RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 AFDNP55196 1824 aaKnown RBP21.85■■□□□ 1.09
SPPL3-207ENST00000543608 ZNF526Q8TF50 670 aaPredicted RBP21.85■■□□□ 1.09
SPPL3-207ENST00000543608 ZPR1O75312 459 aa21.84■■□□□ 1.09
SPPL3-207ENST00000543608 VSIG10Q8N0Z9 540 aa21.84■■□□□ 1.09
SPPL3-207ENST00000543608 ZNF496Q96IT1 587 aaPredicted RBP21.84■■□□□ 1.09
SPPL3-207ENST00000543608 SENP3-EIF4A1A0A087X0R7 540 aa21.83■■□□□ 1.09
SPPL3-207ENST00000543608 POLRMTO00411 1230 aaKnown RBP21.83■■□□□ 1.09
SPPL3-207ENST00000543608 CANXP27824 592 aaKnown RBP21.83■■□□□ 1.09
SPPL3-207ENST00000543608 CEMIPQ8WUJ3 1361 aa21.83■■□□□ 1.08
SPPL3-207ENST00000543608 ARFGEF1Q9Y6D6 1849 aa21.83■■□□□ 1.08
SPPL3-207ENST00000543608 U2AF1L5P0DN76 240 aaPredicted RBP21.82■■□□□ 1.08
SPPL3-207ENST00000543608 U2AF1Q01081 240 aaKnown RBP eCLIP21.82■■□□□ 1.08
SPPL3-207ENST00000543608 ZNF790Q6PG37 636 aa21.82■■□□□ 1.08
SPPL3-207ENST00000543608 HEG1Q9ULI3 1381 aa21.82■■□□□ 1.08
SPPL3-207ENST00000543608 KCNA3P22001 575 aa21.81■■□□□ 1.08
SPPL3-207ENST00000543608 BCL2L12Q9HB09 334 aa21.81■■□□□ 1.08
SPPL3-207ENST00000543608 NARFQ9UHQ1 456 aa21.81■■□□□ 1.08
SPPL3-207ENST00000543608 NUDCQ9Y266 331 aa21.81■■□□□ 1.08
SPPL3-207ENST00000543608 SCN7AQ01118 1682 aa21.81■■□□□ 1.08
SPPL3-207ENST00000543608 NRXN2Q9P2S2 1712 aa21.8■■□□□ 1.08
SPPL3-207ENST00000543608 FCHSD2O94868 740 aa21.8■■□□□ 1.08
SPPL3-207ENST00000543608 TM4SF1P30408 202 aa21.8■■□□□ 1.08
SPPL3-207ENST00000543608 GPBP1L1Q9HC44 474 aaPredicted RBP21.8■■□□□ 1.08
SPPL3-207ENST00000543608 KCNQ3O43525 872 aa21.79■■□□□ 1.08
SPPL3-207ENST00000543608 CHRNA5P30532 468 aa21.79■■□□□ 1.08
SPPL3-207ENST00000543608 NFIXQ14938 502 aa21.79■■□□□ 1.08
SPPL3-207ENST00000543608 ZNF330Q9Y3S2 320 aaPredicted RBP21.78■■□□□ 1.08
SPPL3-207ENST00000543608 STARD3NLO95772 234 aa21.77■■□□□ 1.08
SPPL3-207ENST00000543608 ARHGAP27Q6ZUM4 889 aa21.77■■□□□ 1.08
SPPL3-207ENST00000543608 MCM10Q7L590 875 aa21.77■■□□□ 1.08
SPPL3-207ENST00000543608 BTBD11A6QL63 1104 aa21.76■■□□□ 1.07
SPPL3-207ENST00000543608 EIF5P55010 431 aaKnown RBP21.76■■□□□ 1.07
SPPL3-207ENST00000543608 FMNL2Q96PY5 1086 aa21.76■■□□□ 1.07
SPPL3-207ENST00000543608 CARMIL3Q8ND23 1372 aa21.75■■□□□ 1.07
SPPL3-207ENST00000543608 DLEC1Q9Y238 1755 aa21.75■■□□□ 1.07
SPPL3-207ENST00000543608 DCTN1Q14203 1278 aa21.75■■□□□ 1.07
SPPL3-207ENST00000543608 PIM2Q9P1W9 311 aa21.75■■□□□ 1.07
SPPL3-207ENST00000543608 DLG5Q8TDM6 1919 aa21.74■■□□□ 1.07
SPPL3-207ENST00000543608 BICDL1Q6ZP65 573 aa21.74■■□□□ 1.07
SPPL3-207ENST00000543608 A1BGP04217 495 aa21.73■■□□□ 1.07
SPPL3-207ENST00000543608 DALRD3Q5D0E6 543 aaKnown RBP21.73■■□□□ 1.07
SPPL3-207ENST00000543608 RTF1Q92541 710 aaKnown RBP21.73■■□□□ 1.07
SPPL3-207ENST00000543608 BCORQ6W2J9 1755 aa21.73■■□□□ 1.07
SPPL3-207ENST00000543608 PRAMEF22A3QJZ6 481 aa21.72■■□□□ 1.07
SPPL3-207ENST00000543608 SERPINB2P05120 415 aa21.72■■□□□ 1.07
SPPL3-207ENST00000543608 PIP4K2AP48426 406 aaPredicted RBP21.72■■□□□ 1.07
SPPL3-207ENST00000543608 TEX13AQ9BXU3 409 aaPredicted RBP21.72■■□□□ 1.07
SPPL3-207ENST00000543608 TBC1D2BQ9UPU7 963 aa21.72■■□□□ 1.07
SPPL3-207ENST00000543608 ANKRD31Q8N7Z5 1873 aa21.72■■□□□ 1.07
SPPL3-207ENST00000543608 A0A087WZG4 1122 aa21.7■■□□□ 1.06
SPPL3-207ENST00000543608 TBC1D9BQ66K14 1250 aa21.7■■□□□ 1.06
SPPL3-207ENST00000543608 COL11A2P13942 1736 aaPredicted RBP21.69■■□□□ 1.06
SPPL3-207ENST00000543608 IL6STP40189 918 aaPredicted RBP21.69■■□□□ 1.06
SPPL3-207ENST00000543608 USP16Q9Y5T5 823 aa21.69■■□□□ 1.06
SPPL3-207ENST00000543608 C9orf131Q5VYM1 1079 aa21.68■■□□□ 1.06
SPPL3-207ENST00000543608 SBF1O95248 1867 aa21.68■■□□□ 1.06
SPPL3-207ENST00000543608 KIF3CO14782 793 aa21.67■■□□□ 1.06
SPPL3-207ENST00000543608 CCDC24Q8N4L8 307 aa21.67■■□□□ 1.06
SPPL3-207ENST00000543608 LAMB4A4D0S4 1761 aa21.66■■□□□ 1.06
SPPL3-207ENST00000543608 KDM3BQ7LBC6 1761 aa21.66■■□□□ 1.06
SPPL3-207ENST00000543608 CAMTA2O94983 1202 aa21.65■■□□□ 1.06
SPPL3-207ENST00000543608 RASSF7Q02833 373 aa21.65■■□□□ 1.06
SPPL3-207ENST00000543608 C2CD5Q86YS7 1000 aa21.65■■□□□ 1.06
SPPL3-207ENST00000543608 MIS18AQ9NYP9 233 aa21.65■■□□□ 1.06
SPPL3-207ENST00000543608 HTATSF1O43719 755 aaKnown RBP21.64■■□□□ 1.05
SPPL3-207ENST00000543608 DZIP3Q86Y13 1208 aaKnown RBP21.64■■□□□ 1.05
SPPL3-207ENST00000543608 CEP350Q5VT06 3117 aa21.63■■□□□ 1.05
SPPL3-207ENST00000543608 SNRPA1P09661 255 aaKnown RBP21.63■■□□□ 1.05
SPPL3-207ENST00000543608 PRR5LQ6MZQ0 368 aa21.63■■□□□ 1.05
SPPL3-207ENST00000543608 NPM2Q86SE8 214 aaKnown RBP21.63■■□□□ 1.05
SPPL3-207ENST00000543608 PLEKHF1Q96S99 279 aa21.63■■□□□ 1.05
SPPL3-207ENST00000543608 NMRK2Q9NPI5 230 aa21.63■■□□□ 1.05
SPPL3-207ENST00000543608 RNF181Q9P0P0 153 aa21.63■■□□□ 1.05
SPPL3-207ENST00000543608 CACNA1SQ13698 1873 aa21.62■■□□□ 1.05
SPPL3-207ENST00000543608 THUMPD2Q9BTF0 503 aaKnown RBP21.62■■□□□ 1.05
SPPL3-207ENST00000543608 NEFMP07197 916 aa21.61■■□□□ 1.05
SPPL3-207ENST00000543608 TAF7Q15545 349 aaPredicted RBP21.61■■□□□ 1.05
SPPL3-207ENST00000543608 NBPF26B4DH59 902 aa21.6■■□□□ 1.05
SPPL3-207ENST00000543608 H0YIN7 160 aa21.6■■□□□ 1.05
SPPL3-207ENST00000543608 NBPF10Q6P3W6 841 aaKnown RBP21.6■■□□□ 1.05
SPPL3-207ENST00000543608 NBPF15Q8N660 670 aa21.6■■□□□ 1.05
SPPL3-207ENST00000543608 TTLL6Q8N841 843 aa21.6■■□□□ 1.05
SPPL3-207ENST00000543608 TIAM2Q8IVF5 1701 aa21.6■■□□□ 1.05
SPPL3-207ENST00000543608 CCDC88AQ3V6T2 1871 aa21.6■■□□□ 1.05
SPPL3-207ENST00000543608 NFE2L2Q16236 605 aa21.59■■□□□ 1.05
SPPL3-207ENST00000543608 CNBD1Q8NA66 436 aa21.59■■□□□ 1.05
SPPL3-207ENST00000543608 SETDB2Q96T68 719 aa21.59■■□□□ 1.05
SPPL3-207ENST00000543608 PRELPP51888 382 aa21.58■■□□□ 1.05
SPPL3-207ENST00000543608 MAPK8IP3Q9UPT6 1336 aa21.57■■□□□ 1.04
SPPL3-207ENST00000543608 NPHP1O15259 732 aa21.57■■□□□ 1.04
SPPL3-207ENST00000543608 HSPA6P17066 643 aa21.57■■□□□ 1.04
SPPL3-207ENST00000543608 DDX10Q13206 875 aaKnown RBP21.57■■□□□ 1.04
SPPL3-207ENST00000543608 ZNF622Q969S3 477 aaKnown RBP eCLIP21.57■■□□□ 1.04
SPPL3-207ENST00000543608 BRIP1Q9BX63 1249 aa21.57■■□□□ 1.04
SPPL3-207ENST00000543608 ZNF219Q9P2Y4 722 aaPredicted RBP21.57■■□□□ 1.04
SPPL3-207ENST00000543608 PDE6BP35913 854 aa21.56■■□□□ 1.04
SPPL3-207ENST00000543608 TNRC6CQ9HCJ0 1690 aaKnown RBP21.56■■□□□ 1.04
SPPL3-207ENST00000543608 NFKBIEO00221 500 aa21.55■■□□□ 1.04
SPPL3-207ENST00000543608 ARFGEF2Q9Y6D5 1785 aa21.55■■□□□ 1.04
SPPL3-207ENST00000543608 SLX4Q8IY92 1834 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms