RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 XRN1Q8IZH2 1706 aaKnown RBP19.19■□□□□ 0.66
LDLR-204ENST00000545707 PI4KAP2A4QPH2 592 aa19.19■□□□□ 0.66
LDLR-204ENST00000545707 ANAPC15P60006 121 aa19.19■□□□□ 0.66
LDLR-204ENST00000545707 NBPF6Q5VWK0 638 aa19.19■□□□□ 0.66
LDLR-204ENST00000545707 PI4KAP1Q8N8J0 262 aa19.19■□□□□ 0.66
LDLR-204ENST00000545707 NBPF4Q96M43 638 aa19.19■□□□□ 0.66
LDLR-204ENST00000545707 PI4K2BQ8TCG2 481 aa19.17■□□□□ 0.66
LDLR-204ENST00000545707 FAM208AQ9UK61 1670 aaKnown RBP19.17■□□□□ 0.66
LDLR-204ENST00000545707 GADD45BO75293 160 aaPredicted RBP19.17■□□□□ 0.66
LDLR-204ENST00000545707 LRSAM1Q6UWE0 723 aa19.17■□□□□ 0.66
LDLR-204ENST00000545707 EIF4A1P60842 406 aaKnown RBP19.16■□□□□ 0.66
LDLR-204ENST00000545707 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
LDLR-204ENST00000545707 HSPA4P34932 840 aa19.16■□□□□ 0.66
LDLR-204ENST00000545707 POLA2Q14181 598 aa19.16■□□□□ 0.66
LDLR-204ENST00000545707 MSNP26038 577 aaKnown RBP19.15■□□□□ 0.66
LDLR-204ENST00000545707 RASEFQ8IZ41 740 aa19.15■□□□□ 0.66
LDLR-204ENST00000545707 SPG7Q9UQ90 795 aa19.15■□□□□ 0.66
LDLR-204ENST00000545707 CPA1P15085 419 aa19.15■□□□□ 0.66
LDLR-204ENST00000545707 CWC27Q6UX04 472 aaKnown RBP19.15■□□□□ 0.66
LDLR-204ENST00000545707 LRRC59Q96AG4 307 aaKnown RBP19.15■□□□□ 0.66
LDLR-204ENST00000545707 INTS4Q96HW7 963 aaKnown RBP19.15■□□□□ 0.66
LDLR-204ENST00000545707 LRRC37A3O60309 1634 aa19.15■□□□□ 0.66
LDLR-204ENST00000545707 BEND3Q5T5X7 828 aa19.14■□□□□ 0.66
LDLR-204ENST00000545707 MPRIPQ6WCQ1 1025 aa19.14■□□□□ 0.66
LDLR-204ENST00000545707 THEMISQ8N1K5 641 aaPredicted RBP19.14■□□□□ 0.66
LDLR-204ENST00000545707 DNAAF4Q8WXU2 420 aa19.14■□□□□ 0.65
LDLR-204ENST00000545707 RAB11FIP3O75154 756 aa19.13■□□□□ 0.65
LDLR-204ENST00000545707 SNX14Q9Y5W7 946 aa19.13■□□□□ 0.65
LDLR-204ENST00000545707 SGSM2O43147 1006 aa19.13■□□□□ 0.65
LDLR-204ENST00000545707 KIF1BPQ96EK5 621 aa19.13■□□□□ 0.65
LDLR-204ENST00000545707 PDLIM2Q96JY6 352 aa19.13■□□□□ 0.65
LDLR-204ENST00000545707 TUBGCP6Q96RT7 1819 aa19.13■□□□□ 0.65
LDLR-204ENST00000545707 USP48Q86UV5 1035 aa19.12■□□□□ 0.65
LDLR-204ENST00000545707 BABAM1Q9NWV8 329 aa19.12■□□□□ 0.65
LDLR-204ENST00000545707 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.12■□□□□ 0.65
LDLR-204ENST00000545707 AOX1Q06278 1338 aa19.12■□□□□ 0.65
LDLR-204ENST00000545707 MBD3O95983 291 aa19.12■□□□□ 0.65
LDLR-204ENST00000545707 OS9Q13438 667 aaPredicted RBP19.12■□□□□ 0.65
LDLR-204ENST00000545707 KIAA1211Q6ZU35 1233 aa19.12■□□□□ 0.65
LDLR-204ENST00000545707 LSG1Q9H089 658 aaKnown RBP19.11■□□□□ 0.65
LDLR-204ENST00000545707 PHF8Q9UPP1 1060 aa19.11■□□□□ 0.65
LDLR-204ENST00000545707 SETD1BQ9UPS6 1966 aaKnown RBP19.11■□□□□ 0.65
LDLR-204ENST00000545707 IP6K1Q92551 441 aa19.11■□□□□ 0.65
LDLR-204ENST00000545707 PA2G4Q9UQ80 394 aaKnown RBP19.11■□□□□ 0.65
LDLR-204ENST00000545707 ARHGAP23Q9P227 1491 aa19.11■□□□□ 0.65
LDLR-204ENST00000545707 RAD50Q92878 1312 aa19.1■□□□□ 0.65
LDLR-204ENST00000545707 CEMIPQ8WUJ3 1361 aa19.1■□□□□ 0.65
LDLR-204ENST00000545707 PRAMEF22A3QJZ6 481 aa19.1■□□□□ 0.65
LDLR-204ENST00000545707 BTBD11A6QL63 1104 aa19.1■□□□□ 0.65
LDLR-204ENST00000545707 AK2P54819 239 aa19.1■□□□□ 0.65
LDLR-204ENST00000545707 TEFQ10587 303 aa19.1■□□□□ 0.65
LDLR-204ENST00000545707 DDX54Q8TDD1 881 aaKnown RBP19.1■□□□□ 0.65
LDLR-204ENST00000545707 XPCQ01831 940 aaPredicted RBP19.1■□□□□ 0.65
LDLR-204ENST00000545707 CNTROBQ8N137 903 aa19.1■□□□□ 0.65
LDLR-204ENST00000545707 SLIT1O75093 1534 aa19.1■□□□□ 0.65
LDLR-204ENST00000545707 PXDNLA1KZ92 1463 aa19.09■□□□□ 0.65
LDLR-204ENST00000545707 PROSER3Q2NL68 480 aa19.09■□□□□ 0.65
LDLR-204ENST00000545707 ZNF530Q6P9A1 599 aaPredicted RBP19.09■□□□□ 0.65
LDLR-204ENST00000545707 IL17RAQ96F46 866 aa19.09■□□□□ 0.65
LDLR-204ENST00000545707 RUFY3Q7L099 469 aa19.09■□□□□ 0.65
LDLR-204ENST00000545707 NOL7Q9UMY1 257 aaKnown RBP19.08■□□□□ 0.64
LDLR-204ENST00000545707 CNPY2Q9Y2B0 182 aa19.08■□□□□ 0.64
LDLR-204ENST00000545707 ADCY9O60503 1353 aa19.08■□□□□ 0.64
LDLR-204ENST00000545707 PTH1RQ03431 593 aa19.08■□□□□ 0.64
LDLR-204ENST00000545707 CWF19L2Q2TBE0 894 aaKnown RBP19.08■□□□□ 0.64
LDLR-204ENST00000545707 MPNDQ8N594 471 aa19.08■□□□□ 0.64
LDLR-204ENST00000545707 TTC14Q96N46 770 aa19.08■□□□□ 0.64
LDLR-204ENST00000545707 WDR33Q9C0J8 1336 aaKnown RBP19.07■□□□□ 0.64
LDLR-204ENST00000545707 RPAP1Q9BWH6 1393 aaPredicted RBP19.07■□□□□ 0.64
LDLR-204ENST00000545707 OFD1O75665 1012 aa19.07■□□□□ 0.64
LDLR-204ENST00000545707 LARGE1O95461 756 aa19.07■□□□□ 0.64
LDLR-204ENST00000545707 MARF1Q9Y4F3 1742 aaKnown RBP19.07■□□□□ 0.64
LDLR-204ENST00000545707 ANKARQ7Z5J8 1434 aa19.07■□□□□ 0.64
LDLR-204ENST00000545707 CASTP20810 708 aaKnown RBP19.06■□□□□ 0.64
LDLR-204ENST00000545707 HSP90AA2PQ14568 343 aaPredicted RBP19.06■□□□□ 0.64
LDLR-204ENST00000545707 TSPY26PQ9H489 355 aa19.06■□□□□ 0.64
LDLR-204ENST00000545707 MAP3K2Q9Y2U5 619 aa19.06■□□□□ 0.64
LDLR-204ENST00000545707 PSME1Q06323 249 aa19.06■□□□□ 0.64
LDLR-204ENST00000545707 ESCO1Q5FWF5 840 aa19.06■□□□□ 0.64
LDLR-204ENST00000545707 UBE2Q2Q8WVN8 375 aa19.06■□□□□ 0.64
LDLR-204ENST00000545707 C9orf78Q9NZ63 289 aaPredicted RBP19.06■□□□□ 0.64
LDLR-204ENST00000545707 ADCK5Q3MIX3 580 aa19.05■□□□□ 0.64
LDLR-204ENST00000545707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.05■□□□□ 0.64
LDLR-204ENST00000545707 DIAPH3Q9NSV4 1193 aa19.05■□□□□ 0.64
LDLR-204ENST00000545707 SYT1P21579 422 aa19.04■□□□□ 0.64
LDLR-204ENST00000545707 HS1BP3Q53T59 392 aa19.04■□□□□ 0.64
LDLR-204ENST00000545707 LIMCH1Q9UPQ0 1083 aa19.04■□□□□ 0.64
LDLR-204ENST00000545707 R3HCC1Q9Y3T6 440 aaKnown RBP19.04■□□□□ 0.64
LDLR-204ENST00000545707 PRPF40BQ6NWY9 871 aaKnown RBP19.04■□□□□ 0.64
LDLR-204ENST00000545707 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
LDLR-204ENST00000545707 LMOD2Q6P5Q4 547 aa19.03■□□□□ 0.64
LDLR-204ENST00000545707 GLRX3O76003 335 aaKnown RBP19.03■□□□□ 0.64
LDLR-204ENST00000545707 ZSCAN22P10073 491 aaPredicted RBP19.03■□□□□ 0.64
LDLR-204ENST00000545707 AIMP1Q12904 312 aaKnown RBP19.03■□□□□ 0.64
LDLR-204ENST00000545707 COL9A3Q14050 684 aaPredicted RBP19.03■□□□□ 0.64
LDLR-204ENST00000545707 AKAP4Q5JQC9 854 aa19.03■□□□□ 0.64
LDLR-204ENST00000545707 CCDC83Q8IWF9 413 aa19.03■□□□□ 0.64
LDLR-204ENST00000545707 STX6O43752 255 aa19.02■□□□□ 0.64
LDLR-204ENST00000545707 JAKMIP1Q96N16 626 aaKnown RBP19.02■□□□□ 0.64
LDLR-204ENST00000545707 DBF4Q9UBU7 674 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms