RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 MRC1P22897 1456 aa17.07■□□□□ 0.32
CACNA2D4-216ENST00000543405 MTHFSP49914 203 aa17.07■□□□□ 0.32
CACNA2D4-216ENST00000543405 AEBP1Q8IUX7 1158 aa17.07■□□□□ 0.32
CACNA2D4-216ENST00000543405 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
CACNA2D4-216ENST00000543405 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
CACNA2D4-216ENST00000543405 VEGFAP15692 232 aaPredicted RBP17.06■□□□□ 0.32
CACNA2D4-216ENST00000543405 NFATC2IPQ8NCF5 419 aa17.06■□□□□ 0.32
CACNA2D4-216ENST00000543405 LMNB1P20700 586 aa17.05■□□□□ 0.32
CACNA2D4-216ENST00000543405 C1orf141Q5JVX7 400 aa17.04■□□□□ 0.32
CACNA2D4-216ENST00000543405 USPL1Q5W0Q7 1092 aa17.04■□□□□ 0.32
CACNA2D4-216ENST00000543405 VIRMAQ69YN4 1812 aaKnown RBP17.04■□□□□ 0.32
CACNA2D4-216ENST00000543405 CCDC88AQ3V6T2 1871 aa17.03■□□□□ 0.32
CACNA2D4-216ENST00000543405 DNAJC10Q8IXB1 793 aa17.03■□□□□ 0.32
CACNA2D4-216ENST00000543405 CARMIL3Q8ND23 1372 aa17.02■□□□□ 0.32
CACNA2D4-216ENST00000543405 POTECB2RU33 542 aa17.02■□□□□ 0.32
CACNA2D4-216ENST00000543405 NFKBIEO00221 500 aa17.02■□□□□ 0.32
CACNA2D4-216ENST00000543405 COL15A1P39059 1388 aa17.02■□□□□ 0.31
CACNA2D4-216ENST00000543405 NFIXQ14938 502 aa17.01■□□□□ 0.31
CACNA2D4-216ENST00000543405 UBR2Q8IWV8 1755 aa17.01■□□□□ 0.31
CACNA2D4-216ENST00000543405 ZPR1O75312 459 aa17■□□□□ 0.31
CACNA2D4-216ENST00000543405 CYP19A1P11511 503 aaPredicted RBP17■□□□□ 0.31
CACNA2D4-216ENST00000543405 ANKRD31Q8N7Z5 1873 aa17■□□□□ 0.31
CACNA2D4-216ENST00000543405 BCL2L12Q9HB09 334 aa17■□□□□ 0.31
CACNA2D4-216ENST00000543405 NARFQ9UHQ1 456 aa17■□□□□ 0.31
CACNA2D4-216ENST00000543405 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
CACNA2D4-216ENST00000543405 SULT6B1Q6IMI4 303 aa16.99■□□□□ 0.31
CACNA2D4-216ENST00000543405 SLC52A2Q9HAB3 445 aa16.99■□□□□ 0.31
CACNA2D4-216ENST00000543405 DICER1Q9UPY3 1922 aaKnown RBP16.99■□□□□ 0.31
CACNA2D4-216ENST00000543405 COL11A2P13942 1736 aaPredicted RBP16.99■□□□□ 0.31
CACNA2D4-216ENST00000543405 IL13P35225 146 aa16.98■□□□□ 0.31
CACNA2D4-216ENST00000543405 AKAP4Q5JQC9 854 aa16.98■□□□□ 0.31
CACNA2D4-216ENST00000543405 TTLL6Q8N841 843 aa16.98■□□□□ 0.31
CACNA2D4-216ENST00000543405 MKRN1Q9UHC7 482 aaKnown RBP16.98■□□□□ 0.31
CACNA2D4-216ENST00000543405 ZBTB1Q9Y2K1 713 aa16.98■□□□□ 0.31
CACNA2D4-216ENST00000543405 FER1L6Q2WGJ9 1857 aa16.98■□□□□ 0.31
CACNA2D4-216ENST00000543405 SCN7AQ01118 1682 aa16.97■□□□□ 0.31
CACNA2D4-216ENST00000543405 PANK3Q9H999 370 aa16.97■□□□□ 0.31
CACNA2D4-216ENST00000543405 CREBZFQ9NS37 354 aa16.97■□□□□ 0.31
CACNA2D4-216ENST00000543405 FOXN1O15353 648 aa16.96■□□□□ 0.31
CACNA2D4-216ENST00000543405 SERPINB2P05120 415 aa16.96■□□□□ 0.31
CACNA2D4-216ENST00000543405 POLR3GLQ9BT43 218 aa16.96■□□□□ 0.31
CACNA2D4-216ENST00000543405 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
CACNA2D4-216ENST00000543405 SLC34A2O95436 690 aa16.95■□□□□ 0.3
CACNA2D4-216ENST00000543405 POTEIP0CG38 1075 aa16.95■□□□□ 0.3
CACNA2D4-216ENST00000543405 POTEJP0CG39 1038 aa16.95■□□□□ 0.3
CACNA2D4-216ENST00000543405 C2CD5Q86YS7 1000 aa16.95■□□□□ 0.3
CACNA2D4-216ENST00000543405 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
CACNA2D4-216ENST00000543405 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
CACNA2D4-216ENST00000543405 SLC39A6Q13433 755 aa16.94■□□□□ 0.3
CACNA2D4-216ENST00000543405 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
CACNA2D4-216ENST00000543405 RNMTO43148 476 aaKnown RBP16.93■□□□□ 0.3
CACNA2D4-216ENST00000543405 CHADLQ6NUI6 762 aa16.93■□□□□ 0.3
CACNA2D4-216ENST00000543405 MORC1Q86VD1 984 aa16.93■□□□□ 0.3
CACNA2D4-216ENST00000543405 DPY19L2Q6NUT2 758 aa16.92■□□□□ 0.3
CACNA2D4-216ENST00000543405 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
CACNA2D4-216ENST00000543405 H0YIN7 160 aa16.91■□□□□ 0.3
CACNA2D4-216ENST00000543405 EIF5P55010 431 aaKnown RBP16.91■□□□□ 0.3
CACNA2D4-216ENST00000543405 ERFEQ4G0M1 354 aa16.91■□□□□ 0.3
CACNA2D4-216ENST00000543405 PRDM10Q9NQV6 1147 aa16.91■□□□□ 0.3
CACNA2D4-216ENST00000543405 PASKQ96RG2 1323 aa16.9■□□□□ 0.3
CACNA2D4-216ENST00000543405 LTBP3Q9NS15 1303 aa16.9■□□□□ 0.3
CACNA2D4-216ENST00000543405 SIPA1L3O60292 1781 aaPredicted RBP16.89■□□□□ 0.3
CACNA2D4-216ENST00000543405 C21orf2O43822 256 aa16.89■□□□□ 0.29
CACNA2D4-216ENST00000543405 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
CACNA2D4-216ENST00000543405 BCORQ6W2J9 1755 aa16.88■□□□□ 0.29
CACNA2D4-216ENST00000543405 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
CACNA2D4-216ENST00000543405 CANXP27824 592 aaKnown RBP16.88■□□□□ 0.29
CACNA2D4-216ENST00000543405 TBC1D9BQ66K14 1250 aa16.88■□□□□ 0.29
CACNA2D4-216ENST00000543405 BICDL1Q6ZP65 573 aa16.88■□□□□ 0.29
CACNA2D4-216ENST00000543405 BRIP1Q9BX63 1249 aa16.88■□□□□ 0.29
CACNA2D4-216ENST00000543405 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
CACNA2D4-216ENST00000543405 SLX4Q8IY92 1834 aa16.88■□□□□ 0.29
CACNA2D4-216ENST00000543405 CACNA1SQ13698 1873 aa16.88■□□□□ 0.29
CACNA2D4-216ENST00000543405 HSPA5P11021 654 aaKnown RBP16.87■□□□□ 0.29
CACNA2D4-216ENST00000543405 CTCFP49711 727 aaPredicted RBP16.87■□□□□ 0.29
CACNA2D4-216ENST00000543405 MTHFSDQ2M296 383 aaKnown RBP16.87■□□□□ 0.29
CACNA2D4-216ENST00000543405 PRR5LQ6MZQ0 368 aa16.87■□□□□ 0.29
CACNA2D4-216ENST00000543405 ZNF622Q969S3 477 aaKnown RBP eCLIP16.87■□□□□ 0.29
CACNA2D4-216ENST00000543405 TAOK3Q9H2K8 898 aa16.87■□□□□ 0.29
CACNA2D4-216ENST00000543405 A0A087WZG4 1122 aa16.86■□□□□ 0.29
CACNA2D4-216ENST00000543405 AMER1Q5JTC6 1135 aaPredicted RBP16.86■□□□□ 0.29
CACNA2D4-216ENST00000543405 SCN4AP35499 1836 aa16.85■□□□□ 0.29
CACNA2D4-216ENST00000543405 HMOX1P09601 288 aa16.85■□□□□ 0.29
CACNA2D4-216ENST00000543405 PDE6BP35913 854 aa16.85■□□□□ 0.29
CACNA2D4-216ENST00000543405 VEGFBP49765 207 aa16.85■□□□□ 0.29
CACNA2D4-216ENST00000543405 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
CACNA2D4-216ENST00000543405 CCDC24Q8N4L8 307 aa16.85■□□□□ 0.29
CACNA2D4-216ENST00000543405 AIDAQ96BJ3 306 aa16.85■□□□□ 0.29
CACNA2D4-216ENST00000543405 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
CACNA2D4-216ENST00000543405 STARD3NLO95772 234 aa16.84■□□□□ 0.29
CACNA2D4-216ENST00000543405 LDHDQ86WU2 507 aa16.84■□□□□ 0.29
CACNA2D4-216ENST00000543405 HEG1Q9ULI3 1381 aa16.84■□□□□ 0.29
CACNA2D4-216ENST00000543405 LBX1P52954 281 aa16.83■□□□□ 0.28
CACNA2D4-216ENST00000543405 FAM161AQ3B820 660 aa16.83■□□□□ 0.28
CACNA2D4-216ENST00000543405 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
CACNA2D4-216ENST00000543405 L3MBTL3Q96JM7 780 aaPredicted RBP16.83■□□□□ 0.28
CACNA2D4-216ENST00000543405 TAF1DQ9H5J8 278 aaPredicted RBP16.83■□□□□ 0.28
CACNA2D4-216ENST00000543405 CLSPNQ9HAW4 1339 aa16.83■□□□□ 0.28
CACNA2D4-216ENST00000543405 WBP1LQ9NX94 342 aa16.83■□□□□ 0.28
CACNA2D4-216ENST00000543405 KNSTRNQ9Y448 316 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms