RNA–Protein interactions for RNA: ENST00000546087.5

SOD2-215, Transcript of superoxide dismutase 2, humanhuman

TSL 2 BASIC

Gene SOD2, Length 2,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-215ENST00000546087 KCPQ6ZWJ8 1503 aa22.4■■□□□ 1.18
SOD2-215ENST00000546087 API5Q9BZZ5 524 aaKnown RBP22.4■■□□□ 1.18
SOD2-215ENST00000546087 PTPRCP08575 1304 aa22.39■■□□□ 1.18
SOD2-215ENST00000546087 PRAMEF22A3QJZ6 481 aa22.39■■□□□ 1.17
SOD2-215ENST00000546087 PIGBQ92521 554 aa22.39■■□□□ 1.17
SOD2-215ENST00000546087 MVPQ14764 893 aaKnown RBP22.38■■□□□ 1.17
SOD2-215ENST00000546087 LAMB4A4D0S4 1761 aa22.38■■□□□ 1.17
SOD2-215ENST00000546087 SNRPA1P09661 255 aaKnown RBP22.37■■□□□ 1.17
SOD2-215ENST00000546087 G2E3Q7L622 706 aa22.37■■□□□ 1.17
SOD2-215ENST00000546087 ABCC4O15439 1325 aa22.37■■□□□ 1.17
SOD2-215ENST00000546087 B4GALNT3Q6L9W6 998 aa22.36■■□□□ 1.17
SOD2-215ENST00000546087 TMEM57Q8N5G2 664 aa22.36■■□□□ 1.17
SOD2-215ENST00000546087 CHPF2Q9P2E5 772 aa22.36■■□□□ 1.17
SOD2-215ENST00000546087 PRIM1P49642 420 aaKnown RBP22.35■■□□□ 1.17
SOD2-215ENST00000546087 FLIIQ13045 1269 aa22.35■■□□□ 1.17
SOD2-215ENST00000546087 SYTL4Q96C24 671 aaPredicted RBP22.35■■□□□ 1.17
SOD2-215ENST00000546087 DBF4Q9UBU7 674 aaPredicted RBP22.35■■□□□ 1.17
SOD2-215ENST00000546087 TRIM37O94972 964 aa22.34■■□□□ 1.17
SOD2-215ENST00000546087 CCDC136Q96JN2 1154 aa22.34■■□□□ 1.17
SOD2-215ENST00000546087 ITPRIPQ8IWB1 547 aa22.34■■□□□ 1.17
SOD2-215ENST00000546087 ATG3Q9NT62 314 aa22.34■■□□□ 1.17
SOD2-215ENST00000546087 ASAP1Q9ULH1 1129 aa22.34■■□□□ 1.17
SOD2-215ENST00000546087 SF3B2Q13435 895 aaKnown RBP22.33■■□□□ 1.17
SOD2-215ENST00000546087 DDX19BQ9UMR2 479 aa22.33■■□□□ 1.16
SOD2-215ENST00000546087 PTCD1O75127 700 aaKnown RBP22.32■■□□□ 1.16
SOD2-215ENST00000546087 AAMPQ13685 434 aa22.32■■□□□ 1.16
SOD2-215ENST00000546087 ACSBG1Q96GR2 724 aa22.32■■□□□ 1.16
SOD2-215ENST00000546087 SBF2Q86WG5 1849 aa22.31■■□□□ 1.16
SOD2-215ENST00000546087 BCL11BQ9C0K0 894 aaPredicted RBP22.31■■□□□ 1.16
SOD2-215ENST00000546087 TSHZ2Q9NRE2 1034 aa22.31■■□□□ 1.16
SOD2-215ENST00000546087 USP16Q9Y5T5 823 aa22.31■■□□□ 1.16
SOD2-215ENST00000546087 TNS1Q9HBL0 1735 aaKnown RBP22.31■■□□□ 1.16
SOD2-215ENST00000546087 PHAXQ9H814 394 aaKnown RBP22.31■■□□□ 1.16
SOD2-215ENST00000546087 FKBP5Q13451 457 aaPredicted RBP22.3■■□□□ 1.16
SOD2-215ENST00000546087 ANXA1P04083 346 aa22.3■■□□□ 1.16
SOD2-215ENST00000546087 DDX21Q9NR30 783 aaKnown RBP eCLIP22.3■■□□□ 1.16
SOD2-215ENST00000546087 PROSER3Q2NL68 480 aa22.29■■□□□ 1.16
SOD2-215ENST00000546087 PDIA6Q15084 440 aa22.29■■□□□ 1.16
SOD2-215ENST00000546087 BAG6P46379 1132 aa22.28■■□□□ 1.16
SOD2-215ENST00000546087 INTS3Q68E01 1043 aaKnown RBP22.28■■□□□ 1.16
SOD2-215ENST00000546087 VSIG10Q8N0Z9 540 aa22.28■■□□□ 1.16
SOD2-215ENST00000546087 HYPKQ9NX55 129 aa22.28■■□□□ 1.16
SOD2-215ENST00000546087 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.16
SOD2-215ENST00000546087 F6X3S4 739 aa22.27■■□□□ 1.16
SOD2-215ENST00000546087 DEFB132Q7Z7B7 95 aa22.27■■□□□ 1.16
SOD2-215ENST00000546087 NHSQ6T4R5 1651 aa22.26■■□□□ 1.15
SOD2-215ENST00000546087 PTF1AQ7RTS3 328 aa22.26■■□□□ 1.15
SOD2-215ENST00000546087 ERBB4Q15303 1308 aa22.26■■□□□ 1.15
SOD2-215ENST00000546087 PXDNLA1KZ92 1463 aa22.25■■□□□ 1.15
SOD2-215ENST00000546087 KCNQ2O43526 872 aa22.25■■□□□ 1.15
SOD2-215ENST00000546087 APBA3O96018 575 aa22.25■■□□□ 1.15
SOD2-215ENST00000546087 RBM42Q9BTD8 480 aaKnown RBP22.25■■□□□ 1.15
SOD2-215ENST00000546087 PLSCR1O15162 318 aa22.24■■□□□ 1.15
SOD2-215ENST00000546087 TEX13AQ9BXU3 409 aaPredicted RBP22.24■■□□□ 1.15
SOD2-215ENST00000546087 CHMP4BQ9H444 224 aaKnown RBP22.24■■□□□ 1.15
SOD2-215ENST00000546087 ZBTB7BO15156 539 aaPredicted RBP22.23■■□□□ 1.15
SOD2-215ENST00000546087 SLC4A10Q6U841 1118 aa22.23■■□□□ 1.15
SOD2-215ENST00000546087 CAMKK2Q96RR4 588 aa22.23■■□□□ 1.15
SOD2-215ENST00000546087 ZBTB40Q9NUA8 1239 aa22.23■■□□□ 1.15
SOD2-215ENST00000546087 MYL6BP14649 208 aa22.23■■□□□ 1.15
SOD2-215ENST00000546087 CCT4P50991 539 aaKnown RBP22.23■■□□□ 1.15
SOD2-215ENST00000546087 TJP1Q07157 1748 aa22.22■■□□□ 1.15
SOD2-215ENST00000546087 LRP10Q7Z4F1 713 aa22.22■■□□□ 1.15
SOD2-215ENST00000546087 EN1Q05925 392 aaPredicted RBP22.22■■□□□ 1.15
SOD2-215ENST00000546087 DNAJC10Q8IXB1 793 aa22.22■■□□□ 1.15
SOD2-215ENST00000546087 SLC4A9Q96Q91 983 aa22.22■■□□□ 1.15
SOD2-215ENST00000546087 ADCY9O60503 1353 aa22.21■■□□□ 1.15
SOD2-215ENST00000546087 PI4KAP2A4QPH2 592 aa22.2■■□□□ 1.14
SOD2-215ENST00000546087 PIP4K2AP48426 406 aaPredicted RBP22.2■■□□□ 1.14
SOD2-215ENST00000546087 PI4KAP1Q8N8J0 262 aa22.2■■□□□ 1.14
SOD2-215ENST00000546087 BTAF1O14981 1849 aa22.2■■□□□ 1.14
SOD2-215ENST00000546087 NBPF26B4DH59 902 aa22.2■■□□□ 1.14
SOD2-215ENST00000546087 NBPF14Q5TI25 921 aa22.2■■□□□ 1.14
SOD2-215ENST00000546087 NBPF10Q6P3W6 841 aaKnown RBP22.2■■□□□ 1.14
SOD2-215ENST00000546087 NBPF15Q8N660 670 aa22.2■■□□□ 1.14
SOD2-215ENST00000546087 SMARCC1Q92922 1105 aaPredicted RBP22.2■■□□□ 1.14
SOD2-215ENST00000546087 PCDHB15Q9Y5E8 787 aa22.2■■□□□ 1.14
SOD2-215ENST00000546087 CICQ96RK0 1608 aaPredicted RBP22.19■■□□□ 1.14
SOD2-215ENST00000546087 PALLDQ8WX93 1383 aa22.19■■□□□ 1.14
SOD2-215ENST00000546087 RGPD3A6NKT7 1758 aaPredicted RBP22.19■■□□□ 1.14
SOD2-215ENST00000546087 RGPD4Q7Z3J3 1758 aa22.19■■□□□ 1.14
SOD2-215ENST00000546087 DDX58O95786 925 aaKnown RBP22.19■■□□□ 1.14
SOD2-215ENST00000546087 A1BGP04217 495 aa22.19■■□□□ 1.14
SOD2-215ENST00000546087 DNAAF4Q8WXU2 420 aa22.19■■□□□ 1.14
SOD2-215ENST00000546087 STARD3NLO95772 234 aa22.19■■□□□ 1.14
SOD2-215ENST00000546087 KSR2Q6VAB6 950 aa22.19■■□□□ 1.14
SOD2-215ENST00000546087 XAGE3Q8WTP9 111 aa22.19■■□□□ 1.14
SOD2-215ENST00000546087 AIMP1Q12904 312 aaKnown RBP22.18■■□□□ 1.14
SOD2-215ENST00000546087 EZH2Q15910 746 aaKnown RBP22.18■■□□□ 1.14
SOD2-215ENST00000546087 COPS6Q7L5N1 327 aa22.18■■□□□ 1.14
SOD2-215ENST00000546087 ATP10DQ9P241 1426 aa22.17■■□□□ 1.14
SOD2-215ENST00000546087 MAP3K2Q9Y2U5 619 aa22.17■■□□□ 1.14
SOD2-215ENST00000546087 ZNF831Q5JPB2 1677 aa22.17■■□□□ 1.14
SOD2-215ENST00000546087 KDM2BQ8NHM5 1336 aa22.17■■□□□ 1.14
SOD2-215ENST00000546087 LOC102724428A0A0B4J2F2 783 aa22.16■■□□□ 1.14
SOD2-215ENST00000546087 SIK1P57059 783 aa22.16■■□□□ 1.14
SOD2-215ENST00000546087 CYP19A1P11511 503 aaPredicted RBP22.15■■□□□ 1.14
SOD2-215ENST00000546087 BEND3Q5T5X7 828 aa22.14■■□□□ 1.14
SOD2-215ENST00000546087 CENPQQ7L2Z9 268 aaPredicted RBP22.14■■□□□ 1.14
SOD2-215ENST00000546087 SRCIN1Q9C0H9 1055 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms