RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 PRIM1P49642 420 aaKnown RBP16.89■□□□□ 0.29
CHFR-221ENST00000542714 FLIIQ13045 1269 aa16.89■□□□□ 0.29
CHFR-221ENST00000542714 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
CHFR-221ENST00000542714 ANXA1P04083 346 aa16.88■□□□□ 0.29
CHFR-221ENST00000542714 PDIA6Q15084 440 aa16.88■□□□□ 0.29
CHFR-221ENST00000542714 ITPRIPQ8IWB1 547 aa16.88■□□□□ 0.29
CHFR-221ENST00000542714 CCDC136Q96JN2 1154 aa16.88■□□□□ 0.29
CHFR-221ENST00000542714 CHMP4AQ9BY43 222 aa16.88■□□□□ 0.29
CHFR-221ENST00000542714 PHAXQ9H814 394 aaKnown RBP16.88■□□□□ 0.29
CHFR-221ENST00000542714 QTRT2Q9H974 415 aaKnown RBP16.88■□□□□ 0.29
CHFR-221ENST00000542714 BTAF1O14981 1849 aa16.87■□□□□ 0.29
CHFR-221ENST00000542714 ACSBG1Q96GR2 724 aa16.87■□□□□ 0.29
CHFR-221ENST00000542714 DBF4Q9UBU7 674 aaPredicted RBP16.87■□□□□ 0.29
CHFR-221ENST00000542714 USP16Q9Y5T5 823 aa16.87■□□□□ 0.29
CHFR-221ENST00000542714 PXDNLA1KZ92 1463 aa16.86■□□□□ 0.29
CHFR-221ENST00000542714 A0A0G2JS52 829 aa16.86■□□□□ 0.29
CHFR-221ENST00000542714 PTCD1O75127 700 aaKnown RBP16.86■□□□□ 0.29
CHFR-221ENST00000542714 MYT1Q01538 1121 aa16.86■□□□□ 0.29
CHFR-221ENST00000542714 INTS3Q68E01 1043 aaKnown RBP16.86■□□□□ 0.29
CHFR-221ENST00000542714 DDX19BQ9UMR2 479 aa16.86■□□□□ 0.29
CHFR-221ENST00000542714 F6X3S4 739 aa16.85■□□□□ 0.29
CHFR-221ENST00000542714 LRP10Q7Z4F1 713 aa16.85■□□□□ 0.29
CHFR-221ENST00000542714 SYTL4Q96C24 671 aaPredicted RBP16.85■□□□□ 0.29
CHFR-221ENST00000542714 DDX21Q9NR30 783 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHFR-221ENST00000542714 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
CHFR-221ENST00000542714 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
CHFR-221ENST00000542714 ARFGEF2Q9Y6D5 1785 aa16.84■□□□□ 0.29
CHFR-221ENST00000542714 FKBP5Q13451 457 aaPredicted RBP16.84■□□□□ 0.29
CHFR-221ENST00000542714 AAMPQ13685 434 aa16.84■□□□□ 0.29
CHFR-221ENST00000542714 SEPT12Q8IYM1 358 aa16.84■□□□□ 0.29
CHFR-221ENST00000542714 SLC4A9Q96Q91 983 aa16.84■□□□□ 0.29
CHFR-221ENST00000542714 RREB1Q92766 1687 aa16.84■□□□□ 0.29
CHFR-221ENST00000542714 KCNQ2O43526 872 aa16.83■□□□□ 0.28
CHFR-221ENST00000542714 ADCY9O60503 1353 aa16.83■□□□□ 0.28
CHFR-221ENST00000542714 COL5A3P25940 1745 aaPredicted RBP16.83■□□□□ 0.28
CHFR-221ENST00000542714 ZBTB40Q9NUA8 1239 aa16.83■□□□□ 0.28
CHFR-221ENST00000542714 HYPKQ9NX55 129 aa16.83■□□□□ 0.28
CHFR-221ENST00000542714 ERBB4Q15303 1308 aa16.82■□□□□ 0.28
CHFR-221ENST00000542714 KDM2BQ8NHM5 1336 aa16.82■□□□□ 0.28
CHFR-221ENST00000542714 ZBTB7BO15156 539 aaPredicted RBP16.82■□□□□ 0.28
CHFR-221ENST00000542714 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
CHFR-221ENST00000542714 PCDHB15Q9Y5E8 787 aa16.82■□□□□ 0.28
CHFR-221ENST00000542714 NBPF26B4DH59 902 aa16.81■□□□□ 0.28
CHFR-221ENST00000542714 PIP4K2AP48426 406 aaPredicted RBP16.81■□□□□ 0.28
CHFR-221ENST00000542714 NBPF14Q5TI25 921 aa16.81■□□□□ 0.28
CHFR-221ENST00000542714 ZNF772Q68DY9 489 aaPredicted RBP16.81■□□□□ 0.28
CHFR-221ENST00000542714 NBPF10Q6P3W6 841 aaKnown RBP16.81■□□□□ 0.28
CHFR-221ENST00000542714 DNAJC10Q8IXB1 793 aa16.81■□□□□ 0.28
CHFR-221ENST00000542714 NBPF15Q8N660 670 aa16.81■□□□□ 0.28
CHFR-221ENST00000542714 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
CHFR-221ENST00000542714 LY75O60449 1722 aa16.8■□□□□ 0.28
CHFR-221ENST00000542714 FAM182BQ5T319 152 aa16.8■□□□□ 0.28
CHFR-221ENST00000542714 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
CHFR-221ENST00000542714 ATP10DQ9P241 1426 aa16.79■□□□□ 0.28
CHFR-221ENST00000542714 MYL6BP14649 208 aa16.79■□□□□ 0.28
CHFR-221ENST00000542714 CCT4P50991 539 aaKnown RBP16.79■□□□□ 0.28
CHFR-221ENST00000542714 SLC4A10Q6U841 1118 aa16.79■□□□□ 0.28
CHFR-221ENST00000542714 AFDNP55196 1824 aaKnown RBP16.79■□□□□ 0.28
CHFR-221ENST00000542714 PALLDQ8WX93 1383 aa16.78■□□□□ 0.28
CHFR-221ENST00000542714 PI4KAP2A4QPH2 592 aa16.78■□□□□ 0.28
CHFR-221ENST00000542714 A1BGP04217 495 aa16.78■□□□□ 0.28
CHFR-221ENST00000542714 PI4KAP1Q8N8J0 262 aa16.78■□□□□ 0.28
CHFR-221ENST00000542714 XAGE3Q8WTP9 111 aa16.78■□□□□ 0.28
CHFR-221ENST00000542714 DNAAF4Q8WXU2 420 aa16.78■□□□□ 0.28
CHFR-221ENST00000542714 MYH14Q7Z406 1995 aaKnown RBP16.78■□□□□ 0.28
CHFR-221ENST00000542714 IGHDP01880 384 aa16.77■□□□□ 0.28
CHFR-221ENST00000542714 RBM6P78332 1123 aaKnown RBP16.77■□□□□ 0.28
CHFR-221ENST00000542714 KSR2Q6VAB6 950 aa16.77■□□□□ 0.28
CHFR-221ENST00000542714 TEX13AQ9BXU3 409 aaPredicted RBP16.77■□□□□ 0.28
CHFR-221ENST00000542714 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
CHFR-221ENST00000542714 TAF1LQ8IZX4 1826 aa16.76■□□□□ 0.27
CHFR-221ENST00000542714 CYP19A1P11511 503 aaPredicted RBP16.76■□□□□ 0.27
CHFR-221ENST00000542714 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
CHFR-221ENST00000542714 BEND3Q5T5X7 828 aa16.76■□□□□ 0.27
CHFR-221ENST00000542714 COPS6Q7L5N1 327 aa16.76■□□□□ 0.27
CHFR-221ENST00000542714 MEIS3Q99687 375 aa16.76■□□□□ 0.27
CHFR-221ENST00000542714 MAP3K2Q9Y2U5 619 aa16.76■□□□□ 0.27
CHFR-221ENST00000542714 SMARCC1Q92922 1105 aaPredicted RBP16.75■□□□□ 0.27
CHFR-221ENST00000542714 CHMP4BQ9H444 224 aaKnown RBP16.75■□□□□ 0.27
CHFR-221ENST00000542714 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
CHFR-221ENST00000542714 LOC102724428A0A0B4J2F2 783 aa16.74■□□□□ 0.27
CHFR-221ENST00000542714 SIK1P57059 783 aa16.74■□□□□ 0.27
CHFR-221ENST00000542714 ITPK1Q13572 414 aa16.74■□□□□ 0.27
CHFR-221ENST00000542714 CENPQQ7L2Z9 268 aaPredicted RBP16.74■□□□□ 0.27
CHFR-221ENST00000542714 STARD3NLO95772 234 aa16.73■□□□□ 0.27
CHFR-221ENST00000542714 DDX58O95786 925 aaKnown RBP16.73■□□□□ 0.27
CHFR-221ENST00000542714 TTLL7Q6ZT98 887 aa16.73■□□□□ 0.27
CHFR-221ENST00000542714 KRT27Q7Z3Y8 459 aa16.73■□□□□ 0.27
CHFR-221ENST00000542714 SRCIN1Q9C0H9 1055 aa16.73■□□□□ 0.27
CHFR-221ENST00000542714 ANKRD36CQ5JPF3 1778 aa16.72■□□□□ 0.27
CHFR-221ENST00000542714 ALDH1L1O75891 902 aa16.71■□□□□ 0.27
CHFR-221ENST00000542714 ATP6V1AP38606 617 aa16.71■□□□□ 0.27
CHFR-221ENST00000542714 HDAC1Q13547 482 aaPredicted RBP16.71■□□□□ 0.27
CHFR-221ENST00000542714 POTEAQ6S8J7 498 aa16.71■□□□□ 0.27
CHFR-221ENST00000542714 ANKRD13DQ6ZTN6 518 aa16.71■□□□□ 0.27
CHFR-221ENST00000542714 SIRT2Q8IXJ6 389 aa16.71■□□□□ 0.27
CHFR-221ENST00000542714 METTL22Q9BUU2 404 aaPredicted RBP16.71■□□□□ 0.27
CHFR-221ENST00000542714 USP44Q9H0E7 712 aa16.71■□□□□ 0.27
CHFR-221ENST00000542714 ZBTB1Q9Y2K1 713 aa16.71■□□□□ 0.27
CHFR-221ENST00000542714 IBTKQ9P2D0 1353 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 854.3 ms