RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 BARGINQ6ZT62 677 aa17.18■□□□□ 0.34
SMPDL3B-205ENST00000548116 FNBP4Q8N3X1 1017 aaPredicted RBP17.18■□□□□ 0.34
SMPDL3B-205ENST00000548116 NGLY1Q96IV0 654 aa17.18■□□□□ 0.34
SMPDL3B-205ENST00000548116 MEIS3Q99687 375 aa17.18■□□□□ 0.34
SMPDL3B-205ENST00000548116 DDX21Q9NR30 783 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMPDL3B-205ENST00000548116 SIRT2Q8IXJ6 389 aa17.17■□□□□ 0.34
SMPDL3B-205ENST00000548116 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
SMPDL3B-205ENST00000548116 TMOD3Q9NYL9 352 aa17.17■□□□□ 0.34
SMPDL3B-205ENST00000548116 ADCY9O60503 1353 aa17.17■□□□□ 0.34
SMPDL3B-205ENST00000548116 VPS72Q15906 364 aa17.16■□□□□ 0.34
SMPDL3B-205ENST00000548116 PIGBQ92521 554 aa17.16■□□□□ 0.34
SMPDL3B-205ENST00000548116 HYPKQ9NX55 129 aa17.16■□□□□ 0.34
SMPDL3B-205ENST00000548116 ATP10DQ9P241 1426 aa17.16■□□□□ 0.34
SMPDL3B-205ENST00000548116 SMC5Q8IY18 1101 aa17.15■□□□□ 0.34
SMPDL3B-205ENST00000548116 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
SMPDL3B-205ENST00000548116 PI4KAP2A4QPH2 592 aa17.15■□□□□ 0.34
SMPDL3B-205ENST00000548116 DDB1Q16531 1140 aa17.15■□□□□ 0.34
SMPDL3B-205ENST00000548116 LRP10Q7Z4F1 713 aa17.15■□□□□ 0.34
SMPDL3B-205ENST00000548116 PI4KAP1Q8N8J0 262 aa17.15■□□□□ 0.34
SMPDL3B-205ENST00000548116 DNAAF4Q8WXU2 420 aa17.14■□□□□ 0.33
SMPDL3B-205ENST00000548116 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
SMPDL3B-205ENST00000548116 BCL9O00512 1426 aa17.14■□□□□ 0.33
SMPDL3B-205ENST00000548116 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.13■□□□□ 0.33
SMPDL3B-205ENST00000548116 BEND3Q5T5X7 828 aa17.13■□□□□ 0.33
SMPDL3B-205ENST00000548116 MARCH10Q8NA82 808 aaPredicted RBP17.13■□□□□ 0.33
SMPDL3B-205ENST00000548116 ASAP1Q9ULH1 1129 aa17.13■□□□□ 0.33
SMPDL3B-205ENST00000548116 PTCD1O75127 700 aaKnown RBP17.12■□□□□ 0.33
SMPDL3B-205ENST00000548116 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
SMPDL3B-205ENST00000548116 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
SMPDL3B-205ENST00000548116 DOT1LQ8TEK3 1739 aa17.12■□□□□ 0.33
SMPDL3B-205ENST00000548116 RGS3P49796 1198 aa17.11■□□□□ 0.33
SMPDL3B-205ENST00000548116 CEP85Q6P2H3 762 aa17.11■□□□□ 0.33
SMPDL3B-205ENST00000548116 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
SMPDL3B-205ENST00000548116 MYL6BP14649 208 aa17.11■□□□□ 0.33
SMPDL3B-205ENST00000548116 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
SMPDL3B-205ENST00000548116 USP44Q9H0E7 712 aa17.11■□□□□ 0.33
SMPDL3B-205ENST00000548116 USP21Q9UK80 565 aa17.11■□□□□ 0.33
SMPDL3B-205ENST00000548116 MAP3K2Q9Y2U5 619 aa17.11■□□□□ 0.33
SMPDL3B-205ENST00000548116 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
SMPDL3B-205ENST00000548116 FAM98CQ17RN3 349 aaKnown RBP17.1■□□□□ 0.33
SMPDL3B-205ENST00000548116 RPAP2Q8IXW5 612 aaPredicted RBP17.1■□□□□ 0.33
SMPDL3B-205ENST00000548116 KAT6BQ8WYB5 2073 aa17.1■□□□□ 0.33
SMPDL3B-205ENST00000548116 NBPF26B4DH59 902 aa17.09■□□□□ 0.33
SMPDL3B-205ENST00000548116 AIMP1Q12904 312 aaKnown RBP17.09■□□□□ 0.33
SMPDL3B-205ENST00000548116 NBPF14Q5TI25 921 aa17.09■□□□□ 0.33
SMPDL3B-205ENST00000548116 NBPF10Q6P3W6 841 aaKnown RBP17.09■□□□□ 0.33
SMPDL3B-205ENST00000548116 NBPF15Q8N660 670 aa17.09■□□□□ 0.33
SMPDL3B-205ENST00000548116 XAGE3Q8WTP9 111 aa17.09■□□□□ 0.33
SMPDL3B-205ENST00000548116 ERBB4Q15303 1308 aa17.09■□□□□ 0.33
SMPDL3B-205ENST00000548116 GNAI3P08754 354 aa17.09■□□□□ 0.33
SMPDL3B-205ENST00000548116 PRIM1P49642 420 aaKnown RBP17.09■□□□□ 0.33
SMPDL3B-205ENST00000548116 COPS6Q7L5N1 327 aa17.09■□□□□ 0.33
SMPDL3B-205ENST00000548116 GNAI2P04899 355 aa17.08■□□□□ 0.33
SMPDL3B-205ENST00000548116 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.33
SMPDL3B-205ENST00000548116 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
SMPDL3B-205ENST00000548116 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.32
SMPDL3B-205ENST00000548116 GCC1Q96CN9 775 aa17.08■□□□□ 0.32
SMPDL3B-205ENST00000548116 NUCB1Q02818 461 aa17.07■□□□□ 0.32
SMPDL3B-205ENST00000548116 A1BGP04217 495 aa17.06■□□□□ 0.32
SMPDL3B-205ENST00000548116 PDE4AP27815 886 aa17.06■□□□□ 0.32
SMPDL3B-205ENST00000548116 MEX3CQ5U5Q3 659 aaKnown RBP17.06■□□□□ 0.32
SMPDL3B-205ENST00000548116 SYTL4Q96C24 671 aaPredicted RBP17.06■□□□□ 0.32
SMPDL3B-205ENST00000548116 SLC4A9Q96Q91 983 aa17.06■□□□□ 0.32
SMPDL3B-205ENST00000548116 DCTPP1Q9H773 170 aa17.06■□□□□ 0.32
SMPDL3B-205ENST00000548116 THSD7AQ9UPZ6 1657 aa17.06■□□□□ 0.32
SMPDL3B-205ENST00000548116 ALDH1L1O75891 902 aa17.06■□□□□ 0.32
SMPDL3B-205ENST00000548116 AFF2P51816 1311 aa17.05■□□□□ 0.32
SMPDL3B-205ENST00000548116 RIC3Q7Z5B4 369 aa17.05■□□□□ 0.32
SMPDL3B-205ENST00000548116 DNAJC10Q8IXB1 793 aa17.05■□□□□ 0.32
SMPDL3B-205ENST00000548116 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
SMPDL3B-205ENST00000548116 LRRFIP2Q9Y608 721 aaKnown RBP17.05■□□□□ 0.32
SMPDL3B-205ENST00000548116 NBPF7P0C2Y1 421 aaPredicted RBP17.04■□□□□ 0.32
SMPDL3B-205ENST00000548116 UBTFL1P0CB47 393 aaPredicted RBP17.04■□□□□ 0.32
SMPDL3B-205ENST00000548116 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
SMPDL3B-205ENST00000548116 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
SMPDL3B-205ENST00000548116 ACSBG1Q96GR2 724 aa17.04■□□□□ 0.32
SMPDL3B-205ENST00000548116 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
SMPDL3B-205ENST00000548116 IGKV5-2P06315 115 aa17.04■□□□□ 0.32
SMPDL3B-205ENST00000548116 CHD1LQ86WJ1 897 aa17.04■□□□□ 0.32
SMPDL3B-205ENST00000548116 BACH2Q9BYV9 841 aa17.04■□□□□ 0.32
SMPDL3B-205ENST00000548116 ARFGEF2Q9Y6D5 1785 aa17.03■□□□□ 0.32
SMPDL3B-205ENST00000548116 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
SMPDL3B-205ENST00000548116 METTL22Q9BUU2 404 aaPredicted RBP17.03■□□□□ 0.32
SMPDL3B-205ENST00000548116 TEX13AQ9BXU3 409 aaPredicted RBP17.03■□□□□ 0.32
SMPDL3B-205ENST00000548116 ATRNO75882 1429 aa17.03■□□□□ 0.32
SMPDL3B-205ENST00000548116 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.32
SMPDL3B-205ENST00000548116 TJP1Q07157 1748 aa17.02■□□□□ 0.31
SMPDL3B-205ENST00000548116 PNMA6EA0A0J9YXQ4 647 aa17.02■□□□□ 0.31
SMPDL3B-205ENST00000548116 ANKRD45Q5TZF3 282 aa17.02■□□□□ 0.31
SMPDL3B-205ENST00000548116 GJD4Q96KN9 370 aaPredicted RBP17.02■□□□□ 0.31
SMPDL3B-205ENST00000548116 LNPKQ9C0E8 428 aa17.02■□□□□ 0.31
SMPDL3B-205ENST00000548116 UTYO14607 1347 aa17.01■□□□□ 0.31
SMPDL3B-205ENST00000548116 TTLL7Q6ZT98 887 aa17.01■□□□□ 0.31
SMPDL3B-205ENST00000548116 PLBD2Q8NHP8 589 aa17.01■□□□□ 0.31
SMPDL3B-205ENST00000548116 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
SMPDL3B-205ENST00000548116 NEURL1BA8MQ27 555 aa17■□□□□ 0.31
SMPDL3B-205ENST00000548116 HMMRO75330 724 aa17■□□□□ 0.31
SMPDL3B-205ENST00000548116 MYD88Q99836 296 aa17■□□□□ 0.31
SMPDL3B-205ENST00000548116 KCNQ2O43526 872 aa17■□□□□ 0.31
SMPDL3B-205ENST00000548116 CYP19A1P11511 503 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms