RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 SNRKQ9NRH2 765 aa14.04□□□□□ -0.16
CHERP-203ENST00000546361 U3KPZ7 1027 aaPredicted RBP14.04□□□□□ -0.16
CHERP-203ENST00000546361 NEO1Q92859 1461 aa14.04□□□□□ -0.16
CHERP-203ENST00000546361 ADCY10Q96PN6 1610 aa14.04□□□□□ -0.16
CHERP-203ENST00000546361 PER1O15534 1290 aaPredicted RBP14.04□□□□□ -0.16
CHERP-203ENST00000546361 NAPBQ9H115 298 aa14.04□□□□□ -0.16
CHERP-203ENST00000546361 ECHDC1Q9NTX5 307 aa14.04□□□□□ -0.16
CHERP-203ENST00000546361 PDRG1Q9NUG6 133 aa14.04□□□□□ -0.16
CHERP-203ENST00000546361 KINO60870 393 aaKnown RBP14.04□□□□□ -0.16
CHERP-203ENST00000546361 SOGA3Q5TF21 947 aa14.04□□□□□ -0.16
CHERP-203ENST00000546361 DCAF5Q96JK2 942 aa14.04□□□□□ -0.16
CHERP-203ENST00000546361 POLR3DP05423 398 aaPredicted RBP14.03□□□□□ -0.16
CHERP-203ENST00000546361 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
CHERP-203ENST00000546361 TMEM2Q9UHN6 1383 aa14.03□□□□□ -0.16
CHERP-203ENST00000546361 TRPM2O94759 1503 aa14.03□□□□□ -0.16
CHERP-203ENST00000546361 SKAP1Q86WV1 359 aa14.03□□□□□ -0.16
CHERP-203ENST00000546361 ZNF622Q969S3 477 aaKnown RBP eCLIP14.03□□□□□ -0.165e-7■□□□□ 11.1
CHERP-203ENST00000546361 MEIS3Q99687 375 aa14.03□□□□□ -0.16
CHERP-203ENST00000546361 NFKBIBQ15653 356 aa14.03□□□□□ -0.16
CHERP-203ENST00000546361 SETDB2Q96T68 719 aa14.03□□□□□ -0.16
CHERP-203ENST00000546361 MKNK2Q9HBH9 465 aa14.03□□□□□ -0.16
CHERP-203ENST00000546361 CFAP65Q6ZU64 1925 aaKnown RBP14.03□□□□□ -0.16
CHERP-203ENST00000546361 CDC42BPAQ5VT25 1732 aa14.02□□□□□ -0.16
CHERP-203ENST00000546361 ARHGAP45Q92619 1136 aa14.02□□□□□ -0.16
CHERP-203ENST00000546361 R3HCC1Q9Y3T6 440 aaKnown RBP14.02□□□□□ -0.16
CHERP-203ENST00000546361 YEATS2Q9ULM3 1422 aa14.02□□□□□ -0.16
CHERP-203ENST00000546361 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.16
CHERP-203ENST00000546361 ABCC1P33527 1531 aa14.02□□□□□ -0.17
CHERP-203ENST00000546361 TTC37Q6PGP7 1564 aa14.02□□□□□ -0.17
CHERP-203ENST00000546361 K7ELQ4 463 aaPredicted RBP14.02□□□□□ -0.17
CHERP-203ENST00000546361 PRPF40AO75400 957 aaKnown RBP14.02□□□□□ -0.17
CHERP-203ENST00000546361 TXLNAP40222 546 aa14.02□□□□□ -0.17
CHERP-203ENST00000546361 CRACR2BQ8N4Y2 399 aaPredicted RBP14.02□□□□□ -0.17
CHERP-203ENST00000546361 JMYQ8N9B5 988 aa14.02□□□□□ -0.17
CHERP-203ENST00000546361 ZNF396Q96N95 335 aaPredicted RBP14.02□□□□□ -0.17
CHERP-203ENST00000546361 KRT24Q2M2I5 525 aa14.01□□□□□ -0.17
CHERP-203ENST00000546361 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
CHERP-203ENST00000546361 PIBF1Q8WXW3 757 aa14.01□□□□□ -0.17
CHERP-203ENST00000546361 CDK5RAP3Q96JB5 506 aa14.01□□□□□ -0.17
CHERP-203ENST00000546361 NLRP3Q96P20 1036 aa14.01□□□□□ -0.17
CHERP-203ENST00000546361 ZNF287Q9HBT7 754 aa14.01□□□□□ -0.17
CHERP-203ENST00000546361 PRPF40BQ6NWY9 871 aaKnown RBP14.01□□□□□ -0.17
CHERP-203ENST00000546361 DDX17Q92841 729 aaKnown RBP14.01□□□□□ -0.17
CHERP-203ENST00000546361 SIRT1Q96EB6 747 aa14.01□□□□□ -0.17
CHERP-203ENST00000546361 PARD3Q8TEW0 1356 aa14.01□□□□□ -0.17
CHERP-203ENST00000546361 LMBR1LQ6UX01 489 aa14.01□□□□□ -0.17
CHERP-203ENST00000546361 SAMD9LQ8IVG5 1584 aa14.01□□□□□ -0.17
CHERP-203ENST00000546361 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
CHERP-203ENST00000546361 NIP7Q9Y221 180 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHERP-203ENST00000546361 CDKL5O76039 1030 aa14□□□□□ -0.17
CHERP-203ENST00000546361 MBD3O95983 291 aa14□□□□□ -0.17
CHERP-203ENST00000546361 GOLIM4O00461 696 aa14□□□□□ -0.17
CHERP-203ENST00000546361 RNF214Q8ND24 703 aa14□□□□□ -0.17
CHERP-203ENST00000546361 ZSCAN31Q96LW9 406 aaPredicted RBP14□□□□□ -0.17
CHERP-203ENST00000546361 ADGBQ8N7X0 1667 aa14□□□□□ -0.17
CHERP-203ENST00000546361 GRM8O00222 908 aa14□□□□□ -0.17
CHERP-203ENST00000546361 OLFM4Q6UX06 510 aa14□□□□□ -0.17
CHERP-203ENST00000546361 SHROOM2Q13796 1616 aa14□□□□□ -0.17
CHERP-203ENST00000546361 ZCCHC11Q5TAX3 1644 aaKnown RBP13.99□□□□□ -0.17
CHERP-203ENST00000546361 TSPYL6Q8N831 410 aa13.99□□□□□ -0.17
CHERP-203ENST00000546361 LINS1Q8NG48 757 aa13.99□□□□□ -0.17
CHERP-203ENST00000546361 WDR33Q9C0J8 1336 aaKnown RBP13.99□□□□□ -0.17
CHERP-203ENST00000546361 MPHOSPH10O00566 681 aaKnown RBP13.99□□□□□ -0.17
CHERP-203ENST00000546361 ME1P48163 572 aa13.99□□□□□ -0.17
CHERP-203ENST00000546361 CCDC152Q4G0S7 254 aa13.99□□□□□ -0.17
CHERP-203ENST00000546361 ARHGEF5Q12774 1597 aa13.99□□□□□ -0.17
CHERP-203ENST00000546361 ALDH1L1O75891 902 aa13.98□□□□□ -0.17
CHERP-203ENST00000546361 CAVIN1Q6NZI2 390 aaKnown RBP13.98□□□□□ -0.17
CHERP-203ENST00000546361 CCAR2Q8N163 923 aaKnown RBP13.98□□□□□ -0.17
CHERP-203ENST00000546361 DDX11Q96FC9 970 aa13.98□□□□□ -0.17
CHERP-203ENST00000546361 KRT85P78386 507 aa13.98□□□□□ -0.17
CHERP-203ENST00000546361 DZIP3Q86Y13 1208 aaKnown RBP13.98□□□□□ -0.17
CHERP-203ENST00000546361 TFCP2L1Q9NZI6 479 aa13.98□□□□□ -0.17
CHERP-203ENST00000546361 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
CHERP-203ENST00000546361 VAMP4O75379 141 aa13.98□□□□□ -0.17
CHERP-203ENST00000546361 RHPN1Q8TCX5 695 aa13.98□□□□□ -0.17
CHERP-203ENST00000546361 NAT10Q9H0A0 1025 aaKnown RBP13.98□□□□□ -0.17
CHERP-203ENST00000546361 RTCBQ9Y3I0 505 aaKnown RBP13.98□□□□□ -0.17
CHERP-203ENST00000546361 PREX2Q70Z35 1606 aa13.98□□□□□ -0.17
CHERP-203ENST00000546361 TRAK2O60296 914 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 KRT18P05783 430 aaKnown RBP13.97□□□□□ -0.17
CHERP-203ENST00000546361 LDHCP07864 332 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 ZNF213O14771 459 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 MYO5CQ9NQX4 1742 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 PLEKHG3A1L390 1219 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 RNMTO43148 476 aaKnown RBP13.97□□□□□ -0.17
CHERP-203ENST00000546361 ST5P78524 1137 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 TSHZ3Q63HK5 1081 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 ANKRD18AQ8IVF6 992 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 SLF2Q8IX21 1173 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 ZNF444Q8N0Y2 327 aaPredicted RBP13.97□□□□□ -0.17
CHERP-203ENST00000546361 OFD1O75665 1012 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 TPTE2Q6XPS3 522 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 IQCA1Q86XH1 822 aa13.97□□□□□ -0.17
CHERP-203ENST00000546361 ARHGEF12Q9NZN5 1544 aa13.96□□□□□ -0.17
CHERP-203ENST00000546361 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.17
CHERP-203ENST00000546361 EVI5LQ96CN4 794 aa13.96□□□□□ -0.17
CHERP-203ENST00000546361 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.18
CHERP-203ENST00000546361 MAP3K5Q99683 1374 aa13.96□□□□□ -0.18
CHERP-203ENST00000546361 NOL7Q9UMY1 257 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms