RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 DNMT1P26358 1616 aaKnown RBP14.63□□□□□ -0.07
COL4A6-209ENST00000545689 GOLGA6L10A6NI86 522 aa14.63□□□□□ -0.07
COL4A6-209ENST00000545689 BOLA2Q9H3K6 86 aa14.63□□□□□ -0.07
COL4A6-209ENST00000545689 RNF41Q9H4P4 317 aaPredicted RBP14.62□□□□□ -0.07
COL4A6-209ENST00000545689 KLHL40Q2TBA0 621 aa14.62□□□□□ -0.07
COL4A6-209ENST00000545689 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
COL4A6-209ENST00000545689 F6X3S4 739 aa14.62□□□□□ -0.07
COL4A6-209ENST00000545689 ANAPC15P60006 121 aa14.62□□□□□ -0.07
COL4A6-209ENST00000545689 C8orf76Q96K31 380 aa14.62□□□□□ -0.07
COL4A6-209ENST00000545689 TEX13AQ9BXU3 409 aaPredicted RBP14.62□□□□□ -0.07
COL4A6-209ENST00000545689 RBM10P98175 930 aaKnown RBP14.62□□□□□ -0.07
COL4A6-209ENST00000545689 GBP3Q9H0R5 595 aa14.62□□□□□ -0.07
COL4A6-209ENST00000545689 EPB41L2O43491 1005 aaKnown RBP14.61□□□□□ -0.07
COL4A6-209ENST00000545689 SFPQP23246 707 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL4A6-209ENST00000545689 MAP3K12Q12852 859 aa14.61□□□□□ -0.07
COL4A6-209ENST00000545689 SNX21Q969T3 373 aa14.61□□□□□ -0.07
COL4A6-209ENST00000545689 ZC3H6P61129 1189 aaKnown RBP14.61□□□□□ -0.07
COL4A6-209ENST00000545689 TTF1Q15361 905 aaPredicted RBP14.61□□□□□ -0.07
COL4A6-209ENST00000545689 INSRP06213 1382 aa14.61□□□□□ -0.07
COL4A6-209ENST00000545689 IFIT5Q13325 482 aaKnown RBP14.61□□□□□ -0.07
COL4A6-209ENST00000545689 SLC5A1P13866 664 aa14.61□□□□□ -0.07
COL4A6-209ENST00000545689 CAVIN4Q5BKX8 364 aa14.61□□□□□ -0.07
COL4A6-209ENST00000545689 AXDND1Q5T1B0 1012 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-209ENST00000545689 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-209ENST00000545689 ZNF397Q8NF99 534 aaPredicted RBP14.6□□□□□ -0.07
COL4A6-209ENST00000545689 TANGO6Q9C0B7 1094 aa14.6□□□□□ -0.07
COL4A6-209ENST00000545689 FILIP1Q7Z7B0 1213 aa14.6□□□□□ -0.07
COL4A6-209ENST00000545689 H0YHG0 523 aa14.6□□□□□ -0.07
COL4A6-209ENST00000545689 CFAP100Q494V2 611 aa14.6□□□□□ -0.07
COL4A6-209ENST00000545689 ZFYVE27Q5T4F4 411 aa14.6□□□□□ -0.07
COL4A6-209ENST00000545689 STX6O43752 255 aa14.6□□□□□ -0.07
COL4A6-209ENST00000545689 NAPBQ9H115 298 aa14.6□□□□□ -0.07
COL4A6-209ENST00000545689 BAG4O95429 457 aaKnown RBP14.6□□□□□ -0.07
COL4A6-209ENST00000545689 CCDC148Q8NFR7 591 aa14.6□□□□□ -0.07
COL4A6-209ENST00000545689 GSDMDP57764 484 aa14.59□□□□□ -0.07
COL4A6-209ENST00000545689 FBXO31Q5XUX0 539 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-209ENST00000545689 TNRQ92752 1358 aa14.59□□□□□ -0.07
COL4A6-209ENST00000545689 ZNF213O14771 459 aa14.59□□□□□ -0.07
COL4A6-209ENST00000545689 PTPN14Q15678 1187 aa14.59□□□□□ -0.07
COL4A6-209ENST00000545689 PYM1Q9BRP8 204 aaKnown RBP14.59□□□□□ -0.07
COL4A6-209ENST00000545689 UBE2HP62256 183 aa14.59□□□□□ -0.07
COL4A6-209ENST00000545689 SOS1Q07889 1333 aaPredicted RBP14.59□□□□□ -0.07
COL4A6-209ENST00000545689 CAMK4Q16566 473 aa14.59□□□□□ -0.07
COL4A6-209ENST00000545689 FERMT3Q86UX7 667 aa14.59□□□□□ -0.07
COL4A6-209ENST00000545689 TEX14Q8IWB6 1497 aa14.59□□□□□ -0.07
COL4A6-209ENST00000545689 MRPL50Q8N5N7 158 aaKnown RBP14.59□□□□□ -0.07
COL4A6-209ENST00000545689 ANKRD44Q8N8A2 993 aa14.59□□□□□ -0.07
COL4A6-209ENST00000545689 COL17A1Q9UMD9 1497 aaPredicted RBP14.58□□□□□ -0.07
COL4A6-209ENST00000545689 WDR7Q9Y4E6 1490 aa14.58□□□□□ -0.07
COL4A6-209ENST00000545689 NPC1L1Q9UHC9 1359 aa14.58□□□□□ -0.07
COL4A6-209ENST00000545689 ACEP12821 1306 aa14.58□□□□□ -0.07
COL4A6-209ENST00000545689 ANKRD18BA2A2Z9 1011 aa14.58□□□□□ -0.07
COL4A6-209ENST00000545689 CCDC191Q8NCU4 936 aa14.58□□□□□ -0.07
COL4A6-209ENST00000545689 MAP3K2Q9Y2U5 619 aa14.58□□□□□ -0.07
COL4A6-209ENST00000545689 ARHGAP29Q52LW3 1261 aa14.58□□□□□ -0.08
COL4A6-209ENST00000545689 STX1AQ16623 288 aa14.58□□□□□ -0.08
COL4A6-209ENST00000545689 GJB2P29033 226 aa14.58□□□□□ -0.08
COL4A6-209ENST00000545689 UBXN4Q92575 508 aa14.58□□□□□ -0.08
COL4A6-209ENST00000545689 PPIP5K1Q6PFW1 1433 aa14.58□□□□□ -0.08
COL4A6-209ENST00000545689 IFNL2Q8IZJ0 200 aa14.58□□□□□ -0.08
COL4A6-209ENST00000545689 CCDC8Q9H0W5 538 aaPredicted RBP14.58□□□□□ -0.08
COL4A6-209ENST00000545689 PATL2C9JE40 543 aaKnown RBP14.57□□□□□ -0.08
COL4A6-209ENST00000545689 MCM3P25205 808 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 SSRP1Q08945 709 aaKnown RBP14.57□□□□□ -0.08
COL4A6-209ENST00000545689 MPRIPQ6WCQ1 1025 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 KIF18AQ8NI77 898 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 ZSCAN16Q9H4T2 348 aaPredicted RBP14.57□□□□□ -0.08
COL4A6-209ENST00000545689 ADGRL2O95490 1459 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 SLC12A7Q9Y666 1083 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 ABCC10Q5T3U5 1492 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 EIF5P55010 431 aaKnown RBP14.57□□□□□ -0.08
COL4A6-209ENST00000545689 WWC2Q6AWC2 1192 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 ALDH1L1O75891 902 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 ATP2B2Q01814 1243 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 XPCQ01831 940 aaPredicted RBP14.57□□□□□ -0.08
COL4A6-209ENST00000545689 USHBP1Q8N6Y0 703 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 CLIP2Q9UDT6 1046 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 PPP1R42Q7Z4L9 355 aa14.57□□□□□ -0.08
COL4A6-209ENST00000545689 SEC63Q9UGP8 760 aaKnown RBP14.57□□□□□ -0.08
COL4A6-209ENST00000545689 SKAP1Q86WV1 359 aa14.56□□□□□ -0.08
COL4A6-209ENST00000545689 CTCFLQ8NI51 663 aaPredicted RBP14.56□□□□□ -0.08
COL4A6-209ENST00000545689 FGFR1OPO95684 399 aaKnown RBP14.56□□□□□ -0.08
COL4A6-209ENST00000545689 BCL11BQ9C0K0 894 aaPredicted RBP14.56□□□□□ -0.08
COL4A6-209ENST00000545689 UHRF1BP1LA0JNW5 1464 aa14.56□□□□□ -0.08
COL4A6-209ENST00000545689 A0A087WZG4 1122 aa14.56□□□□□ -0.08
COL4A6-209ENST00000545689 KIAA1328Q86T90 577 aa14.56□□□□□ -0.08
COL4A6-209ENST00000545689 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
COL4A6-209ENST00000545689 STK11IPQ8N1F8 1099 aa14.56□□□□□ -0.08
COL4A6-209ENST00000545689 CWC25Q9NXE8 425 aaPredicted RBP14.56□□□□□ -0.08
COL4A6-209ENST00000545689 TOP1P11387 765 aaKnown RBP14.55□□□□□ -0.08
COL4A6-209ENST00000545689 RHPN1Q8TCX5 695 aa14.55□□□□□ -0.08
COL4A6-209ENST00000545689 GOLGA8AA7E2F4 631 aa14.55□□□□□ -0.08
COL4A6-209ENST00000545689 GOLGA8BA8MQT2 603 aa14.55□□□□□ -0.08
COL4A6-209ENST00000545689 TAF4BQ92750 862 aa14.55□□□□□ -0.08
COL4A6-209ENST00000545689 FKBP15Q5T1M5 1219 aa14.55□□□□□ -0.08
COL4A6-209ENST00000545689 NEK1Q96PY6 1258 aa14.55□□□□□ -0.08
COL4A6-209ENST00000545689 TESK2Q96S53 571 aa14.55□□□□□ -0.08
COL4A6-209ENST00000545689 TSG101Q99816 390 aa14.55□□□□□ -0.08
COL4A6-209ENST00000545689 RAB34Q9BZG1 259 aa14.55□□□□□ -0.08
COL4A6-209ENST00000545689 CGNQ9P2M7 1197 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms