RNA–Protein interactions for RNA: ENST00000543575.5

PDE2A-223, Transcript of phosphodiesterase 2A, human

TSL 4

Gene PDE2A, Length 544 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE2A-223	ENST00000543575	USPL1	Q5W0Q7	1092 aa		33.43	■■■□□ 2.94
PDE2A-223	ENST00000543575	ZNF496	Q96IT1	587 aa	Predicted RBP	33.43	■■■□□ 2.94
PDE2A-223	ENST00000543575	ADCY9	O60503	1353 aa		33.43	■■■□□ 2.94
PDE2A-223	ENST00000543575		A0A0G2JLW4	131 aa		33.42	■■■□□ 2.94
PDE2A-223	ENST00000543575	BRCA1	P38398	1863 aa	Known RBP	33.42	■■■□□ 2.94
PDE2A-223	ENST00000543575	FCHSD2	O94868	740 aa		33.41	■■■□□ 2.94
PDE2A-223	ENST00000543575	STARD3NL	O95772	234 aa		33.41	■■■□□ 2.94
PDE2A-223	ENST00000543575	DPEP1	P16444	411 aa		33.4	■■■□□ 2.94
PDE2A-223	ENST00000543575	NARF	Q9UHQ1	456 aa		33.4	■■■□□ 2.94
PDE2A-223	ENST00000543575	POLRMT	O00411	1230 aa	Known RBP	33.39	■■■□□ 2.94
PDE2A-223	ENST00000543575	GIGYF1	O75420	1035 aa	Predicted RBP	33.38	■■■□□ 2.93
PDE2A-223	ENST00000543575	CANX	P27824	592 aa	Known RBP	33.38	■■■□□ 2.93
PDE2A-223	ENST00000543575	BCS1L	Q9Y276	419 aa		33.38	■■■□□ 2.93
PDE2A-223	ENST00000543575	TM4SF1	P30408	202 aa		33.37	■■■□□ 2.93
PDE2A-223	ENST00000543575	FMNL2	Q96PY5	1086 aa		33.37	■■■□□ 2.93
PDE2A-223	ENST00000543575	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.36	■■■□□ 2.93
PDE2A-223	ENST00000543575	BTBD11	A6QL63	1104 aa		33.35	■■■□□ 2.93
PDE2A-223	ENST00000543575	RTF1	Q92541	710 aa	Known RBP	33.35	■■■□□ 2.93
PDE2A-223	ENST00000543575	SCN7A	Q01118	1682 aa		33.35	■■■□□ 2.93
PDE2A-223	ENST00000543575	C1QTNF8	P60827	252 aa		33.34	■■■□□ 2.93
PDE2A-223	ENST00000543575	NRXN2	Q9P2S2	1712 aa		33.33	■■■□□ 2.93
PDE2A-223	ENST00000543575	EIF5	P55010	431 aa	Known RBP	33.33	■■■□□ 2.93
PDE2A-223	ENST00000543575	NFIX	Q14938	502 aa		33.33	■■■□□ 2.93
PDE2A-223	ENST00000543575	BCL2L12	Q9HB09	334 aa		33.33	■■■□□ 2.93
PDE2A-223	ENST00000543575	AFDN	P55196	1824 aa	Known RBP	33.32	■■■□□ 2.92
PDE2A-223	ENST00000543575	ARFGEF1	Q9Y6D6	1849 aa		33.31	■■■□□ 2.92
PDE2A-223	ENST00000543575		A0A087WZG4	1122 aa		33.31	■■■□□ 2.92
PDE2A-223	ENST00000543575	KCNQ3	O43525	872 aa		33.31	■■■□□ 2.92
PDE2A-223	ENST00000543575	MCM10	Q7L590	875 aa		33.31	■■■□□ 2.92
PDE2A-223	ENST00000543575	KCNA3	P22001	575 aa		33.3	■■■□□ 2.92
PDE2A-223	ENST00000543575	HTATSF1	O43719	755 aa	Known RBP	33.28	■■■□□ 2.92
PDE2A-223	ENST00000543575	PIM2	Q9P1W9	311 aa		33.28	■■■□□ 2.92
PDE2A-223	ENST00000543575	GPBP1L1	Q9HC44	474 aa	Predicted RBP	33.27	■■■□□ 2.92
PDE2A-223	ENST00000543575	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.27	■■■□□ 2.92
PDE2A-223	ENST00000543575	NEFM	P07197	916 aa		33.26	■■■□□ 2.91
PDE2A-223	ENST00000543575	IL6ST	P40189	918 aa	Predicted RBP	33.26	■■■□□ 2.91
PDE2A-223	ENST00000543575	DCTN1	Q14203	1278 aa		33.26	■■■□□ 2.91
PDE2A-223	ENST00000543575	CHRNA5	P30532	468 aa		33.25	■■■□□ 2.91
PDE2A-223	ENST00000543575	SERPINB2	P05120	415 aa		33.24	■■■□□ 2.91
PDE2A-223	ENST00000543575	DALRD3	Q5D0E6	543 aa	Known RBP	33.24	■■■□□ 2.91
PDE2A-223	ENST00000543575	ARHGAP27	Q6ZUM4	889 aa		33.24	■■■□□ 2.91
PDE2A-223	ENST00000543575	ZNF526	Q8TF50	670 aa	Predicted RBP	33.24	■■■□□ 2.91
PDE2A-223	ENST00000543575	A1BG	P04217	495 aa		33.23	■■■□□ 2.91
PDE2A-223	ENST00000543575	DLG5	Q8TDM6	1919 aa		33.23	■■■□□ 2.91
PDE2A-223	ENST00000543575	BCOR	Q6W2J9	1755 aa		33.22	■■■□□ 2.91
PDE2A-223	ENST00000543575	DLEC1	Q9Y238	1755 aa		33.21	■■■□□ 2.91
PDE2A-223	ENST00000543575	BICDL1	Q6ZP65	573 aa		33.21	■■■□□ 2.91
PDE2A-223	ENST00000543575	TBC1D2B	Q9UPU7	963 aa		33.21	■■■□□ 2.91
PDE2A-223	ENST00000543575	SENP3-EIF4A1	A0A087X0R7	540 aa		33.2	■■■□□ 2.91
PDE2A-223	ENST00000543575	NPM2	Q86SE8	214 aa	Known RBP	33.2	■■■□□ 2.91
PDE2A-223	ENST00000543575	CARMIL3	Q8ND23	1372 aa		33.2	■■■□□ 2.9
PDE2A-223	ENST00000543575	SNRPA1	P09661	255 aa	Known RBP	33.19	■■■□□ 2.9
PDE2A-223	ENST00000543575	PLEKHF1	Q96S99	279 aa		33.19	■■■□□ 2.9
PDE2A-223	ENST00000543575	PRAMEF22	A3QJZ6	481 aa		33.18	■■■□□ 2.9
PDE2A-223	ENST00000543575	TBC1D9B	Q66K14	1250 aa		33.18	■■■□□ 2.9
PDE2A-223	ENST00000543575	USP16	Q9Y5T5	823 aa		33.18	■■■□□ 2.9
PDE2A-223	ENST00000543575	RALBP1	Q15311	655 aa		33.17	■■■□□ 2.9
PDE2A-223	ENST00000543575	LAMB4	A4D0S4	1761 aa		33.16	■■■□□ 2.9
PDE2A-223	ENST00000543575	TAF7	Q15545	349 aa	Predicted RBP	33.16	■■■□□ 2.9
PDE2A-223	ENST00000543575	KDM3B	Q7LBC6	1761 aa		33.16	■■■□□ 2.9
PDE2A-223	ENST00000543575	CAMTA2	O94983	1202 aa		33.15	■■■□□ 2.9
PDE2A-223	ENST00000543575	NFE2L2	Q16236	605 aa		33.15	■■■□□ 2.9
PDE2A-223	ENST00000543575	MAPK8IP3	Q9UPT6	1336 aa		33.15	■■■□□ 2.9
PDE2A-223	ENST00000543575	PIP4K2A	P48426	406 aa	Predicted RBP	33.14	■■■□□ 2.9
PDE2A-223	ENST00000543575	DZIP3	Q86Y13	1208 aa	Known RBP	33.14	■■■□□ 2.9
PDE2A-223	ENST00000543575	PNN	Q9H307	717 aa	Known RBP	33.14	■■■□□ 2.9
PDE2A-223	ENST00000543575	ANKRD31	Q8N7Z5	1873 aa		33.12	■■■□□ 2.89
PDE2A-223	ENST00000543575	DDX10	Q13206	875 aa	Known RBP	33.11	■■■□□ 2.89
PDE2A-223	ENST00000543575	C2CD5	Q86YS7	1000 aa		33.11	■■■□□ 2.89
PDE2A-223	ENST00000543575	C9orf131	Q5VYM1	1079 aa		33.1	■■■□□ 2.89
PDE2A-223	ENST00000543575	PNISR	Q8TF01	805 aa	Known RBP	33.1	■■■□□ 2.89
PDE2A-223	ENST00000543575	MIS18A	Q9NYP9	233 aa		33.1	■■■□□ 2.89
PDE2A-223	ENST00000543575	COL11A2	P13942	1736 aa	Predicted RBP	33.08	■■■□□ 2.89
PDE2A-223	ENST00000543575	PRR5L	Q6MZQ0	368 aa		33.08	■■■□□ 2.89
PDE2A-223	ENST00000543575		H0YIN7	160 aa		33.07	■■■□□ 2.88
PDE2A-223	ENST00000543575	SETDB2	Q96T68	719 aa		33.07	■■■□□ 2.88
PDE2A-223	ENST00000543575	THUMPD2	Q9BTF0	503 aa	Known RBP	33.07	■■■□□ 2.88
PDE2A-223	ENST00000543575	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.06	■■■□□ 2.88
PDE2A-223	ENST00000543575	NBPF26	B4DH59	902 aa		33.06	■■■□□ 2.88
PDE2A-223	ENST00000543575	NBPF10	Q6P3W6	841 aa	Known RBP	33.06	■■■□□ 2.88
PDE2A-223	ENST00000543575	NBPF15	Q8N660	670 aa		33.06	■■■□□ 2.88
PDE2A-223	ENST00000543575	TTLL6	Q8N841	843 aa		33.06	■■■□□ 2.88
PDE2A-223	ENST00000543575	KIF3C	O14782	793 aa		33.05	■■■□□ 2.88
PDE2A-223	ENST00000543575	CNBD1	Q8NA66	436 aa		33.05	■■■□□ 2.88
PDE2A-223	ENST00000543575	BRIP1	Q9BX63	1249 aa		33.05	■■■□□ 2.88
PDE2A-223	ENST00000543575	RNF181	Q9P0P0	153 aa		33.04	■■■□□ 2.88
PDE2A-223	ENST00000543575	ZNF652	Q9Y2D9	606 aa		33.04	■■■□□ 2.88
PDE2A-223	ENST00000543575	PDE6B	P35913	854 aa		33.03	■■■□□ 2.88
PDE2A-223	ENST00000543575	CCDC24	Q8N4L8	307 aa		33.03	■■■□□ 2.88
PDE2A-223	ENST00000543575	PDZRN3	Q9UPQ7	1066 aa		33.03	■■■□□ 2.88
PDE2A-223	ENST00000543575	SBF1	O95248	1867 aa		33.02	■■■□□ 2.88
PDE2A-223	ENST00000543575	NPHP1	O15259	732 aa		33.02	■■■□□ 2.88
PDE2A-223	ENST00000543575	CLEC4G	Q6UXB4	293 aa		33.02	■■■□□ 2.88
PDE2A-223	ENST00000543575	RGL2	O15211	777 aa		33	■■■□□ 2.87
PDE2A-223	ENST00000543575	EIF4A1	P60842	406 aa	Known RBP	33	■■■□□ 2.87
PDE2A-223	ENST00000543575	ST5	P78524	1137 aa		33	■■■□□ 2.87
PDE2A-223	ENST00000543575	RASSF7	Q02833	373 aa		33	■■■□□ 2.87
PDE2A-223	ENST00000543575	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.98	■■■□□ 2.87
PDE2A-223	ENST00000543575	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.96	■■■□□ 2.87
PDE2A-223	ENST00000543575	NMRK2	Q9NPI5	230 aa		32.96	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms