RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 VIRMAQ69YN4 1812 aaKnown RBP32.91■■■□□ 2.86
PRDM4-202ENST00000547188 VEGFBP49765 207 aa32.89■■■□□ 2.86
PRDM4-202ENST00000547188 TTLL6Q8N841 843 aa32.89■■■□□ 2.86
PRDM4-202ENST00000547188 ANKRD26Q9UPS8 1709 aa32.88■■■□□ 2.85
PRDM4-202ENST00000547188 USPL1Q5W0Q7 1092 aa32.88■■■□□ 2.85
PRDM4-202ENST00000547188 TJP1Q07157 1748 aa32.88■■■□□ 2.85
PRDM4-202ENST00000547188 WBP1LQ9NX94 342 aa32.86■■■□□ 2.85
PRDM4-202ENST00000547188 WASHC2AQ641Q2 1341 aa32.85■■■□□ 2.85
PRDM4-202ENST00000547188 CABP4P57796 275 aa32.85■■■□□ 2.85
PRDM4-202ENST00000547188 MLLT1Q03111 559 aaPredicted RBP32.84■■■□□ 2.85
PRDM4-202ENST00000547188 NRXN2Q9P2S2 1712 aa32.84■■■□□ 2.85
PRDM4-202ENST00000547188 ZPR1O75312 459 aa32.83■■■□□ 2.85
PRDM4-202ENST00000547188 C2CD5Q86YS7 1000 aa32.83■■■□□ 2.85
PRDM4-202ENST00000547188 NFIXQ14938 502 aa32.82■■■□□ 2.84
PRDM4-202ENST00000547188 ERFEQ4G0M1 354 aa32.82■■■□□ 2.84
PRDM4-202ENST00000547188 INTS5Q6P9B9 1019 aaKnown RBP32.82■■■□□ 2.84
PRDM4-202ENST00000547188 PASKQ96RG2 1323 aa32.81■■■□□ 2.84
PRDM4-202ENST00000547188 ZNF219Q9P2Y4 722 aaPredicted RBP32.81■■■□□ 2.84
PRDM4-202ENST00000547188 DDNO94850 711 aaPredicted RBP32.8■■■□□ 2.84
PRDM4-202ENST00000547188 HSPA8P11142 646 aaKnown RBP32.8■■■□□ 2.84
PRDM4-202ENST00000547188 FER1L6Q2WGJ9 1857 aa32.8■■■□□ 2.84
PRDM4-202ENST00000547188 CCDC85CA6NKD9 419 aa32.78■■■□□ 2.84
PRDM4-202ENST00000547188 HSP90AB1P08238 724 aaKnown RBP32.78■■■□□ 2.84
PRDM4-202ENST00000547188 CARMIL3Q8ND23 1372 aa32.77■■■□□ 2.84
PRDM4-202ENST00000547188 SERPINB2P05120 415 aa32.76■■■□□ 2.83
PRDM4-202ENST00000547188 CARD14Q9BXL6 1004 aa32.76■■■□□ 2.83
PRDM4-202ENST00000547188 TMEM88BA6NKF7 163 aa32.75■■■□□ 2.83
PRDM4-202ENST00000547188 H0YIN7 160 aa32.75■■■□□ 2.83
PRDM4-202ENST00000547188 EIF4A2Q14240 407 aaKnown RBP32.75■■■□□ 2.83
PRDM4-202ENST00000547188 ZNF530Q6P9A1 599 aaPredicted RBP32.74■■■□□ 2.83
PRDM4-202ENST00000547188 NFATC2IPQ8NCF5 419 aa32.74■■■□□ 2.83
PRDM4-202ENST00000547188 C21orf2O43822 256 aa32.73■■■□□ 2.83
PRDM4-202ENST00000547188 SLC24A1O60721 1099 aa32.72■■■□□ 2.83
PRDM4-202ENST00000547188 SOS1Q07889 1333 aaPredicted RBP32.72■■■□□ 2.83
PRDM4-202ENST00000547188 DNAJC10Q8IXB1 793 aa32.71■■■□□ 2.83
PRDM4-202ENST00000547188 POLKQ9UBT6 870 aa32.71■■■□□ 2.83
PRDM4-202ENST00000547188 ANKRD31Q8N7Z5 1873 aa32.71■■■□□ 2.83
PRDM4-202ENST00000547188 RGS19P49795 217 aa32.7■■■□□ 2.83
PRDM4-202ENST00000547188 PLEKHO1Q53GL0 409 aaPredicted RBP32.7■■■□□ 2.83
PRDM4-202ENST00000547188 LDHDQ86WU2 507 aa32.7■■■□□ 2.83
PRDM4-202ENST00000547188 ZNF622Q969S3 477 aaKnown RBP eCLIP32.7■■■□□ 2.83
PRDM4-202ENST00000547188 BCL2L12Q9HB09 334 aa32.7■■■□□ 2.83
PRDM4-202ENST00000547188 MTHFSP49914 203 aa32.69■■■□□ 2.82
PRDM4-202ENST00000547188 NARFQ9UHQ1 456 aa32.69■■■□□ 2.82
PRDM4-202ENST00000547188 SCN4AP35499 1836 aa32.68■■■□□ 2.82
PRDM4-202ENST00000547188 CACNA1SQ13698 1873 aa32.68■■■□□ 2.82
PRDM4-202ENST00000547188 ITGBL1O95965 494 aaPredicted RBP32.68■■■□□ 2.82
PRDM4-202ENST00000547188 TAF1DQ9H5J8 278 aaPredicted RBP32.66■■■□□ 2.82
PRDM4-202ENST00000547188 COL11A2P13942 1736 aaPredicted RBP32.65■■■□□ 2.82
PRDM4-202ENST00000547188 DEFB115Q30KQ5 88 aa32.65■■■□□ 2.82
PRDM4-202ENST00000547188 BICDL1Q6ZP65 573 aa32.65■■■□□ 2.82
PRDM4-202ENST00000547188 COL15A1P39059 1388 aa32.64■■■□□ 2.82
PRDM4-202ENST00000547188 EAPPQ56P03 285 aaPredicted RBP32.64■■■□□ 2.82
PRDM4-202ENST00000547188 TAOK3Q9H2K8 898 aa32.64■■■□□ 2.82
PRDM4-202ENST00000547188 IQCA1LA6NCM1 817 aa32.63■■■□□ 2.81
PRDM4-202ENST00000547188 WDR33Q9C0J8 1336 aaKnown RBP32.62■■■□□ 2.81
PRDM4-202ENST00000547188 MAP2K1Q02750 393 aaPredicted RBP32.62■■■□□ 2.81
PRDM4-202ENST00000547188 CCDC24Q8N4L8 307 aa32.62■■■□□ 2.81
PRDM4-202ENST00000547188 SLX4Q8IY92 1834 aa32.61■■■□□ 2.81
PRDM4-202ENST00000547188 RASSF10A6NK89 507 aa32.61■■■□□ 2.81
PRDM4-202ENST00000547188 TNNT2P45379 298 aaPredicted RBP32.61■■■□□ 2.81
PRDM4-202ENST00000547188 CLEC11AQ9Y240 323 aa32.61■■■□□ 2.81
PRDM4-202ENST00000547188 SCN11AQ9UI33 1791 aa32.6■■■□□ 2.81
PRDM4-202ENST00000547188 LTBP3Q9NS15 1303 aa32.6■■■□□ 2.81
PRDM4-202ENST00000547188 CYP19A1P11511 503 aaPredicted RBP32.6■■■□□ 2.81
PRDM4-202ENST00000547188 C1orf141Q5JVX7 400 aa32.6■■■□□ 2.81
PRDM4-202ENST00000547188 ZBTB1Q9Y2K1 713 aa32.6■■■□□ 2.81
PRDM4-202ENST00000547188 AMOTQ4VCS5 1084 aa32.59■■■□□ 2.81
PRDM4-202ENST00000547188 L3MBTL3Q96JM7 780 aaPredicted RBP32.58■■■□□ 2.81
PRDM4-202ENST00000547188 CFAP44Q96MT7 982 aa32.58■■■□□ 2.81
PRDM4-202ENST00000547188 ADAMTSL1Q8N6G6 1762 aa32.56■■■□□ 2.8
PRDM4-202ENST00000547188 ABT1Q9ULW3 272 aaKnown RBP32.55■■■□□ 2.8
PRDM4-202ENST00000547188 PDE4DIPQ5VU43 2346 aa32.55■■■□□ 2.8
PRDM4-202ENST00000547188 MAP1SQ66K74 1059 aaPredicted RBP32.54■■■□□ 2.8
PRDM4-202ENST00000547188 PDE6BP35913 854 aa32.53■■■□□ 2.8
PRDM4-202ENST00000547188 AEBP1Q8IUX7 1158 aa32.53■■■□□ 2.8
PRDM4-202ENST00000547188 TNRC18O15417 2968 aaPredicted RBP32.53■■■□□ 2.8
PRDM4-202ENST00000547188 SLC39A6Q13433 755 aa32.52■■■□□ 2.8
PRDM4-202ENST00000547188 BRIP1Q9BX63 1249 aa32.52■■■□□ 2.8
PRDM4-202ENST00000547188 TSKSQ9UJT2 592 aa32.52■■■□□ 2.8
PRDM4-202ENST00000547188 TBC1D9BQ66K14 1250 aa32.51■■■□□ 2.79
PRDM4-202ENST00000547188 CNTROBQ8N137 903 aa32.51■■■□□ 2.79
PRDM4-202ENST00000547188 CANXP27824 592 aaKnown RBP32.5■■■□□ 2.79
PRDM4-202ENST00000547188 HACL1Q9UJ83 578 aa32.5■■■□□ 2.79
PRDM4-202ENST00000547188 ZNF541Q9H0D2 1346 aa32.5■■■□□ 2.79
PRDM4-202ENST00000547188 PRR5LQ6MZQ0 368 aa32.49■■■□□ 2.79
PRDM4-202ENST00000547188 EPHX2P34913 555 aa32.48■■■□□ 2.79
PRDM4-202ENST00000547188 GRM1Q13255 1194 aa32.48■■■□□ 2.79
PRDM4-202ENST00000547188 CDCA8Q53HL2 280 aa32.48■■■□□ 2.79
PRDM4-202ENST00000547188 PRPF40BQ6NWY9 871 aaKnown RBP32.48■■■□□ 2.79
PRDM4-202ENST00000547188 PAXIP1Q6ZW49 1069 aaPredicted RBP32.48■■■□□ 2.79
PRDM4-202ENST00000547188 BEGAINQ9BUH8 593 aa32.48■■■□□ 2.79
PRDM4-202ENST00000547188 PDZRN3Q9UPQ7 1066 aa32.48■■■□□ 2.79
PRDM4-202ENST00000547188 THSD7BQ9C0I4 1608 aa32.48■■■□□ 2.79
PRDM4-202ENST00000547188 ARFGEF2Q9Y6D5 1785 aa32.47■■■□□ 2.79
PRDM4-202ENST00000547188 CASP8AP2Q9UKL3 1982 aa32.47■■■□□ 2.79
PRDM4-202ENST00000547188 CNKSR1Q969H4 720 aa32.45■■■□□ 2.79
PRDM4-202ENST00000547188 SLC52A2Q9HAB3 445 aa32.45■■■□□ 2.79
PRDM4-202ENST00000547188 CAPNS2Q96L46 248 aa32.44■■■□□ 2.78
PRDM4-202ENST00000547188 LGR6Q9HBX8 967 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms