RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 USPL1Q5W0Q7 1092 aa13.09□□□□□ -0.31
C2CD3-219ENST00000542930 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
C2CD3-219ENST00000542930 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
C2CD3-219ENST00000542930 VEGFBP49765 207 aa13.08□□□□□ -0.32
C2CD3-219ENST00000542930 MLLT1Q03111 559 aaPredicted RBP13.08□□□□□ -0.32
C2CD3-219ENST00000542930 ERFEQ4G0M1 354 aa13.08□□□□□ -0.32
C2CD3-219ENST00000542930 INTS5Q6P9B9 1019 aaKnown RBP13.08□□□□□ -0.32
C2CD3-219ENST00000542930 PASKQ96RG2 1323 aa13.08□□□□□ -0.32
C2CD3-219ENST00000542930 CCDC88AQ3V6T2 1871 aa13.08□□□□□ -0.32
C2CD3-219ENST00000542930 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
C2CD3-219ENST00000542930 H0YIN7 160 aa13.07□□□□□ -0.32
C2CD3-219ENST00000542930 NFIXQ14938 502 aa13.07□□□□□ -0.32
C2CD3-219ENST00000542930 C2CD5Q86YS7 1000 aa13.07□□□□□ -0.32
C2CD3-219ENST00000542930 DLEC1Q9Y238 1755 aa13.07□□□□□ -0.32
C2CD3-219ENST00000542930 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
C2CD3-219ENST00000542930 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
C2CD3-219ENST00000542930 SERPINB2P05120 415 aa13.06□□□□□ -0.32
C2CD3-219ENST00000542930 RGS19P49795 217 aa13.06□□□□□ -0.32
C2CD3-219ENST00000542930 EIF4A2Q14240 407 aaKnown RBP13.06□□□□□ -0.32
C2CD3-219ENST00000542930 PLEKHO1Q53GL0 409 aaPredicted RBP13.06□□□□□ -0.32
C2CD3-219ENST00000542930 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
C2CD3-219ENST00000542930 AFDNP55196 1824 aaKnown RBP13.05□□□□□ -0.32
C2CD3-219ENST00000542930 DDNO94850 711 aaPredicted RBP13.05□□□□□ -0.32
C2CD3-219ENST00000542930 HSPA8P11142 646 aaKnown RBP13.05□□□□□ -0.32
C2CD3-219ENST00000542930 LDHDQ86WU2 507 aa13.05□□□□□ -0.32
C2CD3-219ENST00000542930 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
C2CD3-219ENST00000542930 CARD14Q9BXL6 1004 aa13.05□□□□□ -0.32
C2CD3-219ENST00000542930 POLKQ9UBT6 870 aa13.05□□□□□ -0.32
C2CD3-219ENST00000542930 NARFQ9UHQ1 456 aa13.05□□□□□ -0.32
C2CD3-219ENST00000542930 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
C2CD3-219ENST00000542930 MTHFSP49914 203 aa13.04□□□□□ -0.32
C2CD3-219ENST00000542930 AMOTQ4VCS5 1084 aa13.04□□□□□ -0.32
C2CD3-219ENST00000542930 ZNF530Q6P9A1 599 aaPredicted RBP13.04□□□□□ -0.32
C2CD3-219ENST00000542930 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
C2CD3-219ENST00000542930 TJP1Q07157 1748 aa13.03□□□□□ -0.32
C2CD3-219ENST00000542930 C21orf2O43822 256 aa13.03□□□□□ -0.32
C2CD3-219ENST00000542930 ITGBL1O95965 494 aaPredicted RBP13.03□□□□□ -0.32
C2CD3-219ENST00000542930 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
C2CD3-219ENST00000542930 CDCA8Q53HL2 280 aa13.03□□□□□ -0.32
C2CD3-219ENST00000542930 VIRMAQ69YN4 1812 aaKnown RBP13.03□□□□□ -0.32
C2CD3-219ENST00000542930 LTBP3Q9NS15 1303 aa13.03□□□□□ -0.32
C2CD3-219ENST00000542930 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
C2CD3-219ENST00000542930 RASSF10A6NK89 507 aa13.02□□□□□ -0.33
C2CD3-219ENST00000542930 CCDC85CA6NKD9 419 aa13.02□□□□□ -0.33
C2CD3-219ENST00000542930 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.33
C2CD3-219ENST00000542930 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.33
C2CD3-219ENST00000542930 TAOK3Q9H2K8 898 aa13.02□□□□□ -0.33
C2CD3-219ENST00000542930 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.33
C2CD3-219ENST00000542930 CARMIL3Q8ND23 1372 aa13.02□□□□□ -0.33
C2CD3-219ENST00000542930 DEFB115Q30KQ5 88 aa13.01□□□□□ -0.33
C2CD3-219ENST00000542930 C1orf141Q5JVX7 400 aa13.01□□□□□ -0.33
C2CD3-219ENST00000542930 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.33
C2CD3-219ENST00000542930 TAF1DQ9H5J8 278 aaPredicted RBP13.01□□□□□ -0.33
C2CD3-219ENST00000542930 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
C2CD3-219ENST00000542930 COL15A1P39059 1388 aa13.01□□□□□ -0.33
C2CD3-219ENST00000542930 FER1L6Q2WGJ9 1857 aa13□□□□□ -0.33
C2CD3-219ENST00000542930 CYP19A1P11511 503 aaPredicted RBP13□□□□□ -0.33
C2CD3-219ENST00000542930 PDE6BP35913 854 aa13□□□□□ -0.33
C2CD3-219ENST00000542930 BRIP1Q9BX63 1249 aa13□□□□□ -0.33
C2CD3-219ENST00000542930 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
C2CD3-219ENST00000542930 TNRC18O15417 2968 aaPredicted RBP12.99□□□□□ -0.33
C2CD3-219ENST00000542930 WDR33Q9C0J8 1336 aaKnown RBP12.99□□□□□ -0.33
C2CD3-219ENST00000542930 SCN4AP35499 1836 aa12.99□□□□□ -0.33
C2CD3-219ENST00000542930 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
C2CD3-219ENST00000542930 EAPPQ56P03 285 aaPredicted RBP12.97□□□□□ -0.33
C2CD3-219ENST00000542930 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
C2CD3-219ENST00000542930 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
C2CD3-219ENST00000542930 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
C2CD3-219ENST00000542930 CNKSR1Q969H4 720 aa12.96□□□□□ -0.33
C2CD3-219ENST00000542930 BEGAINQ9BUH8 593 aa12.96□□□□□ -0.33
C2CD3-219ENST00000542930 HACL1Q9UJ83 578 aa12.96□□□□□ -0.33
C2CD3-219ENST00000542930 TNNT2P45379 298 aaPredicted RBP12.95□□□□□ -0.34
C2CD3-219ENST00000542930 PRR5LQ6MZQ0 368 aa12.95□□□□□ -0.34
C2CD3-219ENST00000542930 PNMA8AQ86V59 439 aaPredicted RBP12.95□□□□□ -0.34
C2CD3-219ENST00000542930 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
C2CD3-219ENST00000542930 SLC52A2Q9HAB3 445 aa12.95□□□□□ -0.34
C2CD3-219ENST00000542930 ABT1Q9ULW3 272 aaKnown RBP12.95□□□□□ -0.34
C2CD3-219ENST00000542930 ANKRD31Q8N7Z5 1873 aa12.94□□□□□ -0.34
C2CD3-219ENST00000542930 EPHX2P34913 555 aa12.94□□□□□ -0.34
C2CD3-219ENST00000542930 TBC1D9BQ66K14 1250 aa12.94□□□□□ -0.34
C2CD3-219ENST00000542930 MAP1SQ66K74 1059 aaPredicted RBP12.94□□□□□ -0.34
C2CD3-219ENST00000542930 STYK1Q6J9G0 422 aa12.94□□□□□ -0.34
C2CD3-219ENST00000542930 PRPF40BQ6NWY9 871 aaKnown RBP12.94□□□□□ -0.34
C2CD3-219ENST00000542930 AEBP1Q8IUX7 1158 aa12.94□□□□□ -0.34
C2CD3-219ENST00000542930 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
C2CD3-219ENST00000542930 ADAMTSL1Q8N6G6 1762 aa12.94□□□□□ -0.34
C2CD3-219ENST00000542930 A0A087WZG4 1122 aa12.93□□□□□ -0.34
C2CD3-219ENST00000542930 SRGNP10124 158 aa12.93□□□□□ -0.34
C2CD3-219ENST00000542930 CANXP27824 592 aaKnown RBP12.93□□□□□ -0.34
C2CD3-219ENST00000542930 EIF5P55010 431 aaKnown RBP12.93□□□□□ -0.34
C2CD3-219ENST00000542930 SLC39A6Q13433 755 aa12.93□□□□□ -0.34
C2CD3-219ENST00000542930 AKAP4Q5JQC9 854 aa12.93□□□□□ -0.34
C2CD3-219ENST00000542930 CCDC24Q8N4L8 307 aa12.93□□□□□ -0.34
C2CD3-219ENST00000542930 SCN11AQ9UI33 1791 aa12.92□□□□□ -0.34
C2CD3-219ENST00000542930 COL11A2P13942 1736 aaPredicted RBP12.92□□□□□ -0.34
C2CD3-219ENST00000542930 ECE1P42892 770 aa12.92□□□□□ -0.34
C2CD3-219ENST00000542930 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
C2CD3-219ENST00000542930 CFAP44Q96MT7 982 aa12.92□□□□□ -0.34
C2CD3-219ENST00000542930 DDX21Q9NR30 783 aaKnown RBP eCLIP12.92□□□□□ -0.34
C2CD3-219ENST00000542930 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms