RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 RAPGEF4Q8WZA2 1011 aa5.08□□□□□ -1.6
LPCAT3-212ENST00000545459 GGNBP2Q9H3C7 697 aa5.08□□□□□ -1.6
LPCAT3-212ENST00000545459 EMILIN3Q9NT22 766 aa5.08□□□□□ -1.6
LPCAT3-212ENST00000545459 INSRP06213 1382 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 PCDH11XQ9BZA7 1347 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 PCDH11YQ9BZA8 1340 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 GRIN3BO60391 1043 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 GIGYF1O75420 1035 aaPredicted RBP5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 YBX3P16989 372 aaKnown RBP eCLIP5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 TATP17735 454 aaPredicted RBP5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 HMGB2P26583 209 aaKnown RBP5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 MAP3K9P80192 1104 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 TMF1P82094 1093 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 PDIA6Q15084 440 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 HSP90AB2PQ58FF8 381 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 MSL1Q68DK7 614 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 C5P01031 1676 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 KIF20BQ96Q89 1820 aa5.07□□□□□ -1.6
LPCAT3-212ENST00000545459 FLT4P35916 1363 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 KIF24Q5T7B8 1368 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 PALLDQ8WX93 1383 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 POTEFA5A3E0 1075 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 CYP27B1O15528 508 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 TBC1D12O60347 775 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 POTEIP0CG38 1075 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 CDCA8Q53HL2 280 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 MPRIPQ6WCQ1 1025 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 FLAD1Q8NFF5 587 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 CD2APQ9Y5K6 639 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 TAF1LQ8IZX4 1826 aa5.06□□□□□ -1.6
LPCAT3-212ENST00000545459 ITGB4P16144 1822 aa5.05□□□□□ -1.6
LPCAT3-212ENST00000545459 ZC3H15Q8WU90 426 aaKnown RBP5.05□□□□□ -1.6
LPCAT3-212ENST00000545459 SMARCC1Q92922 1105 aaPredicted RBP5.05□□□□□ -1.6
LPCAT3-212ENST00000545459 CARD14Q9BXL6 1004 aa5.05□□□□□ -1.6
LPCAT3-212ENST00000545459 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.05□□□□□ -1.6
LPCAT3-212ENST00000545459 EMILIN1Q9Y6C2 1016 aa5.05□□□□□ -1.6
LPCAT3-212ENST00000545459 C4BP0C0L5 1744 aa5.05□□□□□ -1.6
LPCAT3-212ENST00000545459 PKD1L3Q7Z443 1732 aa5.05□□□□□ -1.6
LPCAT3-212ENST00000545459 TOGARAM1Q9Y4F4 1720 aa5.05□□□□□ -1.6
LPCAT3-212ENST00000545459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 PPM1GO15355 546 aaPredicted RBP5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 PHF14O94880 888 aa5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 TMEM92Q6UXU6 159 aa5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 AMIGO3Q86WK7 504 aa5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 PIGBQ92521 554 aa5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 AK7Q96M32 723 aa5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 SPG7Q9UQ90 795 aa5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 NCAPD2Q15021 1401 aa5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 NSD3Q9BZ95 1437 aa5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 ATP10DQ9P241 1426 aa5.04□□□□□ -1.6
LPCAT3-212ENST00000545459 ANKRD26Q9UPS8 1709 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 WASHC2AQ641Q2 1341 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 UBR3Q6ZT12 1888 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 MAP2P11137 1827 aaKnown RBP5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 LOC102724428A0A0B4J2F2 783 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 SSFA2P28290 1259 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 SIK1P57059 783 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 SMIM5Q71RC9 77 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 LINC00116Q8NCU8 138 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 OXER1Q8TDS5 423 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 EYA1Q99502 592 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 TMOD3Q9NYL9 352 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 UTRNP46939 3433 aa5.03□□□□□ -1.6
LPCAT3-212ENST00000545459 IGSF1Q8N6C5 1336 aa5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 ZNF316A6NFI3 1004 aaPredicted RBP5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 GNPATO15228 680 aa5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 SLC34A2O95436 690 aa5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 PHKG2P15735 406 aa5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 ATP6V1AP38606 617 aa5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 MLLT3P42568 568 aaPredicted RBP5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 ITPK1Q13572 414 aa5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 IFNL2Q8IZJ0 200 aa5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 PTCD2Q8WV60 388 aaKnown RBP5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 GPBP1L1Q9HC44 474 aaPredicted RBP5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 POLKQ9UBT6 870 aa5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 ASAP1Q9ULH1 1129 aa5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 ADCY9O60503 1353 aa5.02□□□□□ -1.61
LPCAT3-212ENST00000545459 EIF4A2Q14240 407 aaKnown RBP5.01□□□□□ -1.61
LPCAT3-212ENST00000545459 GPIHBP1Q8IV16 184 aa5.01□□□□□ -1.61
LPCAT3-212ENST00000545459 ZNF526Q8TF50 670 aaPredicted RBP5.01□□□□□ -1.61
LPCAT3-212ENST00000545459 ATG3Q9NT62 314 aa5.01□□□□□ -1.61
LPCAT3-212ENST00000545459 WWC3Q9ULE0 1092 aa5.01□□□□□ -1.61
LPCAT3-212ENST00000545459 PLEKHG2Q9H7P9 1386 aa5.01□□□□□ -1.61
LPCAT3-212ENST00000545459 GRXCR2A6NFK2 248 aa5□□□□□ -1.61
LPCAT3-212ENST00000545459 ERVV-2B6SEH9 535 aa5□□□□□ -1.61
LPCAT3-212ENST00000545459 ZMYND10O75800 440 aa5□□□□□ -1.61
LPCAT3-212ENST00000545459 MMP10P09238 476 aa5□□□□□ -1.61
LPCAT3-212ENST00000545459 TNNT2P45379 298 aaPredicted RBP5□□□□□ -1.61
LPCAT3-212ENST00000545459 TRIM26Q12899 539 aaPredicted RBP5□□□□□ -1.61
LPCAT3-212ENST00000545459 TRAPPC3LQ5T215 181 aa5□□□□□ -1.61
LPCAT3-212ENST00000545459 RBM26Q5T8P6 1007 aaKnown RBP5□□□□□ -1.61
LPCAT3-212ENST00000545459 POLR3GLQ9BT43 218 aa5□□□□□ -1.61
LPCAT3-212ENST00000545459 TIMELESSQ9UNS1 1208 aa5□□□□□ -1.61
LPCAT3-212ENST00000545459 RTCBQ9Y3I0 505 aaKnown RBP5□□□□□ -1.61
LPCAT3-212ENST00000545459 KDRP35968 1356 aa5□□□□□ -1.61
LPCAT3-212ENST00000545459 PXDNLA1KZ92 1463 aa5□□□□□ -1.61
LPCAT3-212ENST00000545459 KIF13BQ9NQT8 1826 aa5□□□□□ -1.61
LPCAT3-212ENST00000545459 ZNF831Q5JPB2 1677 aa4.99□□□□□ -1.61
LPCAT3-212ENST00000545459 CICQ96RK0 1608 aaPredicted RBP4.99□□□□□ -1.61
LPCAT3-212ENST00000545459 EVI5O60447 810 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms