RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 DDR1Q08345 913 aa19.24■□□□□ 0.67
COL2A1-209ENST00000546974 USPL1Q5W0Q7 1092 aa19.24■□□□□ 0.67
COL2A1-209ENST00000546974 ZNF790Q6PG37 636 aa19.24■□□□□ 0.67
COL2A1-209ENST00000546974 NARFQ9UHQ1 456 aa19.24■□□□□ 0.67
COL2A1-209ENST00000546974 ADCY9O60503 1353 aa19.23■□□□□ 0.67
COL2A1-209ENST00000546974 FCHSD2O94868 740 aa19.23■□□□□ 0.67
COL2A1-209ENST00000546974 STARD3NLO95772 234 aa19.23■□□□□ 0.67
COL2A1-209ENST00000546974 U2AF1L5P0DN76 240 aaPredicted RBP19.23■□□□□ 0.67
COL2A1-209ENST00000546974 U2AF1Q01081 240 aaKnown RBP eCLIP19.23■□□□□ 0.67
COL2A1-209ENST00000546974 TEX13AQ9BXU3 409 aaPredicted RBP19.23■□□□□ 0.67
COL2A1-209ENST00000546974 ATP10DQ9P241 1426 aa19.23■□□□□ 0.67
COL2A1-209ENST00000546974 HEG1Q9ULI3 1381 aa19.22■□□□□ 0.67
COL2A1-209ENST00000546974 POLRMTO00411 1230 aaKnown RBP19.22■□□□□ 0.67
COL2A1-209ENST00000546974 ZNF496Q96IT1 587 aaPredicted RBP19.22■□□□□ 0.67
COL2A1-209ENST00000546974 BCS1LQ9Y276 419 aa19.22■□□□□ 0.67
COL2A1-209ENST00000546974 KCNA3P22001 575 aa19.21■□□□□ 0.67
COL2A1-209ENST00000546974 CANXP27824 592 aaKnown RBP19.2■□□□□ 0.66
COL2A1-209ENST00000546974 EIF5P55010 431 aaKnown RBP19.2■□□□□ 0.66
COL2A1-209ENST00000546974 FMNL2Q96PY5 1086 aa19.2■□□□□ 0.66
COL2A1-209ENST00000546974 AFDNP55196 1824 aaKnown RBP19.2■□□□□ 0.66
COL2A1-209ENST00000546974 ARFGEF1Q9Y6D6 1849 aa19.2■□□□□ 0.66
COL2A1-209ENST00000546974 BTBD11A6QL63 1104 aa19.19■□□□□ 0.66
COL2A1-209ENST00000546974 RTF1Q92541 710 aaKnown RBP19.19■□□□□ 0.66
COL2A1-209ENST00000546974 BCL2L12Q9HB09 334 aa19.19■□□□□ 0.66
COL2A1-209ENST00000546974 PIM2Q9P1W9 311 aa19.19■□□□□ 0.66
COL2A1-209ENST00000546974 A0A087WZG4 1122 aa19.18■□□□□ 0.66
COL2A1-209ENST00000546974 NFIXQ14938 502 aa19.18■□□□□ 0.66
COL2A1-209ENST00000546974 GPBP1L1Q9HC44 474 aaPredicted RBP19.18■□□□□ 0.66
COL2A1-209ENST00000546974 NRXN2Q9P2S2 1712 aa19.17■□□□□ 0.66
COL2A1-209ENST00000546974 HTATSF1O43719 755 aaKnown RBP19.16■□□□□ 0.66
COL2A1-209ENST00000546974 IL6STP40189 918 aaPredicted RBP19.16■□□□□ 0.66
COL2A1-209ENST00000546974 ARHGAP27Q6ZUM4 889 aa19.16■□□□□ 0.66
COL2A1-209ENST00000546974 KCNQ3O43525 872 aa19.15■□□□□ 0.66
COL2A1-209ENST00000546974 DALRD3Q5D0E6 543 aaKnown RBP19.15■□□□□ 0.66
COL2A1-209ENST00000546974 MCM10Q7L590 875 aa19.15■□□□□ 0.66
COL2A1-209ENST00000546974 SENP3-EIF4A1A0A087X0R7 540 aa19.14■□□□□ 0.65
COL2A1-209ENST00000546974 SERPINB2P05120 415 aa19.14■□□□□ 0.65
COL2A1-209ENST00000546974 CHRNA5P30532 468 aa19.13■□□□□ 0.65
COL2A1-209ENST00000546974 ZNF526Q8TF50 670 aaPredicted RBP19.13■□□□□ 0.65
COL2A1-209ENST00000546974 A1BGP04217 495 aa19.12■□□□□ 0.65
COL2A1-209ENST00000546974 NEFMP07197 916 aa19.12■□□□□ 0.65
COL2A1-209ENST00000546974 DLG5Q8TDM6 1919 aa19.12■□□□□ 0.65
COL2A1-209ENST00000546974 SCN7AQ01118 1682 aa19.11■□□□□ 0.65
COL2A1-209ENST00000546974 DCTN1Q14203 1278 aa19.11■□□□□ 0.65
COL2A1-209ENST00000546974 NPM2Q86SE8 214 aaKnown RBP19.11■□□□□ 0.65
COL2A1-209ENST00000546974 TBC1D2BQ9UPU7 963 aa19.11■□□□□ 0.65
COL2A1-209ENST00000546974 ZNF330Q9Y3S2 320 aaPredicted RBP19.11■□□□□ 0.65
COL2A1-209ENST00000546974 USP16Q9Y5T5 823 aa19.11■□□□□ 0.65
COL2A1-209ENST00000546974 CEP350Q5VT06 3117 aa19.11■□□□□ 0.65
COL2A1-209ENST00000546974 SNRPA1P09661 255 aaKnown RBP19.1■□□□□ 0.65
COL2A1-209ENST00000546974 TAF7Q15545 349 aaPredicted RBP19.1■□□□□ 0.65
COL2A1-209ENST00000546974 TBC1D9BQ66K14 1250 aa19.1■□□□□ 0.65
COL2A1-209ENST00000546974 BICDL1Q6ZP65 573 aa19.1■□□□□ 0.65
COL2A1-209ENST00000546974 DLEC1Q9Y238 1755 aa19.09■□□□□ 0.65
COL2A1-209ENST00000546974 PLEKHF1Q96S99 279 aa19.09■□□□□ 0.65
COL2A1-209ENST00000546974 SBF1O95248 1867 aa19.08■□□□□ 0.65
COL2A1-209ENST00000546974 PNNQ9H307 717 aaKnown RBP19.08■□□□□ 0.64
COL2A1-209ENST00000546974 PRAMEF22A3QJZ6 481 aa19.07■□□□□ 0.64
COL2A1-209ENST00000546974 CAMTA2O94983 1202 aa19.07■□□□□ 0.64
COL2A1-209ENST00000546974 RALBP1Q15311 655 aa19.07■□□□□ 0.64
COL2A1-209ENST00000546974 C9orf131Q5VYM1 1079 aa19.07■□□□□ 0.64
COL2A1-209ENST00000546974 BCORQ6W2J9 1755 aa19.06■□□□□ 0.64
COL2A1-209ENST00000546974 H0YIN7 160 aa19.06■□□□□ 0.64
COL2A1-209ENST00000546974 KIF3CO14782 793 aa19.06■□□□□ 0.64
COL2A1-209ENST00000546974 DZIP3Q86Y13 1208 aaKnown RBP19.06■□□□□ 0.64
COL2A1-209ENST00000546974 C2CD5Q86YS7 1000 aa19.06■□□□□ 0.64
COL2A1-209ENST00000546974 PDZRN3Q9UPQ7 1066 aa19.06■□□□□ 0.64
COL2A1-209ENST00000546974 CARMIL3Q8ND23 1372 aa19.06■□□□□ 0.64
COL2A1-209ENST00000546974 ANKRD31Q8N7Z5 1873 aa19.05■□□□□ 0.64
COL2A1-209ENST00000546974 NFE2L2Q16236 605 aa19.05■□□□□ 0.64
COL2A1-209ENST00000546974 TTLL6Q8N841 843 aa19.05■□□□□ 0.64
COL2A1-209ENST00000546974 PNISRQ8TF01 805 aaKnown RBP19.05■□□□□ 0.64
COL2A1-209ENST00000546974 SETDB2Q96T68 719 aa19.05■□□□□ 0.64
COL2A1-209ENST00000546974 PRR5LQ6MZQ0 368 aa19.04■□□□□ 0.64
COL2A1-209ENST00000546974 CLEC4GQ6UXB4 293 aa19.04■□□□□ 0.64
COL2A1-209ENST00000546974 BRIP1Q9BX63 1249 aa19.04■□□□□ 0.64
COL2A1-209ENST00000546974 PDE6BP35913 854 aa19.03■□□□□ 0.64
COL2A1-209ENST00000546974 PIP4K2AP48426 406 aaPredicted RBP19.03■□□□□ 0.64
COL2A1-209ENST00000546974 MIS18AQ9NYP9 233 aa19.03■□□□□ 0.64
COL2A1-209ENST00000546974 KDM3BQ7LBC6 1761 aa19.03■□□□□ 0.64
COL2A1-209ENST00000546974 MAPK8IP3Q9UPT6 1336 aa19.02■□□□□ 0.64
COL2A1-209ENST00000546974 RNF181Q9P0P0 153 aa19.02■□□□□ 0.64
COL2A1-209ENST00000546974 LAMB4A4D0S4 1761 aa19.01■□□□□ 0.63
COL2A1-209ENST00000546974 NBPF26B4DH59 902 aa19.01■□□□□ 0.63
COL2A1-209ENST00000546974 RGL2O15211 777 aa19.01■□□□□ 0.63
COL2A1-209ENST00000546974 NBPF10Q6P3W6 841 aaKnown RBP19.01■□□□□ 0.63
COL2A1-209ENST00000546974 NBPF15Q8N660 670 aa19.01■□□□□ 0.63
COL2A1-209ENST00000546974 CNBD1Q8NA66 436 aa19.01■□□□□ 0.63
COL2A1-209ENST00000546974 ZNF652Q9Y2D9 606 aa19.01■□□□□ 0.63
COL2A1-209ENST00000546974 DDX10Q13206 875 aaKnown RBP19■□□□□ 0.63
COL2A1-209ENST00000546974 CCDC88AQ3V6T2 1871 aa19■□□□□ 0.63
COL2A1-209ENST00000546974 NPHP1O15259 732 aa18.99■□□□□ 0.63
COL2A1-209ENST00000546974 HSPA6P17066 643 aa18.99■□□□□ 0.63
COL2A1-209ENST00000546974 ST5P78524 1137 aa18.99■□□□□ 0.63
COL2A1-209ENST00000546974 CCDC24Q8N4L8 307 aa18.99■□□□□ 0.63
COL2A1-209ENST00000546974 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL2A1-209ENST00000546974 COL11A2P13942 1736 aaPredicted RBP18.98■□□□□ 0.63
COL2A1-209ENST00000546974 TOMM70O94826 608 aa18.98■□□□□ 0.63
COL2A1-209ENST00000546974 EIF4A1P60842 406 aaKnown RBP18.98■□□□□ 0.63
COL2A1-209ENST00000546974 RASSF7Q02833 373 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms