RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 ZBTB1Q9Y2K1 713 aa15.49■□□□□ 0.07
RAB5C-203ENST00000546881 ADAMTS7Q9UKP4 1686 aa15.48■□□□□ 0.07
RAB5C-203ENST00000546881 ARFGEF1Q9Y6D6 1849 aa15.48■□□□□ 0.07
RAB5C-203ENST00000546881 PER1O15534 1290 aaPredicted RBP15.48■□□□□ 0.07
RAB5C-203ENST00000546881 TOMM70O94826 608 aa15.48■□□□□ 0.07
RAB5C-203ENST00000546881 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
RAB5C-203ENST00000546881 RNF181Q9P0P0 153 aa15.48■□□□□ 0.07
RAB5C-203ENST00000546881 NFIXQ14938 502 aa15.47■□□□□ 0.07
RAB5C-203ENST00000546881 C16orf71Q8IYS4 520 aaPredicted RBP15.47■□□□□ 0.07
RAB5C-203ENST00000546881 NARFQ9UHQ1 456 aa15.47■□□□□ 0.07
RAB5C-203ENST00000546881 CEP350Q5VT06 3117 aa15.46■□□□□ 0.07
RAB5C-203ENST00000546881 TEFQ10587 303 aa15.46■□□□□ 0.07
RAB5C-203ENST00000546881 BICDL1Q6ZP65 573 aa15.46■□□□□ 0.07
RAB5C-203ENST00000546881 ZNF330Q9Y3S2 320 aaPredicted RBP15.46■□□□□ 0.07
RAB5C-203ENST00000546881 STARD3NLO95772 234 aa15.45■□□□□ 0.06
RAB5C-203ENST00000546881 SERPINB2P05120 415 aa15.45■□□□□ 0.06
RAB5C-203ENST00000546881 APLP1P51693 650 aa15.45■□□□□ 0.06
RAB5C-203ENST00000546881 VSIG10Q8N0Z9 540 aa15.45■□□□□ 0.06
RAB5C-203ENST00000546881 KDM2BQ8NHM5 1336 aa15.44■□□□□ 0.06
RAB5C-203ENST00000546881 BCL2L12Q9HB09 334 aa15.44■□□□□ 0.06
RAB5C-203ENST00000546881 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
RAB5C-203ENST00000546881 GNAT3A8MTJ3 354 aa15.43■□□□□ 0.06
RAB5C-203ENST00000546881 RASSF7Q02833 373 aa15.43■□□□□ 0.06
RAB5C-203ENST00000546881 IFFO2Q5TF58 517 aa15.43■□□□□ 0.06
RAB5C-203ENST00000546881 GAS2L2Q8NHY3 880 aa15.43■□□□□ 0.06
RAB5C-203ENST00000546881 COL3A1P02461 1466 aaPredicted RBP15.43■□□□□ 0.06
RAB5C-203ENST00000546881 UBR2Q8IWV8 1755 aa15.43■□□□□ 0.06
RAB5C-203ENST00000546881 A0A087WZG4 1122 aa15.42■□□□□ 0.06
RAB5C-203ENST00000546881 C2CD5Q86YS7 1000 aa15.42■□□□□ 0.06
RAB5C-203ENST00000546881 ZNF496Q96IT1 587 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-203ENST00000546881 RRAGCQ9HB90 399 aa15.42■□□□□ 0.06
RAB5C-203ENST00000546881 ZNF790Q6PG37 636 aa15.41■□□□□ 0.06
RAB5C-203ENST00000546881 IL17REQ8NFR9 667 aa15.41■□□□□ 0.06
RAB5C-203ENST00000546881 RBM46Q8TBY0 533 aaKnown RBP15.41■□□□□ 0.06
RAB5C-203ENST00000546881 CARMIL3Q8ND23 1372 aa15.4■□□□□ 0.06
RAB5C-203ENST00000546881 HEG1Q9ULI3 1381 aa15.4■□□□□ 0.06
RAB5C-203ENST00000546881 H0YIN7 160 aa15.4■□□□□ 0.06
RAB5C-203ENST00000546881 EIF5P55010 431 aaKnown RBP15.4■□□□□ 0.06
RAB5C-203ENST00000546881 NPM2Q86SE8 214 aaKnown RBP15.4■□□□□ 0.06
RAB5C-203ENST00000546881 TTLL6Q8N841 843 aa15.4■□□□□ 0.06
RAB5C-203ENST00000546881 TBC1D2BQ9UPU7 963 aa15.4■□□□□ 0.06
RAB5C-203ENST00000546881 NRXN2Q9P2S2 1712 aa15.4■□□□□ 0.06
RAB5C-203ENST00000546881 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
RAB5C-203ENST00000546881 PRKAR2BP31323 418 aa15.39■□□□□ 0.05
RAB5C-203ENST00000546881 TBC1D9BQ66K14 1250 aa15.39■□□□□ 0.05
RAB5C-203ENST00000546881 CCDC24Q8N4L8 307 aa15.39■□□□□ 0.05
RAB5C-203ENST00000546881 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
RAB5C-203ENST00000546881 TEX13AQ9BXU3 409 aaPredicted RBP15.39■□□□□ 0.05
RAB5C-203ENST00000546881 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
RAB5C-203ENST00000546881 SBF1O95248 1867 aa15.38■□□□□ 0.05
RAB5C-203ENST00000546881 NPHP1O15259 732 aa15.38■□□□□ 0.05
RAB5C-203ENST00000546881 LMNB1P20700 586 aa15.38■□□□□ 0.05
RAB5C-203ENST00000546881 HTRA3P83110 453 aa15.38■□□□□ 0.05
RAB5C-203ENST00000546881 ZNF622Q969S3 477 aaKnown RBP eCLIP15.38■□□□□ 0.05
RAB5C-203ENST00000546881 FMNL2Q96PY5 1086 aa15.38■□□□□ 0.05
RAB5C-203ENST00000546881 DLEC1Q9Y238 1755 aa15.38■□□□□ 0.05
RAB5C-203ENST00000546881 BTBD11A6QL63 1104 aa15.37■□□□□ 0.05
RAB5C-203ENST00000546881 A1BGP04217 495 aa15.37■□□□□ 0.05
RAB5C-203ENST00000546881 PHACTR3Q96KR7 559 aa15.37■□□□□ 0.05
RAB5C-203ENST00000546881 TNRC6CQ9HCJ0 1690 aaKnown RBP15.37■□□□□ 0.05
RAB5C-203ENST00000546881 WDR90Q96KV7 1748 aa15.37■□□□□ 0.05
RAB5C-203ENST00000546881 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
RAB5C-203ENST00000546881 SCN7AQ01118 1682 aa15.36■□□□□ 0.05
RAB5C-203ENST00000546881 KCNQ3O43525 872 aa15.36■□□□□ 0.05
RAB5C-203ENST00000546881 FSTL1Q12841 308 aa15.36■□□□□ 0.05
RAB5C-203ENST00000546881 PDE6BP35913 854 aa15.35■□□□□ 0.05
RAB5C-203ENST00000546881 IL6STP40189 918 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-203ENST00000546881 PIP4K2AP48426 406 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-203ENST00000546881 PRELPP51888 382 aa15.35■□□□□ 0.05
RAB5C-203ENST00000546881 PRR5LQ6MZQ0 368 aa15.35■□□□□ 0.05
RAB5C-203ENST00000546881 DNAJC5GQ8N7S2 189 aa15.35■□□□□ 0.05
RAB5C-203ENST00000546881 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
RAB5C-203ENST00000546881 NUDCQ9Y266 331 aa15.35■□□□□ 0.05
RAB5C-203ENST00000546881 NFKBIEO00221 500 aa15.34■□□□□ 0.05
RAB5C-203ENST00000546881 C21orf2O43822 256 aa15.34■□□□□ 0.05
RAB5C-203ENST00000546881 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
RAB5C-203ENST00000546881 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.05
RAB5C-203ENST00000546881 SMC1BQ8NDV3 1235 aa15.34■□□□□ 0.05
RAB5C-203ENST00000546881 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
RAB5C-203ENST00000546881 SETDB2Q96T68 719 aa15.34■□□□□ 0.05
RAB5C-203ENST00000546881 BRIP1Q9BX63 1249 aa15.34■□□□□ 0.05
RAB5C-203ENST00000546881 ZC3H4Q9UPT8 1303 aaKnown RBP15.34■□□□□ 0.05
RAB5C-203ENST00000546881 CEMIPQ8WUJ3 1361 aa15.34■□□□□ 0.05
RAB5C-203ENST00000546881 TIAM2Q8IVF5 1701 aa15.34■□□□□ 0.05
RAB5C-203ENST00000546881 GLTPD2A6NH11 291 aa15.33■□□□□ 0.04
RAB5C-203ENST00000546881 MCM10Q7L590 875 aa15.33■□□□□ 0.04
RAB5C-203ENST00000546881 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
RAB5C-203ENST00000546881 CNBD1Q8NA66 436 aa15.33■□□□□ 0.04
RAB5C-203ENST00000546881 ANKRD31Q8N7Z5 1873 aa15.33■□□□□ 0.04
RAB5C-203ENST00000546881 CAMTA2O94983 1202 aa15.32■□□□□ 0.04
RAB5C-203ENST00000546881 ST5P78524 1137 aa15.32■□□□□ 0.04
RAB5C-203ENST00000546881 USP16Q9Y5T5 823 aa15.32■□□□□ 0.04
RAB5C-203ENST00000546881 COL11A2P13942 1736 aaPredicted RBP15.31■□□□□ 0.04
RAB5C-203ENST00000546881 CCDC88AQ3V6T2 1871 aa15.31■□□□□ 0.04
RAB5C-203ENST00000546881 PRAMEF22A3QJZ6 481 aa15.31■□□□□ 0.04
RAB5C-203ENST00000546881 VEGFAP15692 232 aaPredicted RBP15.31■□□□□ 0.04
RAB5C-203ENST00000546881 PPP2R1AP30153 589 aa15.31■□□□□ 0.04
RAB5C-203ENST00000546881 KLRG1Q96E93 195 aa15.31■□□□□ 0.04
RAB5C-203ENST00000546881 PDZRN3Q9UPQ7 1066 aa15.31■□□□□ 0.04
RAB5C-203ENST00000546881 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms