RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SLC39A6Q13433 755 aa17.11■□□□□ 0.33
COPS7A-221ENST00000546229 ZBTB1Q9Y2K1 713 aa17.11■□□□□ 0.33
COPS7A-221ENST00000546229 COL11A2P13942 1736 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-221ENST00000546229 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
COPS7A-221ENST00000546229 FCHSD2O94868 740 aa17.09■□□□□ 0.33
COPS7A-221ENST00000546229 CARMIL3Q8ND23 1372 aa17.09■□□□□ 0.33
COPS7A-221ENST00000546229 WDR90Q96KV7 1748 aa17.09■□□□□ 0.33
COPS7A-221ENST00000546229 BCORQ6W2J9 1755 aa17.09■□□□□ 0.33
COPS7A-221ENST00000546229 CHRNA5P30532 468 aa17.08■□□□□ 0.32
COPS7A-221ENST00000546229 USPL1Q5W0Q7 1092 aa17.08■□□□□ 0.32
COPS7A-221ENST00000546229 NMRK2Q9NPI5 230 aa17.08■□□□□ 0.32
COPS7A-221ENST00000546229 TIAM2Q8IVF5 1701 aa17.07■□□□□ 0.32
COPS7A-221ENST00000546229 CEMIPQ8WUJ3 1361 aa17.07■□□□□ 0.32
COPS7A-221ENST00000546229 NFIXQ14938 502 aa17.07■□□□□ 0.32
COPS7A-221ENST00000546229 VSIG10Q8N0Z9 540 aa17.07■□□□□ 0.32
COPS7A-221ENST00000546229 NARFQ9UHQ1 456 aa17.07■□□□□ 0.32
COPS7A-221ENST00000546229 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
COPS7A-221ENST00000546229 PRELPP51888 382 aa17.06■□□□□ 0.32
COPS7A-221ENST00000546229 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
COPS7A-221ENST00000546229 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
COPS7A-221ENST00000546229 PIM2Q9P1W9 311 aa17.06■□□□□ 0.32
COPS7A-221ENST00000546229 C9orf131Q5VYM1 1079 aa17.05■□□□□ 0.32
COPS7A-221ENST00000546229 PCNTO95613 3336 aa17.04■□□□□ 0.32
COPS7A-221ENST00000546229 TOMM70O94826 608 aa17.04■□□□□ 0.32
COPS7A-221ENST00000546229 DALRD3Q5D0E6 543 aaKnown RBP17.04■□□□□ 0.32
COPS7A-221ENST00000546229 IL17REQ8NFR9 667 aa17.04■□□□□ 0.32
COPS7A-221ENST00000546229 HEG1Q9ULI3 1381 aa17.03■□□□□ 0.32
COPS7A-221ENST00000546229 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
COPS7A-221ENST00000546229 ARFGEF2Q9Y6D5 1785 aa17.02■□□□□ 0.32
COPS7A-221ENST00000546229 DNAJC5GQ8N7S2 189 aa17.02■□□□□ 0.32
COPS7A-221ENST00000546229 ZNF496Q96IT1 587 aaPredicted RBP17.02■□□□□ 0.32
COPS7A-221ENST00000546229 ZPR1O75312 459 aa17.01■□□□□ 0.31
COPS7A-221ENST00000546229 IFFO2Q5TF58 517 aa17.01■□□□□ 0.31
COPS7A-221ENST00000546229 FER1L6Q2WGJ9 1857 aa17.01■□□□□ 0.31
COPS7A-221ENST00000546229 RASSF7Q02833 373 aa17■□□□□ 0.31
COPS7A-221ENST00000546229 CCDC88AQ3V6T2 1871 aa16.99■□□□□ 0.31
COPS7A-221ENST00000546229 SERPINB2P05120 415 aa16.99■□□□□ 0.31
COPS7A-221ENST00000546229 ZNF790Q6PG37 636 aa16.99■□□□□ 0.31
COPS7A-221ENST00000546229 RBM46Q8TBY0 533 aaKnown RBP16.99■□□□□ 0.31
COPS7A-221ENST00000546229 RSPH6AQ9H0K4 717 aa16.99■□□□□ 0.31
COPS7A-221ENST00000546229 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
COPS7A-221ENST00000546229 ZC3H4Q9UPT8 1303 aaKnown RBP16.98■□□□□ 0.31
COPS7A-221ENST00000546229 APLP1P51693 650 aa16.98■□□□□ 0.31
COPS7A-221ENST00000546229 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
COPS7A-221ENST00000546229 DICER1Q9UPY3 1922 aaKnown RBP16.98■□□□□ 0.31
COPS7A-221ENST00000546229 GNAT3A8MTJ3 354 aa16.97■□□□□ 0.31
COPS7A-221ENST00000546229 NFKBIEO00221 500 aa16.97■□□□□ 0.31
COPS7A-221ENST00000546229 CANXP27824 592 aaKnown RBP16.97■□□□□ 0.31
COPS7A-221ENST00000546229 GAS2L2Q8NHY3 880 aa16.97■□□□□ 0.31
COPS7A-221ENST00000546229 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
COPS7A-221ENST00000546229 LAMB4A4D0S4 1761 aa16.96■□□□□ 0.31
COPS7A-221ENST00000546229 KCNQ3O43525 872 aa16.95■□□□□ 0.3
COPS7A-221ENST00000546229 SLX4Q8IY92 1834 aa16.94■□□□□ 0.3
COPS7A-221ENST00000546229 U2SURPO15042 1029 aaKnown RBP16.94■□□□□ 0.3
COPS7A-221ENST00000546229 CAMTA2O94983 1202 aa16.94■□□□□ 0.3
COPS7A-221ENST00000546229 STARD3NLO95772 234 aa16.94■□□□□ 0.3
COPS7A-221ENST00000546229 IL6STP40189 918 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-221ENST00000546229 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
COPS7A-221ENST00000546229 TTC5Q8N0Z6 440 aa16.94■□□□□ 0.3
COPS7A-221ENST00000546229 CACNA1SQ13698 1873 aa16.94■□□□□ 0.3
COPS7A-221ENST00000546229 KDM2BQ8NHM5 1336 aa16.94■□□□□ 0.3
COPS7A-221ENST00000546229 KDM3BQ7LBC6 1761 aa16.93■□□□□ 0.3
COPS7A-221ENST00000546229 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
COPS7A-221ENST00000546229 TEFQ10587 303 aa16.93■□□□□ 0.3
COPS7A-221ENST00000546229 FSTL1Q12841 308 aa16.93■□□□□ 0.3
COPS7A-221ENST00000546229 C2CD5Q86YS7 1000 aa16.93■□□□□ 0.3
COPS7A-221ENST00000546229 A1BGP04217 495 aa16.92■□□□□ 0.3
COPS7A-221ENST00000546229 LMNB1P20700 586 aa16.92■□□□□ 0.3
COPS7A-221ENST00000546229 HTRA3P83110 453 aa16.92■□□□□ 0.3
COPS7A-221ENST00000546229 TTLL6Q8N841 843 aa16.92■□□□□ 0.3
COPS7A-221ENST00000546229 A0A087WZG4 1122 aa16.91■□□□□ 0.3
COPS7A-221ENST00000546229 PRAMEF22A3QJZ6 481 aa16.91■□□□□ 0.3
COPS7A-221ENST00000546229 FMNL2Q96PY5 1086 aa16.91■□□□□ 0.3
COPS7A-221ENST00000546229 TEX13AQ9BXU3 409 aaPredicted RBP16.91■□□□□ 0.3
COPS7A-221ENST00000546229 RRAGCQ9HB90 399 aa16.91■□□□□ 0.3
COPS7A-221ENST00000546229 DLG5Q8TDM6 1919 aa16.91■□□□□ 0.3
COPS7A-221ENST00000546229 POTECB2RU33 542 aa16.9■□□□□ 0.3
COPS7A-221ENST00000546229 BICDL1Q6ZP65 573 aa16.9■□□□□ 0.3
COPS7A-221ENST00000546229 JMYQ8N9B5 988 aa16.9■□□□□ 0.3
COPS7A-221ENST00000546229 BRIP1Q9BX63 1249 aa16.9■□□□□ 0.3
COPS7A-221ENST00000546229 TBC1D2BQ9UPU7 963 aa16.9■□□□□ 0.3
COPS7A-221ENST00000546229 GLTPD2A6NH11 291 aa16.89■□□□□ 0.29
COPS7A-221ENST00000546229 PPP2R1AP30153 589 aa16.89■□□□□ 0.29
COPS7A-221ENST00000546229 CCDC24Q8N4L8 307 aa16.89■□□□□ 0.29
COPS7A-221ENST00000546229 USP16Q9Y5T5 823 aa16.89■□□□□ 0.29
COPS7A-221ENST00000546229 LTBP3Q9NS15 1303 aa16.89■□□□□ 0.29
COPS7A-221ENST00000546229 H0YIN7 160 aa16.88■□□□□ 0.29
COPS7A-221ENST00000546229 KLRG1Q96E93 195 aa16.88■□□□□ 0.29
COPS7A-221ENST00000546229 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
COPS7A-221ENST00000546229 BTBD11A6QL63 1104 aa16.87■□□□□ 0.29
COPS7A-221ENST00000546229 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
COPS7A-221ENST00000546229 NBPF26B4DH59 902 aa16.86■□□□□ 0.29
COPS7A-221ENST00000546229 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
COPS7A-221ENST00000546229 NBPF10Q6P3W6 841 aaKnown RBP16.86■□□□□ 0.29
COPS7A-221ENST00000546229 MCM10Q7L590 875 aa16.86■□□□□ 0.29
COPS7A-221ENST00000546229 NBPF15Q8N660 670 aa16.86■□□□□ 0.29
COPS7A-221ENST00000546229 PDZRN3Q9UPQ7 1066 aa16.86■□□□□ 0.29
COPS7A-221ENST00000546229 SRGNP10124 158 aa16.85■□□□□ 0.29
COPS7A-221ENST00000546229 PDE6BP35913 854 aa16.85■□□□□ 0.29
COPS7A-221ENST00000546229 DZIP3Q86Y13 1208 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms