RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 MPRIPQ6WCQ1 1025 aa16.21■□□□□ 0.19
RPS6KC1-206ENST00000543354 CCP110O43303 1012 aa16.21■□□□□ 0.19
RPS6KC1-206ENST00000543354 ANO6Q4KMQ2 910 aa16.21■□□□□ 0.19
RPS6KC1-206ENST00000543354 TMC6Q7Z403 805 aa16.21■□□□□ 0.19
RPS6KC1-206ENST00000543354 DNAJC25Q9H1X3 360 aa16.21■□□□□ 0.19
RPS6KC1-206ENST00000543354 ANO10Q9NW15 660 aa16.21■□□□□ 0.19
RPS6KC1-206ENST00000543354 PKP1Q13835 747 aa16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 TTC39AQ5SRH9 613 aa16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 USP26Q9BXU7 913 aa16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 KRT32Q14532 448 aa16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 CCDC158Q5M9N0 1113 aa16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 PTGS1P23219 599 aa16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 C14orf93Q9H972 538 aaKnown RBP16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 TBC1D2BQ9UPU7 963 aa16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 USP19O94966 1318 aa16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 KIF21AQ7Z4S6 1674 aa16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 BCORL1Q5H9F3 1711 aa16.2■□□□□ 0.18
RPS6KC1-206ENST00000543354 ECHDC1Q9NTX5 307 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 SART3Q15020 963 aaKnown RBP16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 ARHGAP29Q52LW3 1261 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 DNAAF4Q8WXU2 420 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 DCTPP1Q9H773 170 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 IDH1O75874 414 aaKnown RBP16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 RHPN1Q8TCX5 695 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 CENPHQ9H3R5 247 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 CNNM1Q9NRU3 951 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 ZBTB7BO15156 539 aaPredicted RBP16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 RBM25P49756 843 aaKnown RBP16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 ZC3H6P61129 1189 aaKnown RBP16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 SMARCE1Q969G3 411 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 CEP126Q9P2H0 1117 aa16.19■□□□□ 0.18
RPS6KC1-206ENST00000543354 XBP1P17861 261 aa16.18■□□□□ 0.18
RPS6KC1-206ENST00000543354 CEP135Q66GS9 1140 aa16.18■□□□□ 0.18
RPS6KC1-206ENST00000543354 OSCARQ8IYS5 282 aa16.18■□□□□ 0.18
RPS6KC1-206ENST00000543354 SKILP12757 684 aa16.18■□□□□ 0.18
RPS6KC1-206ENST00000543354 HAND2P61296 217 aa16.18■□□□□ 0.18
RPS6KC1-206ENST00000543354 ARHGAP45Q92619 1136 aa16.18■□□□□ 0.18
RPS6KC1-206ENST00000543354 DDX19AQ9NUU7 478 aaKnown RBP16.18■□□□□ 0.18
RPS6KC1-206ENST00000543354 PZPP20742 1482 aa16.18■□□□□ 0.18
RPS6KC1-206ENST00000543354 LUZP1Q86V48 1076 aa16.18■□□□□ 0.18
RPS6KC1-206ENST00000543354 ERCC4Q92889 916 aaPredicted RBP16.17■□□□□ 0.18
RPS6KC1-206ENST00000543354 BRF1Q92994 677 aa16.17■□□□□ 0.18
RPS6KC1-206ENST00000543354 SNRKQ9NRH2 765 aa16.17■□□□□ 0.18
RPS6KC1-206ENST00000543354 C8orf76Q96K31 380 aa16.17■□□□□ 0.18
RPS6KC1-206ENST00000543354 NOL7Q9UMY1 257 aaKnown RBP16.17■□□□□ 0.18
RPS6KC1-206ENST00000543354 IL16Q14005 1332 aa16.17■□□□□ 0.18
RPS6KC1-206ENST00000543354 G3V3G9 751 aa16.17■□□□□ 0.18
RPS6KC1-206ENST00000543354 DCAF8Q5TAQ9 597 aa16.17■□□□□ 0.18
RPS6KC1-206ENST00000543354 CEP85Q6P2H3 762 aa16.17■□□□□ 0.18
RPS6KC1-206ENST00000543354 UVSSAQ2YD98 709 aa16.16■□□□□ 0.18
RPS6KC1-206ENST00000543354 TRIM22Q8IYM9 498 aa16.16■□□□□ 0.18
RPS6KC1-206ENST00000543354 TMEM63CQ9P1W3 806 aa16.16■□□□□ 0.18
RPS6KC1-206ENST00000543354 PTCD1O75127 700 aaKnown RBP16.16■□□□□ 0.18
RPS6KC1-206ENST00000543354 TOP1P11387 765 aaKnown RBP16.16■□□□□ 0.18
RPS6KC1-206ENST00000543354 FAM200AQ8TCP9 573 aa16.16■□□□□ 0.18
RPS6KC1-206ENST00000543354 POLKQ9UBT6 870 aa16.16■□□□□ 0.18
RPS6KC1-206ENST00000543354 KIF4BQ2VIQ3 1234 aa16.16■□□□□ 0.18
RPS6KC1-206ENST00000543354 BRMS1Q9HCU9 246 aa16.16■□□□□ 0.18
RPS6KC1-206ENST00000543354 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
RPS6KC1-206ENST00000543354 POLR3AO14802 1390 aaPredicted RBP16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 FOXO3O43524 673 aa16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 AK2P54819 239 aa16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 SNW1Q13573 536 aaKnown RBP16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 PTPRCP08575 1304 aa16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 CCDC57Q2TAC2 916 aa16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 SMTNL1A8MU46 457 aa16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 F13A1P00488 732 aa16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 SYT1P21579 422 aa16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 ANTXR1Q9H6X2 564 aa16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 ERBB4Q15303 1308 aa16.15■□□□□ 0.18
RPS6KC1-206ENST00000543354 CBFA2T2O43439 604 aa16.14■□□□□ 0.18
RPS6KC1-206ENST00000543354 GADD45BO75293 160 aaPredicted RBP16.14■□□□□ 0.18
RPS6KC1-206ENST00000543354 ERLIN1O75477 346 aa16.14■□□□□ 0.18
RPS6KC1-206ENST00000543354 CCDC144CPQ8IYA2 1237 aa16.14■□□□□ 0.18
RPS6KC1-206ENST00000543354 MYD88Q99836 296 aa16.14■□□□□ 0.18
RPS6KC1-206ENST00000543354 PA2G4Q9UQ80 394 aaKnown RBP16.14■□□□□ 0.18
RPS6KC1-206ENST00000543354 TCOF1Q13428 1488 aaKnown RBP16.14■□□□□ 0.17
RPS6KC1-206ENST00000543354 EPB41L2O43491 1005 aaKnown RBP16.14■□□□□ 0.17
RPS6KC1-206ENST00000543354 SLC3A2P08195 630 aaKnown RBP16.14■□□□□ 0.17
RPS6KC1-206ENST00000543354 DDX46Q7L014 1031 aaKnown RBP16.14■□□□□ 0.17
RPS6KC1-206ENST00000543354 LMBRD1Q9NUN5 540 aa16.13■□□□□ 0.17
RPS6KC1-206ENST00000543354 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
RPS6KC1-206ENST00000543354 CCDC69A6NI79 296 aa16.13■□□□□ 0.17
RPS6KC1-206ENST00000543354 ATP5J2-PTCD1G3V325 749 aa16.13■□□□□ 0.17
RPS6KC1-206ENST00000543354 TYRO3Q06418 890 aa16.13■□□□□ 0.17
RPS6KC1-206ENST00000543354 DNAI1Q9UI46 699 aa16.13■□□□□ 0.17
RPS6KC1-206ENST00000543354 U3KPZ7 1027 aaPredicted RBP16.13■□□□□ 0.17
RPS6KC1-206ENST00000543354 EIF3JO75822 258 aaKnown RBP16.13■□□□□ 0.17
RPS6KC1-206ENST00000543354 WASLO00401 505 aaPredicted RBP16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 CD2BP2O95400 341 aaKnown RBP16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 G2E3Q7L622 706 aa16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 GOLIM4O00461 696 aa16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 U2AF2P26368 475 aaKnown RBP eCLIP16.12■□□□□ 0.179e-8■■■■□ 20.8
RPS6KC1-206ENST00000543354 DNA2P51530 1060 aa16.12■□□□□ 0.17
RPS6KC1-206ENST00000543354 DEF6Q9H4E7 631 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 391.5 ms