RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
UBR1-202ENST00000546274 KRT24Q2M2I5 525 aa9.5□□□□□ -0.89
UBR1-202ENST00000546274 TXNDC2Q86VQ3 553 aa9.5□□□□□ -0.89
UBR1-202ENST00000546274 CDC45O75419 566 aa9.5□□□□□ -0.89
UBR1-202ENST00000546274 GTF2A1P52655 376 aaPredicted RBP9.5□□□□□ -0.89
UBR1-202ENST00000546274 PIBF1Q8WXW3 757 aa9.5□□□□□ -0.89
UBR1-202ENST00000546274 COG3Q96JB2 828 aa9.5□□□□□ -0.89
UBR1-202ENST00000546274 TOMM22Q9NS69 142 aa9.5□□□□□ -0.89
UBR1-202ENST00000546274 GEMIN8Q9NWZ8 242 aaKnown RBP9.5□□□□□ -0.89
UBR1-202ENST00000546274 OVOS2A0A0J9YW53 1432 aa9.5□□□□□ -0.89
UBR1-202ENST00000546274 OVOS2Q6IE36 1432 aa9.5□□□□□ -0.89
UBR1-202ENST00000546274 C16orf71Q8IYS4 520 aaPredicted RBP9.49□□□□□ -0.89
UBR1-202ENST00000546274 GPATCH11Q8N954 259 aa9.49□□□□□ -0.89
UBR1-202ENST00000546274 IBTKQ9P2D0 1353 aaPredicted RBP9.49□□□□□ -0.89
UBR1-202ENST00000546274 TTC22Q5TAA0 569 aa9.49□□□□□ -0.89
UBR1-202ENST00000546274 CLEC17AQ6ZS10 378 aa9.49□□□□□ -0.89
UBR1-202ENST00000546274 EID1Q9Y6B2 187 aa9.49□□□□□ -0.89
UBR1-202ENST00000546274 CCDC61Q9Y6R9 512 aa9.49□□□□□ -0.89
UBR1-202ENST00000546274 MSH6P52701 1360 aa9.49□□□□□ -0.89
UBR1-202ENST00000546274 PLCB2Q00722 1185 aa9.49□□□□□ -0.89
UBR1-202ENST00000546274 EIF4A2Q14240 407 aaKnown RBP9.49□□□□□ -0.89
UBR1-202ENST00000546274 TMED8Q6PL24 325 aaPredicted RBP9.49□□□□□ -0.89
UBR1-202ENST00000546274 OTUD7AQ8TE49 926 aaPredicted RBP9.49□□□□□ -0.89
UBR1-202ENST00000546274 ANKRD7Q92527 254 aa9.49□□□□□ -0.89
UBR1-202ENST00000546274 NPHP4O75161 1426 aaPredicted RBP9.49□□□□□ -0.89
UBR1-202ENST00000546274 N4BP2Q86UW6 1770 aaPredicted RBP9.48□□□□□ -0.89
UBR1-202ENST00000546274 RTL1A6NKG5 1358 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 TMEM2Q9UHN6 1383 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 TSPYL1Q9H0U9 437 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 FAM208AQ9UK61 1670 aaKnown RBP9.48□□□□□ -0.89
UBR1-202ENST00000546274 CRB1P82279 1406 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 CHL1O00533 1208 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 NAA30Q147X3 362 aaPredicted RBP9.48□□□□□ -0.89
UBR1-202ENST00000546274 ANKRD44Q8N8A2 993 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 BANK1Q8NDB2 785 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 CHAMP1Q96JM3 812 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 DIAPH3Q9NSV4 1193 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 KIAA0232Q92628 1395 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 ROBO2Q9HCK4 1378 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 HNRNPH2P55795 449 aaKnown RBP9.48□□□□□ -0.89
UBR1-202ENST00000546274 CEP85Q6P2H3 762 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.48□□□□□ -0.89
UBR1-202ENST00000546274 CTNNA3Q9UI47 895 aa9.48□□□□□ -0.89
UBR1-202ENST00000546274 XRN1Q8IZH2 1706 aaKnown RBP9.47□□□□□ -0.89
UBR1-202ENST00000546274 USP26Q9BXU7 913 aa9.47□□□□□ -0.89
UBR1-202ENST00000546274 LRRC37A3O60309 1634 aa9.47□□□□□ -0.89
UBR1-202ENST00000546274 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
UBR1-202ENST00000546274 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
UBR1-202ENST00000546274 ZNF622Q969S3 477 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■■□□ 16.9
UBR1-202ENST00000546274 ST7Q9NRC1 585 aa9.47□□□□□ -0.89
UBR1-202ENST00000546274 RGPD8O14715 1765 aaPredicted RBP9.47□□□□□ -0.89
UBR1-202ENST00000546274 DIP2AQ14689 1571 aa9.46□□□□□ -0.89
UBR1-202ENST00000546274 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.89
UBR1-202ENST00000546274 SULT6B1Q6IMI4 303 aa9.46□□□□□ -0.89
UBR1-202ENST00000546274 LRSAM1Q6UWE0 723 aa9.46□□□□□ -0.89
UBR1-202ENST00000546274 MCM10Q7L590 875 aa9.46□□□□□ -0.89
UBR1-202ENST00000546274 LMBRD1Q9NUN5 540 aa9.46□□□□□ -0.89
UBR1-202ENST00000546274 GYS2P54840 703 aa9.46□□□□□ -0.9
UBR1-202ENST00000546274 RAD51AP2Q09MP3 1159 aa9.46□□□□□ -0.9
UBR1-202ENST00000546274 FKBP5Q13451 457 aaPredicted RBP9.46□□□□□ -0.9
UBR1-202ENST00000546274 YY1AP1Q9H869 796 aa9.46□□□□□ -0.9
UBR1-202ENST00000546274 EFCC1Q9HA90 598 aa9.46□□□□□ -0.9
UBR1-202ENST00000546274 DDX41Q9UJV9 622 aaKnown RBP9.46□□□□□ -0.9
UBR1-202ENST00000546274 ADAMTS13Q76LX8 1427 aa9.46□□□□□ -0.9
UBR1-202ENST00000546274 MARF1Q9Y4F3 1742 aaKnown RBP9.46□□□□□ -0.9
UBR1-202ENST00000546274 TNNT1P13805 278 aa9.46□□□□□ -0.9
UBR1-202ENST00000546274 NCBP1Q09161 790 aaKnown RBP9.46□□□□□ -0.9
UBR1-202ENST00000546274 AXDND1Q5T1B0 1012 aaPredicted RBP9.46□□□□□ -0.9
UBR1-202ENST00000546274 TMEM63CQ9P1W3 806 aa9.46□□□□□ -0.9
UBR1-202ENST00000546274 CYP2E1P05181 493 aaPredicted RBP9.45□□□□□ -0.9
UBR1-202ENST00000546274 SSH2Q76I76 1423 aa9.45□□□□□ -0.9
UBR1-202ENST00000546274 KRT222Q8N1A0 295 aa9.45□□□□□ -0.9
UBR1-202ENST00000546274 GPT2Q8TD30 523 aa9.45□□□□□ -0.9
UBR1-202ENST00000546274 TTC21BQ7Z4L5 1316 aa9.45□□□□□ -0.9
UBR1-202ENST00000546274 USP6P35125 1406 aa9.45□□□□□ -0.9
UBR1-202ENST00000546274 SMARCA5O60264 1052 aaPredicted RBP9.45□□□□□ -0.9
UBR1-202ENST00000546274 SDSP20132 328 aa9.45□□□□□ -0.9
UBR1-202ENST00000546274 RPAP2Q8IXW5 612 aaPredicted RBP9.45□□□□□ -0.9
UBR1-202ENST00000546274 MEIS3Q99687 375 aa9.45□□□□□ -0.9
UBR1-202ENST00000546274 USP25Q9UHP3 1055 aa9.45□□□□□ -0.9
UBR1-202ENST00000546274 USP31Q70CQ4 1352 aa9.45□□□□□ -0.9
UBR1-202ENST00000546274 PTPRCP08575 1304 aa9.45□□□□□ -0.9
UBR1-202ENST00000546274 PKP1Q13835 747 aa9.44□□□□□ -0.9
UBR1-202ENST00000546274 RABEP1Q15276 862 aa9.44□□□□□ -0.9
UBR1-202ENST00000546274 C10orf67Q8IYJ2 551 aa9.44□□□□□ -0.9
UBR1-202ENST00000546274 LTBP4Q8N2S1 1624 aa9.44□□□□□ -0.9
UBR1-202ENST00000546274 HSP90AB2PQ58FF8 381 aa9.44□□□□□ -0.9
UBR1-202ENST00000546274 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
UBR1-202ENST00000546274 PLEKHG1Q9ULL1 1385 aa9.44□□□□□ -0.9
UBR1-202ENST00000546274 PIK3C2AO00443 1686 aa9.44□□□□□ -0.9
UBR1-202ENST00000546274 DHX16O60231 1041 aaKnown RBP9.43□□□□□ -0.9
UBR1-202ENST00000546274 CT47A1Q5JQC4 288 aaPredicted RBP9.43□□□□□ -0.9
UBR1-202ENST00000546274 ACEP12821 1306 aa9.43□□□□□ -0.9
UBR1-202ENST00000546274 MYCBPQ99417 103 aaPredicted RBP9.43□□□□□ -0.9
UBR1-202ENST00000546274 RASSF4Q9H2L5 321 aa9.43□□□□□ -0.9
UBR1-202ENST00000546274 CACNA1FO60840 1977 aa9.43□□□□□ -0.9
UBR1-202ENST00000546274 TULP1O00294 542 aaPredicted RBP9.43□□□□□ -0.9
UBR1-202ENST00000546274 KIF18AQ8NI77 898 aa9.43□□□□□ -0.9
UBR1-202ENST00000546274 MORC2Q9Y6X9 1032 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms