RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 AMPHP49418 695 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 PSME1Q06323 249 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 EIF4A2Q14240 407 aaKnown RBP9.08□□□□□ -0.96
SPPL3-209ENST00000545209 NUDT18Q6ZVK8 323 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 GPIHBP1Q8IV16 184 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 EXOC6Q8TAG9 804 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 C19orf44Q9H6X5 657 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 ARHGEF10O15013 1369 aa9.08□□□□□ -0.96
SPPL3-209ENST00000545209 MAP3K19Q56UN5 1328 aa9.07□□□□□ -0.96
SPPL3-209ENST00000545209 DCCP43146 1447 aa9.07□□□□□ -0.96
SPPL3-209ENST00000545209 GPR37O15354 613 aa9.07□□□□□ -0.96
SPPL3-209ENST00000545209 ANKK1Q8NFD2 765 aa9.07□□□□□ -0.96
SPPL3-209ENST00000545209 HCSTQ9UBK5 93 aa9.07□□□□□ -0.96
SPPL3-209ENST00000545209 FANCIQ9NVI1 1328 aa9.06□□□□□ -0.96
SPPL3-209ENST00000545209 GNPATO15228 680 aa9.06□□□□□ -0.96
SPPL3-209ENST00000545209 ATF3P18847 181 aa9.06□□□□□ -0.96
SPPL3-209ENST00000545209 THSD4Q6ZMP0 1018 aa9.06□□□□□ -0.96
SPPL3-209ENST00000545209 CRBNQ96SW2 442 aa9.06□□□□□ -0.96
SPPL3-209ENST00000545209 RTL1A6NKG5 1358 aa9.06□□□□□ -0.96
SPPL3-209ENST00000545209 KIF1AQ12756 1690 aa9.06□□□□□ -0.96
SPPL3-209ENST00000545209 TMEM94Q12767 1356 aa9.05□□□□□ -0.96
SPPL3-209ENST00000545209 RARSP54136 660 aaKnown RBP9.05□□□□□ -0.96
SPPL3-209ENST00000545209 PDE3AQ14432 1141 aa9.05□□□□□ -0.96
SPPL3-209ENST00000545209 HSP90AB2PQ58FF8 381 aa9.05□□□□□ -0.96
SPPL3-209ENST00000545209 SULT6B1Q6IMI4 303 aa9.05□□□□□ -0.96
SPPL3-209ENST00000545209 KCNH5Q8NCM2 988 aa9.05□□□□□ -0.96
SPPL3-209ENST00000545209 PHACTR3Q96KR7 559 aa9.05□□□□□ -0.96
SPPL3-209ENST00000545209 PEAK1Q9H792 1746 aa9.05□□□□□ -0.96
SPPL3-209ENST00000545209 C1orf167Q5SNV9 1468 aa9.04□□□□□ -0.96
SPPL3-209ENST00000545209 BCAR3O75815 825 aa9.04□□□□□ -0.96
SPPL3-209ENST00000545209 MS4A1P11836 297 aa9.04□□□□□ -0.96
SPPL3-209ENST00000545209 HSPA2P54652 639 aa9.04□□□□□ -0.96
SPPL3-209ENST00000545209 GNAI1P63096 354 aa9.04□□□□□ -0.96
SPPL3-209ENST00000545209 NUTM2GQ5VZR2 741 aa9.04□□□□□ -0.96
SPPL3-209ENST00000545209 EYA1Q99502 592 aa9.04□□□□□ -0.96
SPPL3-209ENST00000545209 ADGRG1Q9Y653 693 aa9.04□□□□□ -0.96
SPPL3-209ENST00000545209 MSH6P52701 1360 aa9.03□□□□□ -0.96
SPPL3-209ENST00000545209 SOWAHBA6NEL2 793 aa9.03□□□□□ -0.96
SPPL3-209ENST00000545209 FOXO3O43524 673 aa9.03□□□□□ -0.96
SPPL3-209ENST00000545209 PTPN5P54829 565 aa9.03□□□□□ -0.96
SPPL3-209ENST00000545209 C20orf194Q5TEA3 1177 aa9.03□□□□□ -0.96
SPPL3-209ENST00000545209 LMOD2Q6P5Q4 547 aa9.03□□□□□ -0.96
SPPL3-209ENST00000545209 TSR2Q969E8 191 aaKnown RBP9.03□□□□□ -0.96
SPPL3-209ENST00000545209 ZNF428Q96B54 188 aa9.03□□□□□ -0.96
SPPL3-209ENST00000545209 ORAI2Q96SN7 254 aa9.03□□□□□ -0.96
SPPL3-209ENST00000545209 IFT57Q9NWB7 429 aa9.03□□□□□ -0.96
SPPL3-209ENST00000545209 RGPD1P0DJD0 1748 aa9.02□□□□□ -0.96
SPPL3-209ENST00000545209 LMTK3Q96Q04 1460 aa9.02□□□□□ -0.96
SPPL3-209ENST00000545209 FECHP22830 423 aa9.02□□□□□ -0.97
SPPL3-209ENST00000545209 HOXC9P31274 260 aa9.02□□□□□ -0.97
SPPL3-209ENST00000545209 EXOSC9Q06265 439 aaKnown RBP9.02□□□□□ -0.97
SPPL3-209ENST00000545209 AAMPQ13685 434 aa9.02□□□□□ -0.97
SPPL3-209ENST00000545209 AEBP1Q8IUX7 1158 aa9.02□□□□□ -0.97
SPPL3-209ENST00000545209 RBM46Q8TBY0 533 aaKnown RBP9.02□□□□□ -0.97
SPPL3-209ENST00000545209 FRAT1Q92837 279 aaPredicted RBP9.02□□□□□ -0.97
SPPL3-209ENST00000545209 LAS1LQ9Y4W2 734 aaKnown RBP9.02□□□□□ -0.97
SPPL3-209ENST00000545209 IGSF1Q8N6C5 1336 aa9.02□□□□□ -0.97
SPPL3-209ENST00000545209 KIF16BQ96L93 1317 aa9.02□□□□□ -0.97
SPPL3-209ENST00000545209 KDRP35968 1356 aa9.01□□□□□ -0.97
SPPL3-209ENST00000545209 BCAMP50895 628 aa9.01□□□□□ -0.97
SPPL3-209ENST00000545209 MST1RQ04912 1400 aa9.01□□□□□ -0.97
SPPL3-209ENST00000545209 FAM161AQ3B820 660 aa9.01□□□□□ -0.97
SPPL3-209ENST00000545209 KRT28Q7Z3Y7 464 aa9.01□□□□□ -0.97
SPPL3-209ENST00000545209 GAS2L2Q8NHY3 880 aa9.01□□□□□ -0.97
SPPL3-209ENST00000545209 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
SPPL3-209ENST00000545209 SMC4Q9NTJ3 1288 aa9.01□□□□□ -0.97
SPPL3-209ENST00000545209 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
SPPL3-209ENST00000545209 MARF1Q9Y4F3 1742 aaKnown RBP9.01□□□□□ -0.97
SPPL3-209ENST00000545209 NFAT5O94916 1531 aa9□□□□□ -0.97
SPPL3-209ENST00000545209 IPO8O15397 1037 aaKnown RBP9□□□□□ -0.97
SPPL3-209ENST00000545209 OATP04181 439 aa9□□□□□ -0.97
SPPL3-209ENST00000545209 ALDH1L2Q3SY69 923 aa9□□□□□ -0.97
SPPL3-209ENST00000545209 ZKSCAN2Q63HK3 967 aa9□□□□□ -0.97
SPPL3-209ENST00000545209 SAMD7Q7Z3H4 446 aa9□□□□□ -0.97
SPPL3-209ENST00000545209 FTSJ3Q8IY81 847 aaKnown RBP9□□□□□ -0.97
SPPL3-209ENST00000545209 RTF1Q92541 710 aaKnown RBP9□□□□□ -0.97
SPPL3-209ENST00000545209 IP6K1Q92551 441 aa9□□□□□ -0.97
SPPL3-209ENST00000545209 USP19O94966 1318 aa9□□□□□ -0.97
SPPL3-209ENST00000545209 NPHP3Q7Z494 1330 aa9□□□□□ -0.97
SPPL3-209ENST00000545209 SLIT3O75094 1523 aa9□□□□□ -0.97
SPPL3-209ENST00000545209 ZNF853P0CG23 659 aa8.99□□□□□ -0.97
SPPL3-209ENST00000545209 XPCQ01831 940 aaPredicted RBP8.99□□□□□ -0.97
SPPL3-209ENST00000545209 CENPQQ7L2Z9 268 aaPredicted RBP8.99□□□□□ -0.97
SPPL3-209ENST00000545209 THUMPD2Q9BTF0 503 aaKnown RBP8.99□□□□□ -0.97
SPPL3-209ENST00000545209 BCL2L13Q9BXK5 485 aa8.99□□□□□ -0.97
SPPL3-209ENST00000545209 STRCP1A6NGW2 1772 aa8.99□□□□□ -0.97
SPPL3-209ENST00000545209 TRPM3Q9HCF6 1732 aaPredicted RBP8.98□□□□□ -0.97
SPPL3-209ENST00000545209 ZBTB7CA1YPR0 619 aa8.98□□□□□ -0.97
SPPL3-209ENST00000545209 HTATSF1O43719 755 aaKnown RBP8.98□□□□□ -0.97
SPPL3-209ENST00000545209 GCP02774 474 aa8.98□□□□□ -0.97
SPPL3-209ENST00000545209 PANK1Q8TE04 598 aa8.98□□□□□ -0.97
SPPL3-209ENST00000545209 LTV1Q96GA3 475 aaPredicted RBP8.98□□□□□ -0.97
SPPL3-209ENST00000545209 MBIPQ9NS73 344 aa8.98□□□□□ -0.97
SPPL3-209ENST00000545209 LTN1O94822 1766 aa8.98□□□□□ -0.97
SPPL3-209ENST00000545209 PHRF1Q9P1Y6 1649 aaKnown RBP8.98□□□□□ -0.97
SPPL3-209ENST00000545209 DLG5Q8TDM6 1919 aa8.97□□□□□ -0.97
SPPL3-209ENST00000545209 RCCD1A6NED2 376 aa8.97□□□□□ -0.97
SPPL3-209ENST00000545209 DNAJB2P25686 324 aa8.97□□□□□ -0.97
SPPL3-209ENST00000545209 DZIP1LQ8IYY4 767 aaKnown RBP8.97□□□□□ -0.97
SPPL3-209ENST00000545209 SSH1Q8WYL5 1049 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms