RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ZNF496Q96IT1 587 aaPredicted RBP26.49■■□□□ 1.83
CHD4-213ENST00000545584 NARFQ9UHQ1 456 aa26.49■■□□□ 1.83
CHD4-213ENST00000545584 HEG1Q9ULI3 1381 aa26.48■■□□□ 1.83
CHD4-213ENST00000545584 A0A0G2JLW4 131 aa26.48■■□□□ 1.83
CHD4-213ENST00000545584 BTBD11A6QL63 1104 aa26.48■■□□□ 1.83
CHD4-213ENST00000545584 CANXP27824 592 aaKnown RBP26.48■■□□□ 1.83
CHD4-213ENST00000545584 FMNL2Q96PY5 1086 aa26.48■■□□□ 1.83
CHD4-213ENST00000545584 SIPA1L3O60292 1781 aaPredicted RBP26.46■■□□□ 1.83
CHD4-213ENST00000545584 DDR1Q08345 913 aa26.46■■□□□ 1.83
CHD4-213ENST00000545584 BCS1LQ9Y276 419 aa26.46■■□□□ 1.83
CHD4-213ENST00000545584 A0A087WZG4 1122 aa26.45■■□□□ 1.82
CHD4-213ENST00000545584 DPEP1P16444 411 aa26.45■■□□□ 1.82
CHD4-213ENST00000545584 TM4SF1P30408 202 aa26.45■■□□□ 1.82
CHD4-213ENST00000545584 N4BP2Q86UW6 1770 aaPredicted RBP26.44■■□□□ 1.82
CHD4-213ENST00000545584 POLRMTO00411 1230 aaKnown RBP26.43■■□□□ 1.82
CHD4-213ENST00000545584 HTATSF1O43719 755 aaKnown RBP26.43■■□□□ 1.82
CHD4-213ENST00000545584 NPM2Q86SE8 214 aaKnown RBP26.43■■□□□ 1.82
CHD4-213ENST00000545584 GIGYF1O75420 1035 aaPredicted RBP26.42■■□□□ 1.82
CHD4-213ENST00000545584 MCM10Q7L590 875 aa26.42■■□□□ 1.82
CHD4-213ENST00000545584 KIAA1551Q9HCM1 1747 aa26.42■■□□□ 1.82
CHD4-213ENST00000545584 EIF5P55010 431 aaKnown RBP26.41■■□□□ 1.82
CHD4-213ENST00000545584 NFIXQ14938 502 aa26.4■■□□□ 1.82
CHD4-213ENST00000545584 ZNF330Q9Y3S2 320 aaPredicted RBP26.4■■□□□ 1.82
CHD4-213ENST00000545584 ATP10DQ9P241 1426 aa26.39■■□□□ 1.82
CHD4-213ENST00000545584 KCNQ3O43525 872 aa26.39■■□□□ 1.82
CHD4-213ENST00000545584 PNNQ9H307 717 aaKnown RBP26.39■■□□□ 1.82
CHD4-213ENST00000545584 PIM2Q9P1W9 311 aa26.39■■□□□ 1.82
CHD4-213ENST00000545584 IL6STP40189 918 aaPredicted RBP26.38■■□□□ 1.81
CHD4-213ENST00000545584 C1QTNF8P60827 252 aa26.38■■□□□ 1.81
CHD4-213ENST00000545584 DCTN1Q14203 1278 aa26.38■■□□□ 1.81
CHD4-213ENST00000545584 RALBP1Q15311 655 aa26.37■■□□□ 1.81
CHD4-213ENST00000545584 ARHGAP27Q6ZUM4 889 aa26.37■■□□□ 1.81
CHD4-213ENST00000545584 BCL2L12Q9HB09 334 aa26.37■■□□□ 1.81
CHD4-213ENST00000545584 KCNA3P22001 575 aa26.36■■□□□ 1.81
CHD4-213ENST00000545584 A1BGP04217 495 aa26.35■■□□□ 1.81
CHD4-213ENST00000545584 SERPINB2P05120 415 aa26.35■■□□□ 1.81
CHD4-213ENST00000545584 DALRD3Q5D0E6 543 aaKnown RBP26.35■■□□□ 1.81
CHD4-213ENST00000545584 GPBP1L1Q9HC44 474 aaPredicted RBP26.35■■□□□ 1.81
CHD4-213ENST00000545584 ADCY9O60503 1353 aa26.34■■□□□ 1.81
CHD4-213ENST00000545584 SNRPA1P09661 255 aaKnown RBP26.34■■□□□ 1.81
CHD4-213ENST00000545584 DDX10Q13206 875 aaKnown RBP26.34■■□□□ 1.81
CHD4-213ENST00000545584 TAF7Q15545 349 aaPredicted RBP26.34■■□□□ 1.81
CHD4-213ENST00000545584 BICDL1Q6ZP65 573 aa26.34■■□□□ 1.81
CHD4-213ENST00000545584 TBC1D2BQ9UPU7 963 aa26.34■■□□□ 1.81
CHD4-213ENST00000545584 MAPK8IP3Q9UPT6 1336 aa26.34■■□□□ 1.81
CHD4-213ENST00000545584 CHRNA5P30532 468 aa26.33■■□□□ 1.81
CHD4-213ENST00000545584 BRCA1P38398 1863 aaKnown RBP26.33■■□□□ 1.81
CHD4-213ENST00000545584 ZNF526Q8TF50 670 aaPredicted RBP26.32■■□□□ 1.8
CHD4-213ENST00000545584 USP16Q9Y5T5 823 aa26.32■■□□□ 1.8
CHD4-213ENST00000545584 PLEKHF1Q96S99 279 aa26.31■■□□□ 1.8
CHD4-213ENST00000545584 AFDNP55196 1824 aaKnown RBP26.3■■□□□ 1.8
CHD4-213ENST00000545584 NFE2L2Q16236 605 aa26.3■■□□□ 1.8
CHD4-213ENST00000545584 PNISRQ8TF01 805 aaKnown RBP26.3■■□□□ 1.8
CHD4-213ENST00000545584 TBC1D9BQ66K14 1250 aa26.29■■□□□ 1.8
CHD4-213ENST00000545584 NRXN2Q9P2S2 1712 aa26.28■■□□□ 1.8
CHD4-213ENST00000545584 ARFGEF1Q9Y6D6 1849 aa26.28■■□□□ 1.8
CHD4-213ENST00000545584 DZIP3Q86Y13 1208 aaKnown RBP26.28■■□□□ 1.8
CHD4-213ENST00000545584 PRAMEF22A3QJZ6 481 aa26.27■■□□□ 1.8
CHD4-213ENST00000545584 SCN7AQ01118 1682 aa26.27■■□□□ 1.8
CHD4-213ENST00000545584 DLG5Q8TDM6 1919 aa26.26■■□□□ 1.79
CHD4-213ENST00000545584 SENP3-EIF4A1A0A087X0R7 540 aa26.26■■□□□ 1.79
CHD4-213ENST00000545584 SETDB2Q96T68 719 aa26.26■■□□□ 1.79
CHD4-213ENST00000545584 MIS18AQ9NYP9 233 aa26.26■■□□□ 1.79
CHD4-213ENST00000545584 CARMIL3Q8ND23 1372 aa26.25■■□□□ 1.79
CHD4-213ENST00000545584 H0YIN7 160 aa26.25■■□□□ 1.79
CHD4-213ENST00000545584 CAMTA2O94983 1202 aa26.25■■□□□ 1.79
CHD4-213ENST00000545584 PIP4K2AP48426 406 aaPredicted RBP26.25■■□□□ 1.79
CHD4-213ENST00000545584 C2CD5Q86YS7 1000 aa26.25■■□□□ 1.79
CHD4-213ENST00000545584 MYBBP1AQ9BQG0 1328 aaKnown RBP26.24■■□□□ 1.79
CHD4-213ENST00000545584 NPHP1O15259 732 aa26.24■■□□□ 1.79
CHD4-213ENST00000545584 PDZRN3Q9UPQ7 1066 aa26.23■■□□□ 1.79
CHD4-213ENST00000545584 ZNF652Q9Y2D9 606 aa26.23■■□□□ 1.79
CHD4-213ENST00000545584 TTLL6Q8N841 843 aa26.22■■□□□ 1.79
CHD4-213ENST00000545584 PDE6BP35913 854 aa26.21■■□□□ 1.79
CHD4-213ENST00000545584 C9orf131Q5VYM1 1079 aa26.21■■□□□ 1.79
CHD4-213ENST00000545584 CLEC4GQ6UXB4 293 aa26.21■■□□□ 1.79
CHD4-213ENST00000545584 THUMPD2Q9BTF0 503 aaKnown RBP26.21■■□□□ 1.79
CHD4-213ENST00000545584 BRIP1Q9BX63 1249 aa26.21■■□□□ 1.79
CHD4-213ENST00000545584 PRR5LQ6MZQ0 368 aa26.2■■□□□ 1.78
CHD4-213ENST00000545584 CNBD1Q8NA66 436 aa26.2■■□□□ 1.78
CHD4-213ENST00000545584 NBPF26B4DH59 902 aa26.19■■□□□ 1.78
CHD4-213ENST00000545584 NBPF10Q6P3W6 841 aaKnown RBP26.19■■□□□ 1.78
CHD4-213ENST00000545584 NBPF15Q8N660 670 aa26.19■■□□□ 1.78
CHD4-213ENST00000545584 RIPK4P57078 832 aa26.18■■□□□ 1.78
CHD4-213ENST00000545584 ST5P78524 1137 aa26.18■■□□□ 1.78
CHD4-213ENST00000545584 BCORQ6W2J9 1755 aa26.18■■□□□ 1.78
CHD4-213ENST00000545584 EIF4A1P60842 406 aaKnown RBP26.17■■□□□ 1.78
CHD4-213ENST00000545584 LMOD3Q0VAK6 560 aa26.17■■□□□ 1.78
CHD4-213ENST00000545584 ZNF622Q969S3 477 aaKnown RBP eCLIP26.17■■□□□ 1.784e-12■■□□□ 11.4
CHD4-213ENST00000545584 RNF181Q9P0P0 153 aa26.17■■□□□ 1.78
CHD4-213ENST00000545584 KDM3BQ7LBC6 1761 aa26.17■■□□□ 1.78
CHD4-213ENST00000545584 DLEC1Q9Y238 1755 aa26.17■■□□□ 1.78
CHD4-213ENST00000545584 RGL2O15211 777 aa26.16■■□□□ 1.78
CHD4-213ENST00000545584 CCDC24Q8N4L8 307 aa26.16■■□□□ 1.78
CHD4-213ENST00000545584 LAMB4A4D0S4 1761 aa26.15■■□□□ 1.78
CHD4-213ENST00000545584 WDR43Q15061 677 aaKnown RBP eCLIP26.15■■□□□ 1.78
CHD4-213ENST00000545584 NBPF5PQ86XG9 351 aaPredicted RBP26.15■■□□□ 1.78
CHD4-213ENST00000545584 TMPOP42166 694 aaKnown RBP26.14■■□□□ 1.78
CHD4-213ENST00000545584 TSPYL4Q9UJ04 414 aa26.14■■□□□ 1.78
CHD4-213ENST00000545584 KIF3CO14782 793 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms