RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 USP3Q9Y6I4 520 aa10.7□□□□□ -0.7
SMCO2-206ENST00000543991 TTC24A2A3L6 582 aaPredicted RBP10.69□□□□□ -0.7
SMCO2-206ENST00000543991 J3QL48 77 aa10.69□□□□□ -0.7
SMCO2-206ENST00000543991 WDR4P57081 412 aaKnown RBP10.69□□□□□ -0.7
SMCO2-206ENST00000543991 CENPCQ03188 943 aa10.69□□□□□ -0.7
SMCO2-206ENST00000543991 POTEAQ6S8J7 498 aa10.69□□□□□ -0.7
SMCO2-206ENST00000543991 CYP4X1Q8N118 509 aa10.69□□□□□ -0.7
SMCO2-206ENST00000543991 NLRP3Q96P20 1036 aa10.69□□□□□ -0.7
SMCO2-206ENST00000543991 FHDC1Q9C0D6 1143 aaPredicted RBP10.69□□□□□ -0.7
SMCO2-206ENST00000543991 ZFAND3Q9H8U3 227 aa10.69□□□□□ -0.7
SMCO2-206ENST00000543991 GDF9O60383 454 aa10.68□□□□□ -0.7
SMCO2-206ENST00000543991 TEAD4Q15561 434 aa10.68□□□□□ -0.7
SMCO2-206ENST00000543991 NPAS4Q8IUM7 802 aa10.68□□□□□ -0.7
SMCO2-206ENST00000543991 AGBL1Q96MI9 1066 aa10.68□□□□□ -0.7
SMCO2-206ENST00000543991 ASB16Q96NS5 453 aa10.68□□□□□ -0.7
SMCO2-206ENST00000543991 SERTM1A2A2V5 107 aa10.67□□□□□ -0.7
SMCO2-206ENST00000543991 MEN1O00255 615 aa10.67□□□□□ -0.7
SMCO2-206ENST00000543991 TIMP2P16035 220 aa10.67□□□□□ -0.7
SMCO2-206ENST00000543991 COX20Q5RI15 118 aa10.67□□□□□ -0.7
SMCO2-206ENST00000543991 ZSCAN29Q8IWY8 852 aaPredicted RBP10.67□□□□□ -0.7
SMCO2-206ENST00000543991 BCL2L13Q9BXK5 485 aa10.67□□□□□ -0.7
SMCO2-206ENST00000543991 MPSTP25325 297 aa10.66□□□□□ -0.7
SMCO2-206ENST00000543991 HIRAP54198 1017 aaPredicted RBP10.66□□□□□ -0.7
SMCO2-206ENST00000543991 RELBQ01201 579 aa10.66□□□□□ -0.7
SMCO2-206ENST00000543991 MYO19Q96H55 970 aa10.66□□□□□ -0.7
SMCO2-206ENST00000543991 QTRT2Q9H974 415 aaKnown RBP10.66□□□□□ -0.7
SMCO2-206ENST00000543991 TOR4AQ9NXH8 423 aa10.66□□□□□ -0.7
SMCO2-206ENST00000543991 STIM2Q9P246 746 aa10.66□□□□□ -0.7
SMCO2-206ENST00000543991 UNCXA6NJT0 531 aa10.65□□□□□ -0.7
SMCO2-206ENST00000543991 EML1O00423 815 aa10.65□□□□□ -0.7
SMCO2-206ENST00000543991 NOS2P35228 1153 aa10.65□□□□□ -0.7
SMCO2-206ENST00000543991 PPARGC1BQ86YN6 1023 aaKnown RBP10.65□□□□□ -0.7
SMCO2-206ENST00000543991 TNFRSF10BO14763 440 aa10.64□□□□□ -0.71
SMCO2-206ENST00000543991 SMPD1P17405 629 aa10.64□□□□□ -0.71
SMCO2-206ENST00000543991 ALKBH2Q6NS38 261 aa10.64□□□□□ -0.71
SMCO2-206ENST00000543991 ZNF295-AS1Q8N0V1 137 aa10.64□□□□□ -0.71
SMCO2-206ENST00000543991 ZDHHC1Q8WTX9 485 aa10.64□□□□□ -0.71
SMCO2-206ENST00000543991 ZSCAN10Q96SZ4 725 aaPredicted RBP10.64□□□□□ -0.71
SMCO2-206ENST00000543991 ZNF395Q9H8N7 513 aaPredicted RBP10.64□□□□□ -0.71
SMCO2-206ENST00000543991 CABP1Q9NZU7 370 aa10.64□□□□□ -0.71
SMCO2-206ENST00000543991 TNFRSF10AO00220 468 aa10.63□□□□□ -0.71
SMCO2-206ENST00000543991 ZNF16P17020 682 aaPredicted RBP10.63□□□□□ -0.71
SMCO2-206ENST00000543991 RGL4Q8IZJ4 473 aa10.63□□□□□ -0.71
SMCO2-206ENST00000543991 L3MBTL2Q969R5 705 aa10.63□□□□□ -0.71
SMCO2-206ENST00000543991 LRFN2Q9ULH4 789 aa10.63□□□□□ -0.71
SMCO2-206ENST00000543991 ZNF232Q9UNY5 417 aa10.63□□□□□ -0.71
SMCO2-206ENST00000543991 NCAPD3P42695 1498 aa10.62□□□□□ -0.71
SMCO2-206ENST00000543991 GTF2E1P29083 439 aaPredicted RBP10.62□□□□□ -0.71
SMCO2-206ENST00000543991 EIF1AXP47813 144 aaKnown RBP10.62□□□□□ -0.71
SMCO2-206ENST00000543991 COL19A1Q14993 1142 aa10.62□□□□□ -0.71
SMCO2-206ENST00000543991 MEIOBQ8N635 442 aa10.62□□□□□ -0.71
SMCO2-206ENST00000543991 GIPC2Q8TF65 315 aa10.62□□□□□ -0.71
SMCO2-206ENST00000543991 NGLY1Q96IV0 654 aa10.62□□□□□ -0.71
SMCO2-206ENST00000543991 NIFKQ9BYG3 293 aaKnown RBP10.62□□□□□ -0.71
SMCO2-206ENST00000543991 RBCK1Q9BYM8 510 aa10.62□□□□□ -0.71
SMCO2-206ENST00000543991 ZCCHC6Q5VYS8 1495 aaKnown RBP10.61□□□□□ -0.71
SMCO2-206ENST00000543991 NDUFB5O43674 189 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 GPC1P35052 558 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 PRR20EP86478 221 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 PRR20CP86479 221 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 PRR20DP86480 221 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 PRR20BP86481 221 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 PRR20AP86496 221 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 SH3PXD2AQ5TCZ1 1133 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 TMEM214Q6NUQ4 689 aaKnown RBP10.61□□□□□ -0.71
SMCO2-206ENST00000543991 ALDH16A1Q8IZ83 802 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 ABTB2Q8N961 1025 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 BRPF3Q9ULD4 1205 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 HCN4Q9Y3Q4 1203 aa10.61□□□□□ -0.71
SMCO2-206ENST00000543991 BRD2P25440 801 aaKnown RBP10.6□□□□□ -0.71
SMCO2-206ENST00000543991 RTN1Q16799 776 aa10.6□□□□□ -0.71
SMCO2-206ENST00000543991 ZNF326Q5BKZ1 582 aaKnown RBP10.6□□□□□ -0.71
SMCO2-206ENST00000543991 RHBDD1Q8TEB9 315 aa10.6□□□□□ -0.71
SMCO2-206ENST00000543991 CITED4Q96RK1 184 aa10.6□□□□□ -0.71
SMCO2-206ENST00000543991 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
SMCO2-206ENST00000543991 THOC2Q8NI27 1593 aaKnown RBP10.6□□□□□ -0.71
SMCO2-206ENST00000543991 AAMPQ13685 434 aa10.59□□□□□ -0.71
SMCO2-206ENST00000543991 C11orf91Q3C1V1 193 aa10.59□□□□□ -0.71
SMCO2-206ENST00000543991 FBXO33Q7Z6M2 555 aa10.59□□□□□ -0.71
SMCO2-206ENST00000543991 TSEN34Q9BSV6 310 aaKnown RBP10.59□□□□□ -0.71
SMCO2-206ENST00000543991 GRIP2Q9C0E4 1043 aa10.59□□□□□ -0.71
SMCO2-206ENST00000543991 FZD6O60353 706 aa10.58□□□□□ -0.72
SMCO2-206ENST00000543991 C1orf53Q5VUE5 145 aa10.58□□□□□ -0.72
SMCO2-206ENST00000543991 TRIM67Q6ZTA4 783 aa10.58□□□□□ -0.72
SMCO2-206ENST00000543991 TMC7Q7Z402 723 aa10.58□□□□□ -0.72
SMCO2-206ENST00000543991 HPS1Q92902 700 aa10.58□□□□□ -0.72
SMCO2-206ENST00000543991 PHACTR1Q9C0D0 580 aa10.58□□□□□ -0.72
SMCO2-206ENST00000543991 NESP48681 1621 aa10.58□□□□□ -0.72
SMCO2-206ENST00000543991 RNF144AP50876 292 aaPredicted RBP10.57□□□□□ -0.72
SMCO2-206ENST00000543991 GNASQ5JWF2 1037 aa10.57□□□□□ -0.72
SMCO2-206ENST00000543991 SLC27A3Q5K4L6 730 aa10.57□□□□□ -0.72
SMCO2-206ENST00000543991 MRRFQ96E11 262 aaKnown RBP10.57□□□□□ -0.72
SMCO2-206ENST00000543991 CCDC87Q9NVE4 849 aa10.57□□□□□ -0.72
SMCO2-206ENST00000543991 ZBTB39O15060 712 aa10.56□□□□□ -0.72
SMCO2-206ENST00000543991 DGKZQ13574 1117 aa10.56□□□□□ -0.72
SMCO2-206ENST00000543991 KIAA1522Q9P206 1035 aaPredicted RBP10.56□□□□□ -0.72
SMCO2-206ENST00000543991 SPINT1O43278 529 aa10.55□□□□□ -0.72
SMCO2-206ENST00000543991 EAPPQ56P03 285 aaPredicted RBP10.55□□□□□ -0.72
SMCO2-206ENST00000543991 FAM26DQ5JW98 314 aa10.55□□□□□ -0.72
SMCO2-206ENST00000543991 INSM2Q96T92 566 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms