RNA–Protein interactions for RNA: ENST00000543507.1

KDM5A-209, Transcript of lysine demethylase 5A, humanhuman

TSL 4

Gene KDM5A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-209ENST00000543507 NPM2Q86SE8 214 aaKnown RBP28.37■■■□□ 2.13
KDM5A-209ENST00000543507 NARFQ9UHQ1 456 aa28.37■■■□□ 2.13
KDM5A-209ENST00000543507 ZBTB1Q9Y2K1 713 aa28.37■■■□□ 2.13
KDM5A-209ENST00000543507 COL15A1P39059 1388 aa28.37■■■□□ 2.13
KDM5A-209ENST00000543507 C10orf71Q711Q0 1435 aa28.36■■■□□ 2.13
KDM5A-209ENST00000543507 FKBP8Q14318 412 aa28.36■■■□□ 2.13
KDM5A-209ENST00000543507 SIPA1L3O60292 1781 aaPredicted RBP28.34■■■□□ 2.13
KDM5A-209ENST00000543507 KIF13BQ9NQT8 1826 aa28.34■■■□□ 2.13
KDM5A-209ENST00000543507 CANXP27824 592 aaKnown RBP28.34■■■□□ 2.13
KDM5A-209ENST00000543507 USPL1Q5W0Q7 1092 aa28.34■■■□□ 2.13
KDM5A-209ENST00000543507 TM4SF1P30408 202 aa28.32■■■□□ 2.12
KDM5A-209ENST00000543507 PXDNLA1KZ92 1463 aa28.31■■■□□ 2.12
KDM5A-209ENST00000543507 EIF5P55010 431 aaKnown RBP28.3■■■□□ 2.12
KDM5A-209ENST00000543507 DDX10Q13206 875 aaKnown RBP28.3■■■□□ 2.12
KDM5A-209ENST00000543507 MCM10Q7L590 875 aa28.3■■■□□ 2.12
KDM5A-209ENST00000543507 MAPK8IP3Q9UPT6 1336 aa28.29■■■□□ 2.12
KDM5A-209ENST00000543507 A0A0G2JLW4 131 aa28.29■■■□□ 2.12
KDM5A-209ENST00000543507 IL6STP40189 918 aaPredicted RBP28.29■■■□□ 2.12
KDM5A-209ENST00000543507 POLRMTO00411 1230 aaKnown RBP28.28■■■□□ 2.12
KDM5A-209ENST00000543507 DDR1Q08345 913 aa28.28■■■□□ 2.12
KDM5A-209ENST00000543507 TAF7Q15545 349 aaPredicted RBP28.28■■■□□ 2.12
KDM5A-209ENST00000543507 SNRPA1P09661 255 aaKnown RBP28.27■■■□□ 2.12
KDM5A-209ENST00000543507 DPEP1P16444 411 aa28.27■■■□□ 2.12
KDM5A-209ENST00000543507 PNISRQ8TF01 805 aaKnown RBP28.27■■■□□ 2.12
KDM5A-209ENST00000543507 BCS1LQ9Y276 419 aa28.27■■■□□ 2.12
KDM5A-209ENST00000543507 PIM2Q9P1W9 311 aa28.26■■■□□ 2.11
KDM5A-209ENST00000543507 WWC3Q9ULE0 1092 aa28.26■■■□□ 2.11
KDM5A-209ENST00000543507 PLEKHF1Q96S99 279 aa28.25■■■□□ 2.11
KDM5A-209ENST00000543507 NFIXQ14938 502 aa28.24■■■□□ 2.11
KDM5A-209ENST00000543507 NFE2L2Q16236 605 aa28.24■■■□□ 2.11
KDM5A-209ENST00000543507 ZNF330Q9Y3S2 320 aaPredicted RBP28.24■■■□□ 2.11
KDM5A-209ENST00000543507 KCNQ3O43525 872 aa28.23■■■□□ 2.11
KDM5A-209ENST00000543507 DCTN1Q14203 1278 aa28.23■■■□□ 2.11
KDM5A-209ENST00000543507 MYBBP1AQ9BQG0 1328 aaKnown RBP28.22■■■□□ 2.11
KDM5A-209ENST00000543507 N4BP2Q86UW6 1770 aaPredicted RBP28.22■■■□□ 2.11
KDM5A-209ENST00000543507 KIAA1551Q9HCM1 1747 aa28.21■■■□□ 2.11
KDM5A-209ENST00000543507 A1BGP04217 495 aa28.21■■■□□ 2.11
KDM5A-209ENST00000543507 SERPINB2P05120 415 aa28.21■■■□□ 2.11
KDM5A-209ENST00000543507 BCL2L12Q9HB09 334 aa28.21■■■□□ 2.11
KDM5A-209ENST00000543507 GIGYF1O75420 1035 aaPredicted RBP28.19■■■□□ 2.1
KDM5A-209ENST00000543507 DALRD3Q5D0E6 543 aaKnown RBP28.19■■■□□ 2.1
KDM5A-209ENST00000543507 USP16Q9Y5T5 823 aa28.19■■■□□ 2.1
KDM5A-209ENST00000543507 KCNA3P22001 575 aa28.18■■■□□ 2.1
KDM5A-209ENST00000543507 TBC1D2BQ9UPU7 963 aa28.18■■■□□ 2.1
KDM5A-209ENST00000543507 UTRNP46939 3433 aa28.18■■■□□ 2.1
KDM5A-209ENST00000543507 ARHGAP27Q6ZUM4 889 aa28.17■■■□□ 2.1
KDM5A-209ENST00000543507 PDZRN3Q9UPQ7 1066 aa28.17■■■□□ 2.1
KDM5A-209ENST00000543507 BICDL1Q6ZP65 573 aa28.16■■■□□ 2.1
KDM5A-209ENST00000543507 ATP10DQ9P241 1426 aa28.16■■■□□ 2.1
KDM5A-209ENST00000543507 LMOD3Q0VAK6 560 aa28.15■■■□□ 2.1
KDM5A-209ENST00000543507 DZIP3Q86Y13 1208 aaKnown RBP28.15■■■□□ 2.1
KDM5A-209ENST00000543507 GPBP1L1Q9HC44 474 aaPredicted RBP28.15■■■□□ 2.1
KDM5A-209ENST00000543507 ZNF652Q9Y2D9 606 aa28.15■■■□□ 2.1
KDM5A-209ENST00000543507 SETDB2Q96T68 719 aa28.14■■■□□ 2.1
KDM5A-209ENST00000543507 ADCY9O60503 1353 aa28.13■■■□□ 2.09
KDM5A-209ENST00000543507 CARMIL3Q8ND23 1372 aa28.13■■■□□ 2.09
KDM5A-209ENST00000543507 NRXN2Q9P2S2 1712 aa28.13■■■□□ 2.09
KDM5A-209ENST00000543507 RGL2O15211 777 aa28.13■■■□□ 2.09
KDM5A-209ENST00000543507 C1QTNF8P60827 252 aa28.13■■■□□ 2.09
KDM5A-209ENST00000543507 TBC1D9BQ66K14 1250 aa28.13■■■□□ 2.09
KDM5A-209ENST00000543507 CLEC4GQ6UXB4 293 aa28.13■■■□□ 2.09
KDM5A-209ENST00000543507 BRCA1P38398 1863 aaKnown RBP28.12■■■□□ 2.09
KDM5A-209ENST00000543507 DLG5Q8TDM6 1919 aa28.12■■■□□ 2.09
KDM5A-209ENST00000543507 CAMTA2O94983 1202 aa28.12■■■□□ 2.09
KDM5A-209ENST00000543507 CHRNA5P30532 468 aa28.12■■■□□ 2.09
KDM5A-209ENST00000543507 SCN7AQ01118 1682 aa28.12■■■□□ 2.09
KDM5A-209ENST00000543507 H0YIN7 160 aa28.11■■■□□ 2.09
KDM5A-209ENST00000543507 NPHP1O15259 732 aa28.11■■■□□ 2.09
KDM5A-209ENST00000543507 RIPK4P57078 832 aa28.11■■■□□ 2.09
KDM5A-209ENST00000543507 WDR43Q15061 677 aaKnown RBP eCLIP28.11■■■□□ 2.09
KDM5A-209ENST00000543507 MIS18AQ9NYP9 233 aa28.11■■■□□ 2.09
KDM5A-209ENST00000543507 AFDNP55196 1824 aaKnown RBP28.11■■■□□ 2.09
KDM5A-209ENST00000543507 PRAMEF22A3QJZ6 481 aa28.1■■■□□ 2.09
KDM5A-209ENST00000543507 PDE6BP35913 854 aa28.1■■■□□ 2.09
KDM5A-209ENST00000543507 ARFGEF1Q9Y6D6 1849 aa28.1■■■□□ 2.09
KDM5A-209ENST00000543507 BRIP1Q9BX63 1249 aa28.09■■■□□ 2.09
KDM5A-209ENST00000543507 BABAM1Q9NWV8 329 aa28.09■■■□□ 2.09
KDM5A-209ENST00000543507 EIF4A1P60842 406 aaKnown RBP28.07■■■□□ 2.08
KDM5A-209ENST00000543507 ST5P78524 1137 aa28.07■■■□□ 2.08
KDM5A-209ENST00000543507 C2CD5Q86YS7 1000 aa28.07■■■□□ 2.08
KDM5A-209ENST00000543507 TTLL6Q8N841 843 aa28.07■■■□□ 2.08
KDM5A-209ENST00000543507 TMPOP42166 694 aaKnown RBP28.06■■■□□ 2.08
KDM5A-209ENST00000543507 CNBD1Q8NA66 436 aa28.06■■■□□ 2.08
KDM5A-209ENST00000543507 KDM3BQ7LBC6 1761 aa28.05■■■□□ 2.08
KDM5A-209ENST00000543507 PRKRIP1Q9H875 184 aaPredicted RBP28.05■■■□□ 2.08
KDM5A-209ENST00000543507 TSPYL4Q9UJ04 414 aa28.05■■■□□ 2.08
KDM5A-209ENST00000543507 GOLGB1Q14789 3259 aaKnown RBP28.04■■■□□ 2.08
KDM5A-209ENST00000543507 PIP4K2AP48426 406 aaPredicted RBP28.04■■■□□ 2.08
KDM5A-209ENST00000543507 PRR5LQ6MZQ0 368 aa28.04■■■□□ 2.08
KDM5A-209ENST00000543507 RUNDC1Q96C34 613 aa28.04■■■□□ 2.08
KDM5A-209ENST00000543507 THUMPD2Q9BTF0 503 aaKnown RBP28.04■■■□□ 2.08
KDM5A-209ENST00000543507 NBPF26B4DH59 902 aa28.03■■■□□ 2.08
KDM5A-209ENST00000543507 NBPF10Q6P3W6 841 aaKnown RBP28.03■■■□□ 2.08
KDM5A-209ENST00000543507 NBPF15Q8N660 670 aa28.03■■■□□ 2.08
KDM5A-209ENST00000543507 ZNF526Q8TF50 670 aaPredicted RBP28.03■■■□□ 2.08
KDM5A-209ENST00000543507 BCORQ6W2J9 1755 aa28.03■■■□□ 2.08
KDM5A-209ENST00000543507 LAMB4A4D0S4 1761 aa28.02■■■□□ 2.08
KDM5A-209ENST00000543507 ERBB4Q15303 1308 aa28.01■■■□□ 2.07
KDM5A-209ENST00000543507 C9orf131Q5VYM1 1079 aa28■■■□□ 2.07
KDM5A-209ENST00000543507 TPTE2Q6XPS3 522 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms