5T0F9 858 aaKnown RBP27.03■■□□□ 1.92
GATC-202ENST00000548171 BICDL1Q6ZP65 573 aa27.03■■□□□ 1.92
GATC-202ENST00000548171 COL3A1P02461 1466 aaPredicted RBP27.02■■□□□ 1.92
GATC-202ENST00000548171 HEG1Q9ULI3 1381 aa27.02■■□□□ 1.92
GATC-202ENST00000548171 ZNF790Q6PG37 636 aa27.02■■□□□ 1.92
GATC-202ENST00000548171 GAS2L2Q8NHY3 880 aa27.02■■□□□ 1.92
GATC-202ENST00000548171 ZNF496Q96IT1 587 aaPredicted RBP27.02■■□□□ 1.92
GATC-202ENST00000548171 GNAT3A8MTJ3 354 aa27.01■■□□□ 1.91
GATC-202ENST00000548171 PDE6BP35913 854 aa27.01■■□□□ 1.91
GATC-202ENST00000548171 BRIP1Q9BX63 1249 aa27.01■■□□□ 1.91
GATC-202ENST00000548171 NPC1L1Q9UHC9 1359 aa27■■□□□ 1.91
GATC-202ENST00000548171 COL11A2P13942 1736 aaPredicted RBP27■■□□□ 1.91
GATC-202ENST00000548171 NFKBIEO00221 500 aa27■■□□□ 1.91
GATC-202ENST00000548171 IL6STP40189 918 aaPredicted RBP26.99■■□□□ 1.91
GATC-202ENST00000548171 TBC1D9BQ66K14 1250 aa26.99■■□□□ 1.91
GATC-202ENST00000548171 IL17REQ8NFR9 667 aa26.99■■□□□ 1.91
GATC-202ENST00000548171 DPY19L2Q6NUT2 758 aa26.98■■□□□ 1.91
GATC-202ENST00000548171 U2SURPO15042 1029 aaKnown RBP26.97■■□□□ 1.91
GATC-202ENST00000548171 NPM2Q86SE8 214 aaKnown RBP26.97■■□□□ 1.91
GATC-202ENST00000548171 ZNF622Q969S3 477 aaKnown RBP eCLIP26.97■■□□□ 1.91
GATC-202ENST00000548171 BCORQ6W2J9 1755 aa26.97■■□□□ 1.91
GATC-202ENST00000548171 ARFGEF2Q9Y6D5 1785 aa26.97■■□□□ 1.91
GATC-202ENST00000548171 PRR5LQ6MZQ0 368 aa26.96■■□□□ 1.91
GATC-202ENST00000548171 FMNL2Q96PY5 1086 aa26.96■■□□□ 1.91
GATC-202ENST00000548171 TBC1D2BQ9UPU7 963 aa26.96■■□□□ 1.91
GATC-202ENST00000548171 CACNA1SQ13698 1873 aa26.96■■□□□ 1.91
GATC-202ENST00000548171 ZNF330Q9Y3S2 320 aaPredicted RBP26.95■■□□□ 1.9
GATC-202ENST00000548171 SETDB2Q96T68 719 aa26.94■■□□□ 1.9
GATC-202ENST00000548171 CEMIPQ8WUJ3 1361 aa26.94■■□□□ 1.9
GATC-202ENST00000548171 C21orf2O43822 256 aa26.93■■□□□ 1.9
GATC-202ENST00000548171 COL13A1Q5TAT6 717 aaPredicted RBP26.93■■□□□ 1.9
GATC-202ENST00000548171 LTBP3Q9NS15 1303 aa26.92■■□□□ 1.9
GATC-202ENST00000548171 ERFEQ4G0M1 354 aa26.92■■□□□ 1.9
GATC-202ENST00000548171 CNBD1Q8NA66 436 aa26.92■■□□□ 1.9
GATC-202ENST00000548171 CNKSR1Q969H4 720 aa26.92■■□□□ 1.9
GATC-202ENST00000548171 SLX4Q8IY92 1834 aa26.92■■□□□ 1.9
GATC-202ENST00000548171 TAOK3Q9H2K8 898 aa26.91■■□□□ 1.9
GATC-202ENST00000548171 POTECB2RU33 542 aa26.9■■□□□ 1.9
GATC-202ENST00000548171 NPHP1O15259 732 aa26.9■■□□□ 1.9
GATC-202ENST00000548171 CAMTA2O94983 1202 aa26.9■■□□□ 1.9
GATC-202ENST00000548171 ST5P78524 1137 aa26.9■■□□□ 1.9
GATC-202ENST00000548171 A1BGP04217 495 aa26.89■■□□□ 1.9
GATC-202ENST00000548171 SOGA3Q5TF21 947 aa26.89■■□□□ 1.9
GATC-202ENST00000548171 STYK1Q6J9G0 422 aa26.89■■□□□ 1.9
GATC-202ENST00000548171 BTBD11A6QL63 1104 aa26.88■■□□□ 1.89
GATC-202ENST00000548171 CCDC24Q8N4L8 307 aa26.88■■□□□ 1.89
GATC-202ENST00000548171 ZNF219Q9P2Y4 722 aaPredicted RBP26.88■■□□□ 1.89
GATC-202ENST00000548171 SRGNP10124 158 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms