RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 ANKRD36BQ8N2N9 1353 aa10.64□□□□□ -0.71
NECAP1-207ENST00000544891 SRGAP3O43295 1099 aa10.64□□□□□ -0.71
NECAP1-207ENST00000544891 CCDC184Q52MB2 194 aa10.64□□□□□ -0.71
NECAP1-207ENST00000544891 TSR2Q969E8 191 aaKnown RBP10.64□□□□□ -0.71
NECAP1-207ENST00000544891 NOM1Q5C9Z4 860 aaKnown RBP10.64□□□□□ -0.71
NECAP1-207ENST00000544891 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
NECAP1-207ENST00000544891 TTC21BQ7Z4L5 1316 aa10.64□□□□□ -0.71
NECAP1-207ENST00000544891 PLEKHH1Q9ULM0 1364 aa10.63□□□□□ -0.71
NECAP1-207ENST00000544891 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
NECAP1-207ENST00000544891 BTBD11A6QL63 1104 aa10.63□□□□□ -0.71
NECAP1-207ENST00000544891 UBR1Q8IWV7 1749 aa10.63□□□□□ -0.71
NECAP1-207ENST00000544891 PTPRMP28827 1452 aa10.63□□□□□ -0.71
NECAP1-207ENST00000544891 CPS1P31327 1500 aa10.63□□□□□ -0.71
NECAP1-207ENST00000544891 SIRT1Q96EB6 747 aa10.63□□□□□ -0.71
NECAP1-207ENST00000544891 POLR3AO14802 1390 aaPredicted RBP10.63□□□□□ -0.71
NECAP1-207ENST00000544891 FYB1O15117 783 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 BCAR3O75815 825 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 IGHMBP2P38935 993 aaKnown RBP10.62□□□□□ -0.71
NECAP1-207ENST00000544891 SF3B2Q13435 895 aaKnown RBP10.62□□□□□ -0.71
NECAP1-207ENST00000544891 SYCP1Q15431 976 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 LARP1BQ659C4 914 aaKnown RBP10.62□□□□□ -0.71
NECAP1-207ENST00000544891 TNRQ92752 1358 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 ZNF771Q7L3S4 317 aaPredicted RBP10.62□□□□□ -0.71
NECAP1-207ENST00000544891 STRN4Q9NRL3 753 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 CEP131Q9UPN4 1083 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 PRPF40AO75400 957 aaKnown RBP10.62□□□□□ -0.71
NECAP1-207ENST00000544891 IDI1Q13907 227 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 U3KPZ7 1027 aaPredicted RBP10.62□□□□□ -0.71
NECAP1-207ENST00000544891 IL16Q14005 1332 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 CCDC196A0A1B0GTZ2 297 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 KRT18P05783 430 aaKnown RBP10.62□□□□□ -0.71
NECAP1-207ENST00000544891 TAF7Q15545 349 aaPredicted RBP10.62□□□□□ -0.71
NECAP1-207ENST00000544891 AACSQ86V21 672 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 ARID3AQ99856 593 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 UBAC1Q9BSL1 405 aa10.62□□□□□ -0.71
NECAP1-207ENST00000544891 ATP7BP35670 1465 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 ERLIN2O94905 339 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 CEP57L1Q8IYX8 460 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 PDILTQ8N807 584 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 SH2B1Q9NRF2 756 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-207ENST00000544891 CWC15Q9P013 229 aaKnown RBP10.61□□□□□ -0.71
NECAP1-207ENST00000544891 FER1L4A9Z1Z3 1794 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 TEX13AQ9BXU3 409 aaPredicted RBP10.61□□□□□ -0.71
NECAP1-207ENST00000544891 PTPRCP08575 1304 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 FIBPO43427 364 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 PPFIBP1Q86W92 1011 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 CAGE1Q8TC20 777 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 TNMDQ9H2S6 317 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 SMTNL1A8MU46 457 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 IMMTQ16891 758 aaKnown RBP10.61□□□□□ -0.71
NECAP1-207ENST00000544891 SLC26A8Q96RN1 970 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 PDRG1Q9NUG6 133 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 FAM135BQ49AJ0 1406 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 ADGRB2O60241 1585 aa10.61□□□□□ -0.71
NECAP1-207ENST00000544891 SMC2O95347 1197 aa10.6□□□□□ -0.71
NECAP1-207ENST00000544891 ZMYM3Q14202 1370 aa10.6□□□□□ -0.71
NECAP1-207ENST00000544891 KIF2AO00139 706 aaPredicted RBP10.6□□□□□ -0.71
NECAP1-207ENST00000544891 RRP12Q5JTH9 1297 aaKnown RBP10.6□□□□□ -0.71
NECAP1-207ENST00000544891 RIMS1Q86UR5 1692 aaKnown RBP10.6□□□□□ -0.71
NECAP1-207ENST00000544891 RNF123Q5XPI4 1314 aa10.6□□□□□ -0.71
NECAP1-207ENST00000544891 IFIT1P09914 478 aaKnown RBP10.59□□□□□ -0.71
NECAP1-207ENST00000544891 ME1P48163 572 aa10.59□□□□□ -0.71
NECAP1-207ENST00000544891 DUSP27Q5VZP5 1158 aa10.59□□□□□ -0.71
NECAP1-207ENST00000544891 PHAXQ9H814 394 aaKnown RBP10.59□□□□□ -0.71
NECAP1-207ENST00000544891 HYPKQ9NX55 129 aa10.59□□□□□ -0.71
NECAP1-207ENST00000544891 NKTRP30414 1462 aaKnown RBP10.59□□□□□ -0.71
NECAP1-207ENST00000544891 HSP90AB2PQ58FF8 381 aa10.59□□□□□ -0.71
NECAP1-207ENST00000544891 IQCEQ6IPM2 695 aa10.59□□□□□ -0.71
NECAP1-207ENST00000544891 CNKSR2Q8WXI2 1034 aa10.59□□□□□ -0.71
NECAP1-207ENST00000544891 NRXN3Q9Y4C0 1643 aa10.59□□□□□ -0.71
NECAP1-207ENST00000544891 TMOD2Q9NZR1 351 aa10.59□□□□□ -0.71
NECAP1-207ENST00000544891 DDX54Q8TDD1 881 aaKnown RBP10.58□□□□□ -0.72
NECAP1-207ENST00000544891 SCAND2PQ9GZW5 306 aaPredicted RBP10.58□□□□□ -0.72
NECAP1-207ENST00000544891 TDO2P48775 406 aa10.58□□□□□ -0.72
NECAP1-207ENST00000544891 WASLO00401 505 aaPredicted RBP10.58□□□□□ -0.72
NECAP1-207ENST00000544891 SERPINC1P01008 464 aa10.58□□□□□ -0.72
NECAP1-207ENST00000544891 FOSBP53539 338 aa10.58□□□□□ -0.72
NECAP1-207ENST00000544891 C1orf115Q9H7X2 142 aa10.58□□□□□ -0.72
NECAP1-207ENST00000544891 DBF4Q9UBU7 674 aaPredicted RBP10.58□□□□□ -0.72
NECAP1-207ENST00000544891 PHF8Q9UPP1 1060 aa10.58□□□□□ -0.72
NECAP1-207ENST00000544891 SHPRHQ149N8 1683 aa10.58□□□□□ -0.72
NECAP1-207ENST00000544891 ERLIN1O75477 346 aa10.58□□□□□ -0.72
NECAP1-207ENST00000544891 ATP2B1P20020 1258 aa10.58□□□□□ -0.72
NECAP1-207ENST00000544891 RNF214Q8ND24 703 aa10.57□□□□□ -0.72
NECAP1-207ENST00000544891 SPATA32Q96LK8 384 aa10.57□□□□□ -0.72
NECAP1-207ENST00000544891 BCCIPQ9P287 314 aaKnown RBP eCLIP10.57□□□□□ -0.72
NECAP1-207ENST00000544891 MX1P20591 662 aa10.57□□□□□ -0.72
NECAP1-207ENST00000544891 SLF2Q8IX21 1173 aa10.57□□□□□ -0.72
NECAP1-207ENST00000544891 NUP62CLQ9H1M0 184 aa10.57□□□□□ -0.72
NECAP1-207ENST00000544891 RNF41Q9H4P4 317 aaPredicted RBP10.57□□□□□ -0.72
NECAP1-207ENST00000544891 ITSN1Q15811 1721 aa10.57□□□□□ -0.72
NECAP1-207ENST00000544891 MCM4P33991 863 aa10.57□□□□□ -0.72
NECAP1-207ENST00000544891 RARSP54136 660 aaKnown RBP10.57□□□□□ -0.72
NECAP1-207ENST00000544891 JAKMIP1Q96N16 626 aaKnown RBP10.57□□□□□ -0.72
NECAP1-207ENST00000544891 TECPR2O15040 1411 aa10.57□□□□□ -0.72
NECAP1-207ENST00000544891 CFAP65Q6ZU64 1925 aaKnown RBP10.57□□□□□ -0.72
NECAP1-207ENST00000544891 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
NECAP1-207ENST00000544891 CCDC66A2RUB6 948 aa10.57□□□□□ -0.72
NECAP1-207ENST00000544891 DMRT2Q9Y5R5 561 aa10.57□□□□□ -0.72
NECAP1-207ENST00000544891 PLEKHG1Q9ULL1 1385 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms