RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 RNF181Q9P0P0 153 aa30.58■■■□□ 2.49
CDKN3-207ENST00000543789 MRC1P22897 1456 aa30.57■■■□□ 2.48
CDKN3-207ENST00000543789 SCN11AQ9UI33 1791 aa30.56■■■□□ 2.48
CDKN3-207ENST00000543789 C16orf71Q8IYS4 520 aaPredicted RBP30.56■■■□□ 2.48
CDKN3-207ENST00000543789 COL15A1P39059 1388 aa30.55■■■□□ 2.48
CDKN3-207ENST00000543789 RBM46Q8TBY0 533 aaKnown RBP30.55■■■□□ 2.48
CDKN3-207ENST00000543789 KDM2BQ8NHM5 1336 aa30.54■■■□□ 2.48
CDKN3-207ENST00000543789 STARD3NLO95772 234 aa30.54■■■□□ 2.48
CDKN3-207ENST00000543789 TTC5Q8N0Z6 440 aa30.54■■■□□ 2.48
CDKN3-207ENST00000543789 BCL2L12Q9HB09 334 aa30.54■■■□□ 2.48
CDKN3-207ENST00000543789 SERPINB2P05120 415 aa30.53■■■□□ 2.48
CDKN3-207ENST00000543789 CANXP27824 592 aaKnown RBP30.53■■■□□ 2.48
CDKN3-207ENST00000543789 DNAJC5GQ8N7S2 189 aa30.52■■■□□ 2.48
CDKN3-207ENST00000543789 KCPQ6ZWJ8 1503 aa30.52■■■□□ 2.48
CDKN3-207ENST00000543789 BRCA1P38398 1863 aaKnown RBP30.51■■■□□ 2.47
CDKN3-207ENST00000543789 ADAMTS7Q9UKP4 1686 aa30.5■■■□□ 2.47
CDKN3-207ENST00000543789 U2SURPO15042 1029 aaKnown RBP30.5■■■□□ 2.47
CDKN3-207ENST00000543789 RRAGCQ9HB90 399 aa30.49■■■□□ 2.47
CDKN3-207ENST00000543789 A0A087WZG4 1122 aa30.48■■■□□ 2.47
CDKN3-207ENST00000543789 EIF5P55010 431 aaKnown RBP30.48■■■□□ 2.47
CDKN3-207ENST00000543789 TEFQ10587 303 aa30.48■■■□□ 2.47
CDKN3-207ENST00000543789 FSTL1Q12841 308 aa30.48■■■□□ 2.47
CDKN3-207ENST00000543789 CNGB1Q14028 1251 aaPredicted RBP30.48■■■□□ 2.47
CDKN3-207ENST00000543789 IL17REQ8NFR9 667 aa30.48■■■□□ 2.47
CDKN3-207ENST00000543789 GAS2L2Q8NHY3 880 aa30.48■■■□□ 2.47
CDKN3-207ENST00000543789 GNAT3A8MTJ3 354 aa30.47■■■□□ 2.47
CDKN3-207ENST00000543789 TTLL6Q8N841 843 aa30.47■■■□□ 2.47
CDKN3-207ENST00000543789 ZNF496Q96IT1 587 aaPredicted RBP30.47■■■□□ 2.47
CDKN3-207ENST00000543789 TEX13AQ9BXU3 409 aaPredicted RBP30.47■■■□□ 2.47
CDKN3-207ENST00000543789 ARFGEF1Q9Y6D6 1849 aa30.47■■■□□ 2.47
CDKN3-207ENST00000543789 ZNF790Q6PG37 636 aa30.46■■■□□ 2.47
CDKN3-207ENST00000543789 BICDL1Q6ZP65 573 aa30.46■■■□□ 2.47
CDKN3-207ENST00000543789 C2CD5Q86YS7 1000 aa30.46■■■□□ 2.47
CDKN3-207ENST00000543789 NPC1L1Q9UHC9 1359 aa30.45■■■□□ 2.47
CDKN3-207ENST00000543789 H0YIN7 160 aa30.45■■■□□ 2.47
CDKN3-207ENST00000543789 RASSF7Q02833 373 aa30.45■■■□□ 2.47
CDKN3-207ENST00000543789 LMNB1P20700 586 aa30.43■■■□□ 2.46
CDKN3-207ENST00000543789 ZC3H4Q9UPT8 1303 aaKnown RBP30.43■■■□□ 2.46
CDKN3-207ENST00000543789 HEG1Q9ULI3 1381 aa30.41■■■□□ 2.46
CDKN3-207ENST00000543789 TBC1D9BQ66K14 1250 aa30.4■■■□□ 2.46
CDKN3-207ENST00000543789 FMNL2Q96PY5 1086 aa30.39■■■□□ 2.46
CDKN3-207ENST00000543789 TBC1D2BQ9UPU7 963 aa30.39■■■□□ 2.46
CDKN3-207ENST00000543789 ZNF330Q9Y3S2 320 aaPredicted RBP30.39■■■□□ 2.46
CDKN3-207ENST00000543789 COL3A1P02461 1466 aaPredicted RBP30.38■■■□□ 2.45
CDKN3-207ENST00000543789 IL6STP40189 918 aaPredicted RBP30.38■■■□□ 2.45
CDKN3-207ENST00000543789 PRELPP51888 382 aa30.38■■■□□ 2.45
CDKN3-207ENST00000543789 GLTPD2A6NH11 291 aa30.37■■■□□ 2.45
CDKN3-207ENST00000543789 HTRA3P83110 453 aa30.37■■■□□ 2.45
CDKN3-207ENST00000543789 NPM2Q86SE8 214 aaKnown RBP30.37■■■□□ 2.45
CDKN3-207ENST00000543789 BRIP1Q9BX63 1249 aa30.37■■■□□ 2.45
CDKN3-207ENST00000543789 PDZRN3Q9UPQ7 1066 aa30.37■■■□□ 2.45
CDKN3-207ENST00000543789 CARMIL3Q8ND23 1372 aa30.37■■■□□ 2.45
CDKN3-207ENST00000543789 PDE6BP35913 854 aa30.36■■■□□ 2.45
CDKN3-207ENST00000543789 SMC1BQ8NDV3 1235 aa30.36■■■□□ 2.45
CDKN3-207ENST00000543789 ZNF622Q969S3 477 aaKnown RBP eCLIP30.36■■■□□ 2.45
CDKN3-207ENST00000543789 A1BGP04217 495 aa30.35■■■□□ 2.45
CDKN3-207ENST00000543789 KLRG1Q96E93 195 aa30.35■■■□□ 2.45
CDKN3-207ENST00000543789 PHACTR3Q96KR7 559 aa30.35■■■□□ 2.45
CDKN3-207ENST00000543789 NRXN2Q9P2S2 1712 aa30.34■■■□□ 2.45
CDKN3-207ENST00000543789 BTBD11A6QL63 1104 aa30.34■■■□□ 2.45
CDKN3-207ENST00000543789 VEGFAP15692 232 aaPredicted RBP30.34■■■□□ 2.45
CDKN3-207ENST00000543789 CFAP53Q96M91 514 aa30.34■■■□□ 2.45
CDKN3-207ENST00000543789 NFKBIEO00221 500 aa30.33■■■□□ 2.45
CDKN3-207ENST00000543789 PRKAR2BP31323 418 aa30.33■■■□□ 2.45
CDKN3-207ENST00000543789 PRR5LQ6MZQ0 368 aa30.33■■■□□ 2.45
CDKN3-207ENST00000543789 CEMIPQ8WUJ3 1361 aa30.32■■■□□ 2.44
CDKN3-207ENST00000543789 KCNQ3O43525 872 aa30.32■■■□□ 2.44
CDKN3-207ENST00000543789 CCDC24Q8N4L8 307 aa30.32■■■□□ 2.44
CDKN3-207ENST00000543789 SETDB2Q96T68 719 aa30.32■■■□□ 2.44
CDKN3-207ENST00000543789 AFDNP55196 1824 aaKnown RBP30.31■■■□□ 2.44
CDKN3-207ENST00000543789 RSPH6AQ9H0K4 717 aa30.31■■■□□ 2.44
CDKN3-207ENST00000543789 UBR2Q8IWV8 1755 aa30.31■■■□□ 2.44
CDKN3-207ENST00000543789 NUDCQ9Y266 331 aa30.3■■■□□ 2.44
CDKN3-207ENST00000543789 C21orf2O43822 256 aa30.29■■■□□ 2.44
CDKN3-207ENST00000543789 CAMTA2O94983 1202 aa30.29■■■□□ 2.44
CDKN3-207ENST00000543789 NPHP1O15259 732 aa30.28■■■□□ 2.44
CDKN3-207ENST00000543789 DPY19L2Q6NUT2 758 aa30.28■■■□□ 2.44
CDKN3-207ENST00000543789 JMYQ8N9B5 988 aa30.28■■■□□ 2.44
CDKN3-207ENST00000543789 ZNF219Q9P2Y4 722 aaPredicted RBP30.28■■■□□ 2.44
CDKN3-207ENST00000543789 SBF1O95248 1867 aa30.27■■■□□ 2.44
CDKN3-207ENST00000543789 CNBD1Q8NA66 436 aa30.27■■■□□ 2.44
CDKN3-207ENST00000543789 USP16Q9Y5T5 823 aa30.27■■■□□ 2.44
CDKN3-207ENST00000543789 DZIP3Q86Y13 1208 aaKnown RBP30.26■■■□□ 2.43
CDKN3-207ENST00000543789 RTF1Q92541 710 aaKnown RBP30.25■■■□□ 2.43
CDKN3-207ENST00000543789 VIRMAQ69YN4 1812 aaKnown RBP30.24■■■□□ 2.43
CDKN3-207ENST00000543789 U2AF1L5P0DN76 240 aaPredicted RBP30.24■■■□□ 2.43
CDKN3-207ENST00000543789 ST5P78524 1137 aa30.24■■■□□ 2.43
CDKN3-207ENST00000543789 U2AF1Q01081 240 aaKnown RBP eCLIP30.24■■■□□ 2.43
CDKN3-207ENST00000543789 ERFEQ4G0M1 354 aa30.24■■■□□ 2.43
CDKN3-207ENST00000543789 CNKSR1Q969H4 720 aa30.24■■■□□ 2.43
CDKN3-207ENST00000543789 TNRC6CQ9HCJ0 1690 aaKnown RBP30.23■■■□□ 2.43
CDKN3-207ENST00000543789 WDR90Q96KV7 1748 aa30.22■■■□□ 2.43
CDKN3-207ENST00000543789 SNRPA1P09661 255 aaKnown RBP30.22■■■□□ 2.43
CDKN3-207ENST00000543789 STYK1Q6J9G0 422 aa30.22■■■□□ 2.43
CDKN3-207ENST00000543789 POTECB2RU33 542 aa30.21■■■□□ 2.43
CDKN3-207ENST00000543789 PIP4K2AP48426 406 aaPredicted RBP30.21■■■□□ 2.43
CDKN3-207ENST00000543789 CLEC4GQ6UXB4 293 aa30.21■■■□□ 2.43
CDKN3-207ENST00000543789 MCM10Q7L590 875 aa30.21■■■□□ 2.43
CDKN3-207ENST00000543789 PRAMEF22A3QJZ6 481 aa30.2■■■□□ 2.43
CDKN3-207ENST00000543789 SRGNP10124 158 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms